Protein–RNA interactions for Protein: P78347

GTF2I, General transcription factor II-I, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP78347 RNU6-587P-201ENST00000391282 106 ntBASIC1.48□□□□□ -2.17
GTF2IP78347 MIR548L-201ENST00000408303 86 ntBASIC1.48□□□□□ -2.17
GTF2IP78347 RNA5SP255-201ENST00000516370 107 ntBASIC1.48□□□□□ -2.17
GTF2IP78347 MIR664A-201ENST00000626086 82 ntBASIC1.48□□□□□ -2.17
GTF2IP78347 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
GTF2IP78347 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
GTF2IP78347 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
GTF2IP78347 RNU6-330P-201ENST00000363015 107 ntBASIC1.47□□□□□ -2.17
GTF2IP78347 Y_RNA.540-201ENST00000384638 111 ntBASIC1.47□□□□□ -2.17
GTF2IP78347 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
GTF2IP78347 RNU6-687P-201ENST00000516443 89 ntBASIC1.47□□□□□ -2.17
GTF2IP78347 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
GTF2IP78347 MIR3678-201ENST00000578455 94 ntBASIC1.47□□□□□ -2.17
GTF2IP78347 MIR618-201ENST00000385287 98 ntBASIC1.46□□□□□ -2.18
GTF2IP78347 SNORD41.1-201ENST00000391000 69 ntBASIC1.46□□□□□ -2.18
GTF2IP78347 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.46□□□□□ -2.18
GTF2IP78347 RNU6-274P-201ENST00000459566 107 ntBASIC1.46□□□□□ -2.18
GTF2IP78347 AC114801.3-201ENST00000510231 177 ntBASIC1.46□□□□□ -2.18
GTF2IP78347 RNA5SP47-201ENST00000517230 109 ntBASIC1.46□□□□□ -2.18
GTF2IP78347 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.46□□□□□ -2.18
GTF2IP78347 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
GTF2IP78347 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.46□□□□□ -2.18
GTF2IP78347 MIR4773-1-201ENST00000637203 78 ntBASIC1.46□□□□□ -2.18
GTF2IP78347 MIR3675-201ENST00000583661 73 ntBASIC1.45□□□□□ -2.18
GTF2IP78347 AC022709.1-201ENST00000615967 87 ntBASIC1.45□□□□□ -2.18
GTF2IP78347 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
GTF2IP78347 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
GTF2IP78347 Y_RNA.258-201ENST00000364613 105 ntBASIC1.44□□□□□ -2.18
GTF2IP78347 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
GTF2IP78347 MIR520E-201ENST00000384867 87 ntBASIC1.44□□□□□ -2.18
GTF2IP78347 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
GTF2IP78347 RNU6-634P-201ENST00000459134 106 ntBASIC1.44□□□□□ -2.18
GTF2IP78347 RNU6-752P-201ENST00000516376 102 ntBASIC1.44□□□□□ -2.18
GTF2IP78347 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
GTF2IP78347 RNU6-382P-201ENST00000365181 106 ntBASIC1.43□□□□□ -2.18
GTF2IP78347 RNU6-1241P-201ENST00000384536 107 ntBASIC1.43□□□□□ -2.18
GTF2IP78347 MIR154-201ENST00000385243 84 ntBASIC1.43□□□□□ -2.18
GTF2IP78347 RNA5SP480-201ENST00000516840 109 ntBASIC1.43□□□□□ -2.18
GTF2IP78347 MIR548O2-201ENST00000616090 70 ntBASIC1.43□□□□□ -2.18
GTF2IP78347 MIR6515-201ENST00000619843 57 ntBASIC1.43□□□□□ -2.18
GTF2IP78347 MIR6767-201ENST00000637302 66 ntBASIC1.43□□□□□ -2.18
GTF2IP78347 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
GTF2IP78347 RNU6-726P-201ENST00000364680 107 ntBASIC1.42□□□□□ -2.18
GTF2IP78347 SNORD99-201ENST00000408612 74 ntBASIC1.42□□□□□ -2.18
GTF2IP78347 RPS29P1-201ENST00000465274 159 ntBASIC1.42□□□□□ -2.18
GTF2IP78347 SCARNA16.5-201ENST00000517114 183 ntBASIC1.42□□□□□ -2.18
GTF2IP78347 SNORD75.2-201ENST00000408784 58 ntBASIC1.41□□□□□ -2.18
GTF2IP78347 AC011195.1-201ENST00000578177 177 ntBASIC1.41□□□□□ -2.18
GTF2IP78347 MIR4295-201ENST00000585286 85 ntBASIC1.41□□□□□ -2.18
GTF2IP78347 RNU4-45P-201ENST00000365469 141 ntBASIC1.4□□□□□ -2.19
GTF2IP78347 RNU6-716P-201ENST00000365621 103 ntBASIC1.4□□□□□ -2.19
GTF2IP78347 RNU7-24P-201ENST00000458867 62 ntBASIC1.4□□□□□ -2.19
GTF2IP78347 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
GTF2IP78347 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.4□□□□□ -2.19
GTF2IP78347 AC087343.1-201ENST00000477341 475 ntBASIC1.39□□□□□ -2.19
GTF2IP78347 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.39□□□□□ -2.19
GTF2IP78347 RNU6-495P-201ENST00000362995 107 ntBASIC1.38□□□□□ -2.19
GTF2IP78347 RNU6-788P-201ENST00000390967 104 ntBASIC1.38□□□□□ -2.19
GTF2IP78347 RNU6-539P-201ENST00000516665 103 ntBASIC1.38□□□□□ -2.19
GTF2IP78347 RNU6-1223P-201ENST00000517124 104 ntBASIC1.38□□□□□ -2.19
GTF2IP78347 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
GTF2IP78347 MIR18A-201ENST00000362310 71 ntBASIC1.37□□□□□ -2.19
GTF2IP78347 AC244098.3-201ENST00000424803 96 ntBASIC1.37□□□□□ -2.19
GTF2IP78347 MIR6788-201ENST00000618842 66 ntBASIC1.37□□□□□ -2.19
GTF2IP78347 AC093423.1-201ENST00000440817 142 ntBASIC1.36□□□□□ -2.19
GTF2IP78347 AL691482.2-201ENST00000457453 84 ntBASIC1.36□□□□□ -2.19
GTF2IP78347 MIR151B-201ENST00000584249 96 ntBASIC1.36□□□□□ -2.19
GTF2IP78347 RNU6-54P-201ENST00000365563 107 ntBASIC1.35□□□□□ -2.19
GTF2IP78347 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
GTF2IP78347 MIR548J-201ENST00000408833 112 ntBASIC1.35□□□□□ -2.19
GTF2IP78347 MIR4460-201ENST00000577862 86 ntBASIC1.35□□□□□ -2.19
GTF2IP78347 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.35□□□□□ -2.19
GTF2IP78347 MIR6828-201ENST00000636181 60 ntBASIC1.35□□□□□ -2.19
GTF2IP78347 SNORD114-26-201ENST00000363543 72 ntBASIC1.34□□□□□ -2.19
GTF2IP78347 RNU6V-201ENST00000384105 107 ntBASIC1.34□□□□□ -2.19
GTF2IP78347 MT-TY-201ENST00000387409 66 ntBASIC1.34□□□□□ -2.19
GTF2IP78347 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.34□□□□□ -2.19
GTF2IP78347 MIR8053-201ENST00000613344 75 ntBASIC1.34□□□□□ -2.19
GTF2IP78347 SNORD45.1-201ENST00000363181 77 ntBASIC1.33□□□□□ -2.2
GTF2IP78347 RNU6-590P-201ENST00000365039 107 ntBASIC1.33□□□□□ -2.2
GTF2IP78347 SNORA8.2-201ENST00000384372 139 ntBASIC1.33□□□□□ -2.2
GTF2IP78347 NAMPTP3-201ENST00000569273 224 ntBASIC1.33□□□□□ -2.2
GTF2IP78347 PVT1_3.1-201ENST00000620853 95 ntBASIC1.33□□□□□ -2.2
GTF2IP78347 RNU1-141P-201ENST00000364623 158 ntBASIC1.32□□□□□ -2.2
GTF2IP78347 SNORD115-31-201ENST00000365318 82 ntBASIC1.32□□□□□ -2.2
GTF2IP78347 RNU6-649P-201ENST00000384463 107 ntBASIC1.32□□□□□ -2.2
GTF2IP78347 RNU6-269P-201ENST00000391077 97 ntBASIC1.32□□□□□ -2.2
GTF2IP78347 RNA5SP227-201ENST00000516184 113 ntBASIC1.32□□□□□ -2.2
GTF2IP78347 MIR598-201ENST00000384868 97 ntBASIC1.31□□□□□ -2.2
GTF2IP78347 RNU6-1039P-201ENST00000383931 107 ntBASIC1.3□□□□□ -2.2
GTF2IP78347 RNU6-540P-201ENST00000384622 101 ntBASIC1.3□□□□□ -2.2
GTF2IP78347 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
GTF2IP78347 SNORD30.1-201ENST00000391309 70 ntBASIC1.3□□□□□ -2.2
GTF2IP78347 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.3□□□□□ -2.2
GTF2IP78347 AL353765.1-201ENST00000605514 183 ntBASIC1.3□□□□□ -2.2
GTF2IP78347 AL162376.1-201ENST00000624117 175 ntBASIC1.3□□□□□ -2.2
GTF2IP78347 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
GTF2IP78347 RNA5SP222-201ENST00000411039 105 ntBASIC1.29□□□□□ -2.2
GTF2IP78347 MIR4661-201ENST00000582720 75 ntBASIC1.29□□□□□ -2.2
GTF2IP78347 SNORD114-21-201ENST00000606412 72 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms