Protein–RNA interactions for Protein: Q16798

ME3, NADP-dependent malic enzyme, mitochondrial, humanhuman

Predictions only

Length 604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME3Q16798 MIR4460-201ENST00000577862 86 ntBASIC0.16□□□□□ -2.38
ME3Q16798 MIR2052-201ENST00000636055 55 ntBASIC0.16□□□□□ -2.38
ME3Q16798 MIR499B-201ENST00000636498 73 ntBASIC0.16□□□□□ -2.38
ME3Q16798 Y_RNA.125-201ENST00000363371 111 ntBASIC0.15□□□□□ -2.39
ME3Q16798 MIR1197-201ENST00000408818 88 ntBASIC0.15□□□□□ -2.39
ME3Q16798 HMGN2P22-201ENST00000427588 175 ntBASIC0.15□□□□□ -2.39
ME3Q16798 SNORD4B-201ENST00000459083 72 ntBASIC0.15□□□□□ -2.39
ME3Q16798 AC023932.2-201ENST00000603176 175 ntBASIC0.15□□□□□ -2.39
ME3Q16798 SNORA63.4-201ENST00000362763 126 ntBASIC0.14□□□□□ -2.39
ME3Q16798 MT-TY-201ENST00000387409 66 ntBASIC0.14□□□□□ -2.39
ME3Q16798 MIR548U-201ENST00000390728 81 ntBASIC0.14□□□□□ -2.39
ME3Q16798 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
ME3Q16798 SNORA25.13-201ENST00000516395 103 ntBASIC0.14□□□□□ -2.39
ME3Q16798 RNU6-782P-201ENST00000516852 104 ntBASIC0.14□□□□□ -2.39
ME3Q16798 MIR4677-201ENST00000584153 80 ntBASIC0.14□□□□□ -2.39
ME3Q16798 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.14□□□□□ -2.39
ME3Q16798 MIRLET7F1-201ENST00000362202 87 ntBASIC0.13□□□□□ -2.39
ME3Q16798 RNA5SP457-201ENST00000363657 124 ntBASIC0.13□□□□□ -2.39
ME3Q16798 MTATP8P2-201ENST00000435212 202 ntBASIC0.13□□□□□ -2.39
ME3Q16798 U7.3-201ENST00000616123 62 ntBASIC0.13□□□□□ -2.39
ME3Q16798 RNU6-652P-201ENST00000365488 107 ntBASIC0.12□□□□□ -2.39
ME3Q16798 MIR451A-201ENST00000385059 72 ntBASIC0.12□□□□□ -2.39
ME3Q16798 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
ME3Q16798 Y_RNA.677-201ENST00000516401 85 ntBASIC0.12□□□□□ -2.39
ME3Q16798 AL109933.3-201ENST00000619095 188 ntBASIC0.12□□□□□ -2.39
ME3Q16798 RNU6-32P-201ENST00000383948 107 ntBASIC0.11□□□□□ -2.39
ME3Q16798 RNU6-811P-201ENST00000384069 107 ntBASIC0.11□□□□□ -2.39
ME3Q16798 RNU6-13P-201ENST00000384248 107 ntBASIC0.11□□□□□ -2.39
ME3Q16798 RNU6-12P-201ENST00000384604 107 ntBASIC0.11□□□□□ -2.39
ME3Q16798 RNU6-41P-201ENST00000384741 107 ntBASIC0.11□□□□□ -2.39
ME3Q16798 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.11□□□□□ -2.39
ME3Q16798 YWHAEP2-201ENST00000580066 112 ntBASIC0.11□□□□□ -2.39
ME3Q16798 MIR3064-201ENST00000581130 66 ntBASIC0.11□□□□□ -2.39
ME3Q16798 AC104996.3-201ENST00000590718 94 ntBASIC0.11□□□□□ -2.39
ME3Q16798 AP001318.4-201ENST00000616637 121 ntBASIC0.11□□□□□ -2.39
ME3Q16798 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
ME3Q16798 RNU6-132P-201ENST00000383863 107 ntBASIC0.1□□□□□ -2.39
ME3Q16798 RNU6-147P-201ENST00000383983 107 ntBASIC0.1□□□□□ -2.39
ME3Q16798 RNU6-44P-201ENST00000384045 107 ntBASIC0.1□□□□□ -2.39
ME3Q16798 MIR610-201ENST00000385139 96 ntBASIC0.1□□□□□ -2.39
ME3Q16798 MIR643-201ENST00000385267 97 ntBASIC0.1□□□□□ -2.39
ME3Q16798 RNA5SP63-201ENST00000391225 112 ntBASIC0.1□□□□□ -2.39
ME3Q16798 U3.27-201ENST00000391237 200 ntBASIC0.1□□□□□ -2.39
ME3Q16798 MIR892B-201ENST00000401279 77 ntBASIC0.1□□□□□ -2.39
ME3Q16798 MIR4743-201ENST00000584576 69 ntBASIC0.1□□□□□ -2.39
ME3Q16798 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
ME3Q16798 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.1□□□□□ -2.39
ME3Q16798 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.1□□□□□ -2.39
ME3Q16798 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.1□□□□□ -2.39
ME3Q16798 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.39
ME3Q16798 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
ME3Q16798 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
ME3Q16798 SNORA40.13-201ENST00000516379 120 ntBASIC0.09□□□□□ -2.4
ME3Q16798 MIR4473-201ENST00000583731 91 ntBASIC0.09□□□□□ -2.4
ME3Q16798 MIR548O2-201ENST00000616090 70 ntBASIC0.09□□□□□ -2.4
ME3Q16798 RNU6-161P-201ENST00000363051 106 ntBASIC0.08□□□□□ -2.4
ME3Q16798 SNORA75.1-201ENST00000391130 148 ntBASIC0.08□□□□□ -2.4
ME3Q16798 MIR548H2-201ENST00000408874 88 ntBASIC0.08□□□□□ -2.4
ME3Q16798 RNU6-162P-201ENST00000516228 103 ntBASIC0.08□□□□□ -2.4
ME3Q16798 MIR6718-201ENST00000616153 80 ntBASIC0.08□□□□□ -2.4
ME3Q16798 Y_RNA.290-201ENST00000364879 114 ntBASIC0.07□□□□□ -2.4
ME3Q16798 Y_RNA.491-201ENST00000384417 107 ntBASIC0.07□□□□□ -2.4
ME3Q16798 MIR3925-201ENST00000584674 77 ntBASIC0.07□□□□□ -2.4
ME3Q16798 Y_RNA.495-201ENST00000384435 112 ntBASIC0.06□□□□□ -2.4
ME3Q16798 Y_RNA.609-201ENST00000410669 89 ntBASIC0.06□□□□□ -2.4
ME3Q16798 Y_RNA.660-201ENST00000516002 120 ntBASIC0.06□□□□□ -2.4
ME3Q16798 AC026421.1-201ENST00000519101 163 ntBASIC0.06□□□□□ -2.4
ME3Q16798 uc_338.10-201ENST00000621872 182 ntBASIC0.06□□□□□ -2.4
ME3Q16798 Y_RNA.30-201ENST00000362572 97 ntBASIC0.05□□□□□ -2.4
ME3Q16798 RNA5SP257-201ENST00000363023 116 ntBASIC0.05□□□□□ -2.4
ME3Q16798 Y_RNA.348-201ENST00000365403 103 ntBASIC0.05□□□□□ -2.4
ME3Q16798 Y_RNA.407-201ENST00000383986 113 ntBASIC0.05□□□□□ -2.4
ME3Q16798 RNU6V-201ENST00000384105 107 ntBASIC0.05□□□□□ -2.4
ME3Q16798 MIR516B1-201ENST00000385211 90 ntBASIC0.05□□□□□ -2.4
ME3Q16798 MIR876-201ENST00000401147 81 ntBASIC0.05□□□□□ -2.4
ME3Q16798 RNU5B-6P-201ENST00000516765 68 ntBASIC0.05□□□□□ -2.4
ME3Q16798 AC084368.1-201ENST00000620935 65 ntBASIC0.05□□□□□ -2.4
ME3Q16798 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
ME3Q16798 MIR593-201ENST00000384856 100 ntBASIC0.04□□□□□ -2.4
ME3Q16798 SCARNA11.2-201ENST00000517183 154 ntBASIC0.04□□□□□ -2.4
ME3Q16798 MIR2909-201ENST00000617113 69 ntBASIC0.04□□□□□ -2.4
ME3Q16798 SNORA63.2-201ENST00000362603 126 ntBASIC0.03□□□□□ -2.4
ME3Q16798 RNU4-32P-201ENST00000363404 141 ntBASIC0.03□□□□□ -2.4
ME3Q16798 Y_RNA.190-201ENST00000363964 101 ntBASIC0.03□□□□□ -2.4
ME3Q16798 RNA5SP292-201ENST00000390974 118 ntBASIC0.03□□□□□ -2.4
ME3Q16798 FGF7P7-201ENST00000514120 227 ntBASIC0.03□□□□□ -2.4
ME3Q16798 MIR548AE1-201ENST00000583292 70 ntBASIC0.03□□□□□ -2.4
ME3Q16798 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
ME3Q16798 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
ME3Q16798 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
ME3Q16798 MALAT1.1-201ENST00000618249 95 ntBASIC0.02□□□□□ -2.41
ME3Q16798 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
ME3Q16798 Y_RNA.437-201ENST00000384113 113 ntBASIC0.01□□□□□ -2.41
ME3Q16798 SNORA18.5-201ENST00000516616 101 ntBASIC0.01□□□□□ -2.41
ME3Q16798 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
ME3Q16798 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
ME3Q16798 RNU6-640P-201ENST00000363693 105 ntBASIC0□□□□□ -2.41
ME3Q16798 RNY4P3-201ENST00000365254 95 ntBASIC0□□□□□ -2.41
ME3Q16798 RNU6-1051P-201ENST00000365471 102 ntBASIC0□□□□□ -2.41
ME3Q16798 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms