Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RNU1-29P-201ENST00000606574 126 ntBASIC0.28□□□□□ -2.36
EFNB3Q15768 MALAT1.1-201ENST00000618249 95 ntBASIC0.28□□□□□ -2.36
EFNB3Q15768 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
EFNB3Q15768 RNU6-811P-201ENST00000384069 107 ntBASIC0.27□□□□□ -2.37
EFNB3Q15768 MIR6779-201ENST00000617283 64 ntBASIC0.27□□□□□ -2.37
EFNB3Q15768 SNORA9.1-201ENST00000362412 131 ntBASIC0.26□□□□□ -2.37
EFNB3Q15768 RNU4-32P-201ENST00000363404 141 ntBASIC0.26□□□□□ -2.37
EFNB3Q15768 Y_RNA.220-201ENST00000364244 109 ntBASIC0.26□□□□□ -2.37
EFNB3Q15768 RNU6-905P-201ENST00000384434 107 ntBASIC0.26□□□□□ -2.37
EFNB3Q15768 RNU7-129P-201ENST00000516128 62 ntBASIC0.26□□□□□ -2.37
EFNB3Q15768 AC069113.3-201ENST00000521019 150 ntBASIC0.26□□□□□ -2.37
EFNB3Q15768 SNORA70.25-201ENST00000612741 95 ntBASIC0.26□□□□□ -2.37
EFNB3Q15768 RNU6-640P-201ENST00000363693 105 ntBASIC0.25□□□□□ -2.37
EFNB3Q15768 RNA5SP128-201ENST00000365305 116 ntBASIC0.25□□□□□ -2.37
EFNB3Q15768 Y_RNA.491-201ENST00000384417 107 ntBASIC0.25□□□□□ -2.37
EFNB3Q15768 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
EFNB3Q15768 MIR3064-201ENST00000581130 66 ntBASIC0.25□□□□□ -2.37
EFNB3Q15768 AC104996.3-201ENST00000590718 94 ntBASIC0.25□□□□□ -2.37
EFNB3Q15768 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.25□□□□□ -2.37
EFNB3Q15768 RNU6-132P-201ENST00000383863 107 ntBASIC0.24□□□□□ -2.37
EFNB3Q15768 RNU6-815P-201ENST00000384080 113 ntBASIC0.24□□□□□ -2.37
EFNB3Q15768 MIR451A-201ENST00000385059 72 ntBASIC0.24□□□□□ -2.37
EFNB3Q15768 U3.27-201ENST00000391237 200 ntBASIC0.24□□□□□ -2.37
EFNB3Q15768 AC093423.1-201ENST00000440817 142 ntBASIC0.24□□□□□ -2.37
EFNB3Q15768 AC069503.3-201ENST00000618674 145 ntBASIC0.24□□□□□ -2.37
EFNB3Q15768 MIR4315-1-201ENST00000636800 73 ntBASIC0.24□□□□□ -2.37
EFNB3Q15768 MIR924-201ENST00000638017 53 ntBASIC0.24□□□□□ -2.37
EFNB3Q15768 MIR4315-2-201ENST00000640925 73 ntBASIC0.24□□□□□ -2.37
EFNB3Q15768 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
EFNB3Q15768 Y_RNA.205-201ENST00000364128 113 ntBASIC0.23□□□□□ -2.37
EFNB3Q15768 MIR1236-201ENST00000408340 102 ntBASIC0.23□□□□□ -2.37
EFNB3Q15768 FGF7P7-201ENST00000514120 227 ntBASIC0.23□□□□□ -2.37
EFNB3Q15768 YWHAEP2-201ENST00000580066 112 ntBASIC0.23□□□□□ -2.37
EFNB3Q15768 RNY4P3-201ENST00000365254 95 ntBASIC0.22□□□□□ -2.37
EFNB3Q15768 SNORD116-22-201ENST00000384430 92 ntBASIC0.22□□□□□ -2.37
EFNB3Q15768 RNY4P30-201ENST00000410216 95 ntBASIC0.22□□□□□ -2.37
EFNB3Q15768 RNU6-1232P-201ENST00000516299 86 ntBASIC0.22□□□□□ -2.37
EFNB3Q15768 SNORA18.5-201ENST00000516616 101 ntBASIC0.22□□□□□ -2.37
EFNB3Q15768 MIR499B-201ENST00000636498 73 ntBASIC0.22□□□□□ -2.37
EFNB3Q15768 MIR488-201ENST00000365739 83 ntBASIC0.21□□□□□ -2.38
EFNB3Q15768 MT-TY-201ENST00000387409 66 ntBASIC0.21□□□□□ -2.38
EFNB3Q15768 MTATP6P29-201ENST00000415057 132 ntBASIC0.21□□□□□ -2.38
EFNB3Q15768 RNU6-652P-201ENST00000365488 107 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 RNA5SP292-201ENST00000390974 118 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 RNU6-1052P-201ENST00000411398 104 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 RNU6-719P-201ENST00000516671 104 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 Y_RNA.694-201ENST00000516677 117 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 RNU5B-6P-201ENST00000516765 68 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 uc_338.10-201ENST00000621872 182 ntBASIC0.2□□□□□ -2.38
EFNB3Q15768 Y_RNA.125-201ENST00000363371 111 ntBASIC0.19□□□□□ -2.38
EFNB3Q15768 RNU6-1131P-201ENST00000364955 107 ntBASIC0.19□□□□□ -2.38
EFNB3Q15768 RNY1P7-201ENST00000384743 110 ntBASIC0.19□□□□□ -2.38
EFNB3Q15768 MIR548AD-201ENST00000584780 82 ntBASIC0.19□□□□□ -2.38
EFNB3Q15768 MIR8087-201ENST00000612745 78 ntBASIC0.19□□□□□ -2.38
EFNB3Q15768 SNORA63.2-201ENST00000362603 126 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 SNORD115-37-201ENST00000363768 82 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 MIR519C-201ENST00000385053 87 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 MIR501-201ENST00000390204 84 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 HMGN2P22-201ENST00000427588 175 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 SNORA25.13-201ENST00000516395 103 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 MIR4668-201ENST00000582284 70 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 MIR4473-201ENST00000583731 91 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 MIR548O2-201ENST00000616090 70 ntBASIC0.18□□□□□ -2.38
EFNB3Q15768 Y_RNA.258-201ENST00000364613 105 ntBASIC0.17□□□□□ -2.38
EFNB3Q15768 RNU6-1051P-201ENST00000365471 102 ntBASIC0.17□□□□□ -2.38
EFNB3Q15768 RNU6V-201ENST00000384105 107 ntBASIC0.17□□□□□ -2.38
EFNB3Q15768 RNU6-127P-201ENST00000390897 107 ntBASIC0.17□□□□□ -2.38
EFNB3Q15768 MIR4677-201ENST00000584153 80 ntBASIC0.17□□□□□ -2.38
EFNB3Q15768 AC084368.1-201ENST00000620935 65 ntBASIC0.17□□□□□ -2.38
EFNB3Q15768 RNU6-633P-201ENST00000362612 103 ntBASIC0.16□□□□□ -2.38
EFNB3Q15768 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
EFNB3Q15768 Y_RNA.407-201ENST00000383986 113 ntBASIC0.16□□□□□ -2.38
EFNB3Q15768 RNA5SP330-201ENST00000517096 96 ntBASIC0.16□□□□□ -2.38
EFNB3Q15768 RNU6-844P-201ENST00000517175 102 ntBASIC0.16□□□□□ -2.38
EFNB3Q15768 MIR4796-201ENST00000580742 81 ntBASIC0.16□□□□□ -2.38
EFNB3Q15768 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
EFNB3Q15768 MIR3140-201ENST00000583685 90 ntBASIC0.16□□□□□ -2.38
EFNB3Q15768 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
EFNB3Q15768 RNA5SP325-201ENST00000363756 130 ntBASIC0.15□□□□□ -2.39
EFNB3Q15768 RNU6-1134P-201ENST00000365156 101 ntBASIC0.15□□□□□ -2.39
EFNB3Q15768 MIR516B1-201ENST00000385211 90 ntBASIC0.15□□□□□ -2.39
EFNB3Q15768 MIR643-201ENST00000385267 97 ntBASIC0.15□□□□□ -2.39
EFNB3Q15768 RNU6-402P-201ENST00000410678 103 ntBASIC0.15□□□□□ -2.39
EFNB3Q15768 RNU6-782P-201ENST00000516852 104 ntBASIC0.15□□□□□ -2.39
EFNB3Q15768 RNU5F-1-201ENST00000362507 117 ntBASIC0.14□□□□□ -2.39
EFNB3Q15768 Y_RNA.558-201ENST00000384685 113 ntBASIC0.14□□□□□ -2.39
EFNB3Q15768 MIR610-201ENST00000385139 96 ntBASIC0.14□□□□□ -2.39
EFNB3Q15768 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
EFNB3Q15768 Y_RNA.620-201ENST00000411009 88 ntBASIC0.14□□□□□ -2.39
EFNB3Q15768 RNU7-153P-201ENST00000516455 62 ntBASIC0.14□□□□□ -2.39
EFNB3Q15768 RNA5SP214-201ENST00000363378 118 ntBASIC0.13□□□□□ -2.39
EFNB3Q15768 RNA5SP457-201ENST00000363657 124 ntBASIC0.13□□□□□ -2.39
EFNB3Q15768 SNORD114-4-201ENST00000363962 75 ntBASIC0.13□□□□□ -2.39
EFNB3Q15768 Y_RNA.437-201ENST00000384113 113 ntBASIC0.13□□□□□ -2.39
EFNB3Q15768 RNU6-49P-201ENST00000384256 107 ntBASIC0.13□□□□□ -2.39
EFNB3Q15768 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 416.9 ms