Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 Y_RNA.355-201ENST00000365462 98 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 SNORD75.2-201ENST00000408784 58 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 FABP5P4-201ENST00000437203 171 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 AL691482.2-201ENST00000457453 84 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 U7.7-201ENST00000459276 60 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 RNU6-881P-201ENST00000516813 102 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 MIR4639-201ENST00000584938 69 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 AC244669.1-204ENST00000621564 178 ntBASIC1.39□□□□□ -2.19
SOX4Q06945 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SOX4Q06945 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SOX4Q06945 RNU6-495P-201ENST00000362995 107 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 SNORD28-201ENST00000384706 75 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 RNU6-604P-201ENST00000390917 100 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 RNU7-24P-201ENST00000458867 62 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 RNU6-469P-201ENST00000516253 101 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 MIR548O2-201ENST00000616090 70 ntBASIC1.38□□□□□ -2.19
SOX4Q06945 SNORD113.1-201ENST00000363280 73 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 RNU6-630P-201ENST00000391258 106 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 NAMPTP3-201ENST00000569273 224 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 AC005520.4-201ENST00000604337 90 ntBASIC1.36□□□□□ -2.19
SOX4Q06945 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 Y_RNA.205-201ENST00000364128 113 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 SNORD41.1-201ENST00000391000 69 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 RNU7-74P-201ENST00000459104 62 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 snoU13.18-201ENST00000459483 104 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.35□□□□□ -2.19
SOX4Q06945 RNU6-1216P-201ENST00000362590 107 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 RNU6-54P-201ENST00000365563 107 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 RNU6-1039P-201ENST00000383931 107 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 MIR548L-201ENST00000408303 86 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 SNORD124-201ENST00000459577 104 ntBASIC1.34□□□□□ -2.19
SOX4Q06945 SNORD18A-201ENST00000363753 72 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 RNU6-471P-201ENST00000383944 106 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 MIR6509-201ENST00000614603 85 ntBASIC1.33□□□□□ -2.2
SOX4Q06945 RNU6V-201ENST00000384105 107 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 Y_RNA.443-201ENST00000384135 111 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 SNORD116-24-201ENST00000384549 92 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR200A-201ENST00000384875 90 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR489-201ENST00000384923 84 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 RNA5SP47-201ENST00000517230 109 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR3678-201ENST00000578455 94 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
SOX4Q06945 RNU6-726P-201ENST00000364680 107 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 MIR573-201ENST00000384964 99 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 MIR3612-201ENST00000579753 87 ntBASIC1.31□□□□□ -2.2
SOX4Q06945 SNORA25.4-201ENST00000363666 124 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 RNU6-1335P-201ENST00000365426 107 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 MIR203A-201ENST00000384836 110 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 MIR499A-201ENST00000384903 122 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 MIR1276-201ENST00000408707 83 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 AC093423.1-201ENST00000440817 142 ntBASIC1.3□□□□□ -2.2
SOX4Q06945 RNU6-716P-201ENST00000365621 103 ntBASIC1.29□□□□□ -2.2
SOX4Q06945 SNORD42B-201ENST00000458893 67 ntBASIC1.29□□□□□ -2.2
SOX4Q06945 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.29□□□□□ -2.2
SOX4Q06945 AC025627.3-201ENST00000582078 182 ntBASIC1.29□□□□□ -2.2
SOX4Q06945 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SOX4Q06945 MT-TY-201ENST00000387409 66 ntBASIC1.28□□□□□ -2.2
SOX4Q06945 RNU6-982P-201ENST00000516216 102 ntBASIC1.28□□□□□ -2.2
SOX4Q06945 RNA5SP102-201ENST00000516865 106 ntBASIC1.28□□□□□ -2.2
SOX4Q06945 MIR4460-201ENST00000577862 86 ntBASIC1.28□□□□□ -2.2
SOX4Q06945 MIR96-201ENST00000362288 78 ntBASIC1.27□□□□□ -2.21
SOX4Q06945 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
SOX4Q06945 RNU1-141P-201ENST00000364623 158 ntBASIC1.26□□□□□ -2.21
SOX4Q06945 RNU6-260P-201ENST00000384092 107 ntBASIC1.26□□□□□ -2.21
SOX4Q06945 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
SOX4Q06945 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SOX4Q06945 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 RNU6-269P-201ENST00000391077 97 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 SCARNA16.5-201ENST00000517114 183 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 MIR3657-201ENST00000584818 117 ntBASIC1.25□□□□□ -2.21
SOX4Q06945 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.24□□□□□ -2.21
SOX4Q06945 AC073869.9-201ENST00000641610 120 ntBASIC1.24□□□□□ -2.21
SOX4Q06945 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SOX4Q06945 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
SOX4Q06945 SNORD114-27-201ENST00000363766 70 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 SNORA8.2-201ENST00000384372 139 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 RNA5SP255-201ENST00000516370 107 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 RNA5SP480-201ENST00000516840 109 ntBASIC1.23□□□□□ -2.21
SOX4Q06945 MTND4LP1-201ENST00000446263 157 ntBASIC1.22□□□□□ -2.21
SOX4Q06945 AC011195.1-201ENST00000578177 177 ntBASIC1.22□□□□□ -2.21
SOX4Q06945 RNU6-668P-201ENST00000364180 107 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SOX4Q06945 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 SNORD99-201ENST00000408612 74 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 RNU5B-6P-201ENST00000516765 68 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR4511-201ENST00000582784 87 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 AL109933.3-201ENST00000619095 188 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR6828-201ENST00000636181 60 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
SOX4Q06945 MIR18A-201ENST00000362310 71 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms