Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.43□□□□□ -2.96
CKS1BP61024 AC078883.4-201ENST00000623218 367 ntBASIC-3.43□□□□□ -2.96
CKS1BP61024 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 Y_RNA.166-201ENST00000363730 102 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 Y_RNA.554-201ENST00000384672 102 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 MIR1302-11-201ENST00000408051 138 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 MIR1302-9-201ENST00000408365 138 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 MIR1302-10-201ENST00000408734 138 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 AC113139.1-201ENST00000605049 239 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 MIR1302-2-201ENST00000607096 138 ntBASIC-3.44□□□□□ -2.96
CKS1BP61024 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.45□□□□□ -2.96
CKS1BP61024 RNU2-38P-201ENST00000410856 79 ntBASIC-3.45□□□□□ -2.96
CKS1BP61024 RNU7-88P-201ENST00000458752 63 ntBASIC-3.45□□□□□ -2.96
CKS1BP61024 U7.5-201ENST00000517224 61 ntBASIC-3.45□□□□□ -2.96
CKS1BP61024 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 SNORD50.2-201ENST00000365465 70 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 RNU6-132P-201ENST00000383863 107 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 RNU6-518P-201ENST00000516056 96 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 MIR3688-2-201ENST00000636963 87 ntBASIC-3.46□□□□□ -2.96
CKS1BP61024 RNU6-382P-201ENST00000365181 106 ntBASIC-3.47□□□□□ -2.96
CKS1BP61024 MIR521-2-201ENST00000384818 87 ntBASIC-3.47□□□□□ -2.96
CKS1BP61024 SNORA19.1-201ENST00000410656 129 ntBASIC-3.47□□□□□ -2.96
CKS1BP61024 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.48□□□□□ -2.97
CKS1BP61024 Y_RNA.248-201ENST00000364501 109 ntBASIC-3.48□□□□□ -2.97
CKS1BP61024 MIR3657-201ENST00000584818 117 ntBASIC-3.48□□□□□ -2.97
CKS1BP61024 MIR6509-201ENST00000614603 85 ntBASIC-3.48□□□□□ -2.97
CKS1BP61024 RNU6-363P-201ENST00000362895 105 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-3.49□□□□□ -2.97
CKS1BP61024 AL021921.1-201ENST00000442774 93 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 RNU7-85P-201ENST00000458851 63 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 MIR4748-201ENST00000578076 82 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 AC021753.1-201ENST00000635724 168 ntBASIC-3.49□□□□□ -2.97
CKS1BP61024 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 MT-TI-201ENST00000387365 69 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 MIR548Q-201ENST00000408404 100 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 RNU6-651P-201ENST00000411040 105 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 Y_RNA.797-201ENST00000515977 94 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 MIR3064-201ENST00000581130 66 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 AL442128.1-201ENST00000615151 90 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 AC025521.1-201ENST00000621624 286 ntBASIC-3.5□□□□□ -2.97
CKS1BP61024 SNORD18B-201ENST00000365659 72 ntBASIC-3.51□□□□□ -2.97
CKS1BP61024 SNORD116-29-201ENST00000384516 83 ntBASIC-3.51□□□□□ -2.97
CKS1BP61024 Y_RNA.590-201ENST00000410140 107 ntBASIC-3.51□□□□□ -2.97
CKS1BP61024 MTND4LP32-201ENST00000636111 270 ntBASIC-3.51□□□□□ -2.97
CKS1BP61024 MIR203A-201ENST00000384836 110 ntBASIC-3.52□□□□□ -2.97
CKS1BP61024 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.52□□□□□ -2.97
CKS1BP61024 MIR4282-201ENST00000583613 67 ntBASIC-3.52□□□□□ -2.97
CKS1BP61024 SNORD116-1-201ENST00000384335 95 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 RNU6-246P-201ENST00000384702 107 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 MIR759-201ENST00000390224 91 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 MTND1P29-201ENST00000448112 647 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 RNU6-1338P-201ENST00000516328 91 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 SNORA40.15-201ENST00000516884 107 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.53□□□□□ -2.97
CKS1BP61024 MIR23C-201ENST00000579846 100 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 AC104996.3-201ENST00000590718 94 ntBASIC-3.53□□□□□ -2.97
CKS1BP61024 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.54□□□□□ -2.98
CKS1BP61024 RNU6-409P-201ENST00000384114 104 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 SNORD116-2-201ENST00000384274 95 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU6-768P-201ENST00000384683 107 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU7-152P-201ENST00000458982 64 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 Y_RNA.718-201ENST00000517110 102 ntBASIC-3.55□□□□□ -2.98
CKS1BP61024 RNU6-1009P-201ENST00000390996 107 ntBASIC-3.56□□□□□ -2.98
CKS1BP61024 RNY4-201ENST00000516507 96 ntBASIC-3.56□□□□□ -2.98
CKS1BP61024 RNU6-62P-201ENST00000516526 102 ntBASIC-3.56□□□□□ -2.98
CKS1BP61024 MIR3974-201ENST00000637126 96 ntBASIC-3.56□□□□□ -2.98
CKS1BP61024 SNORA75.5-201ENST00000391291 81 ntBASIC-3.57□□□□□ -2.98
CKS1BP61024 MIR4773-1-201ENST00000637203 78 ntBASIC-3.57□□□□□ -2.98
CKS1BP61024 RNU6-508P-201ENST00000363231 103 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 Y_RNA.213-201ENST00000364178 111 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 RNU6-309P-201ENST00000364573 106 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 MIR3149-201ENST00000584629 83 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 AC002553.4-201ENST00000616896 331 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 U4.5-201ENST00000617137 123 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 U6.106-201ENST00000636360 105 ntBASIC-3.58□□□□□ -2.98
CKS1BP61024 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.59□□□□□ -2.98
CKS1BP61024 RNU6-258P-201ENST00000390884 101 ntBASIC-3.59□□□□□ -2.98
CKS1BP61024 MIR1252-201ENST00000408861 65 ntBASIC-3.59□□□□□ -2.98
CKS1BP61024 RNY3P15-201ENST00000516297 97 ntBASIC-3.59□□□□□ -2.98
CKS1BP61024 Y_RNA.155-201ENST00000363632 101 ntBASIC-3.6□□□□□ -2.99
CKS1BP61024 RNU6-770P-201ENST00000363929 105 ntBASIC-3.6□□□□□ -2.99
CKS1BP61024 AL691482.2-201ENST00000457453 84 ntBASIC-3.6□□□□□ -2.99
CKS1BP61024 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.6□□□□□ -2.99
CKS1BP61024 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.61□□□□□ -2.99
CKS1BP61024 Y_RNA.507-201ENST00000384500 99 ntBASIC-3.61□□□□□ -2.99
CKS1BP61024 MTATP6P29-201ENST00000415057 132 ntBASIC-3.61□□□□□ -2.99
CKS1BP61024 MIR6739-201ENST00000622461 75 ntBASIC-3.61□□□□□ -2.99
CKS1BP61024 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.62□□□□□ -2.99
CKS1BP61024 RNU6-608P-201ENST00000383927 104 ntBASIC-3.62□□□□□ -2.99
CKS1BP61024 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-3.62□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms