Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 MIR7-2-201ENST00000384970 110 ntBASIC1.12□□□□□ -2.23
CHMP4BP1P59074 MIR4698-201ENST00000577795 80 ntBASIC1.12□□□□□ -2.23
CHMP4BP1P59074 AC067863.3-201ENST00000624172 122 ntBASIC1.12□□□□□ -2.23
CHMP4BP1P59074 RNU6-716P-201ENST00000365621 103 ntBASIC1.11□□□□□ -2.23
CHMP4BP1P59074 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CHMP4BP1P59074 SNORD41.1-201ENST00000391000 69 ntBASIC1.11□□□□□ -2.23
CHMP4BP1P59074 MIR3973-201ENST00000579824 107 ntBASIC1.11□□□□□ -2.23
CHMP4BP1P59074 MIR4484-201ENST00000582855 83 ntBASIC1.11□□□□□ -2.23
CHMP4BP1P59074 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
CHMP4BP1P59074 RNU6-469P-201ENST00000516253 101 ntBASIC1.1□□□□□ -2.23
CHMP4BP1P59074 RNA5SP480-201ENST00000516840 109 ntBASIC1.1□□□□□ -2.23
CHMP4BP1P59074 AC211469.2-201ENST00000605461 205 ntBASIC1.1□□□□□ -2.23
CHMP4BP1P59074 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHMP4BP1P59074 MIR598-201ENST00000384868 97 ntBASIC1.09□□□□□ -2.23
CHMP4BP1P59074 MIR617-201ENST00000385030 97 ntBASIC1.09□□□□□ -2.23
CHMP4BP1P59074 SCARNA16.5-201ENST00000517114 183 ntBASIC1.09□□□□□ -2.23
CHMP4BP1P59074 MIR6828-201ENST00000636181 60 ntBASIC1.09□□□□□ -2.23
CHMP4BP1P59074 Y_RNA.12-201ENST00000362393 112 ntBASIC1.08□□□□□ -2.24
CHMP4BP1P59074 RNU6-330P-201ENST00000363015 107 ntBASIC1.08□□□□□ -2.24
CHMP4BP1P59074 AC093423.1-201ENST00000440817 142 ntBASIC1.08□□□□□ -2.24
CHMP4BP1P59074 Y_RNA.660-201ENST00000516002 120 ntBASIC1.08□□□□□ -2.24
CHMP4BP1P59074 RNU6-135P-201ENST00000516769 101 ntBASIC1.08□□□□□ -2.24
CHMP4BP1P59074 RNU6-776P-201ENST00000364403 104 ntBASIC1.07□□□□□ -2.24
CHMP4BP1P59074 RNU6-1022P-201ENST00000365049 104 ntBASIC1.07□□□□□ -2.24
CHMP4BP1P59074 RNU6-269P-201ENST00000391077 97 ntBASIC1.07□□□□□ -2.24
CHMP4BP1P59074 RNA5SP222-201ENST00000411039 105 ntBASIC1.07□□□□□ -2.24
CHMP4BP1P59074 RNA5SP94-201ENST00000516917 108 ntBASIC1.07□□□□□ -2.24
CHMP4BP1P59074 PVT1_3.1-201ENST00000620853 95 ntBASIC1.07□□□□□ -2.24
CHMP4BP1P59074 MIR664A-201ENST00000626086 82 ntBASIC1.07□□□□□ -2.24
CHMP4BP1P59074 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
CHMP4BP1P59074 RNU5F-1-201ENST00000362507 117 ntBASIC1.06□□□□□ -2.24
CHMP4BP1P59074 Y_RNA.371-201ENST00000365591 113 ntBASIC1.06□□□□□ -2.24
CHMP4BP1P59074 AC074348.1-201ENST00000426503 132 ntBASIC1.06□□□□□ -2.24
CHMP4BP1P59074 MIR3134-201ENST00000579433 74 ntBASIC1.06□□□□□ -2.24
CHMP4BP1P59074 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
CHMP4BP1P59074 RNU6-523P-201ENST00000516304 54 ntBASIC1.05□□□□□ -2.24
CHMP4BP1P59074 AC145423.2-201ENST00000610631 239 ntBASIC1.05□□□□□ -2.24
CHMP4BP1P59074 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.05□□□□□ -2.24
CHMP4BP1P59074 RNU6-1094P-201ENST00000362416 104 ntBASIC1.04□□□□□ -2.24
CHMP4BP1P59074 RNU6-340P-201ENST00000364005 107 ntBASIC1.04□□□□□ -2.24
CHMP4BP1P59074 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.04□□□□□ -2.24
CHMP4BP1P59074 YWHAEP2-201ENST00000580066 112 ntBASIC1.04□□□□□ -2.24
CHMP4BP1P59074 YWHAEP3-201ENST00000582767 121 ntBASIC1.04□□□□□ -2.24
CHMP4BP1P59074 MIR7107-201ENST00000611489 80 ntBASIC1.04□□□□□ -2.24
CHMP4BP1P59074 U6.81-201ENST00000612550 106 ntBASIC1.04□□□□□ -2.24
CHMP4BP1P59074 RNY4P3-201ENST00000365254 95 ntBASIC1.03□□□□□ -2.24
CHMP4BP1P59074 RNU6-54P-201ENST00000365563 107 ntBASIC1.03□□□□□ -2.24
CHMP4BP1P59074 U3.27-201ENST00000391237 200 ntBASIC1.03□□□□□ -2.24
CHMP4BP1P59074 RNU6-1057P-201ENST00000517162 102 ntBASIC1.03□□□□□ -2.24
CHMP4BP1P59074 CYP3A137P-201ENST00000562436 69 ntBASIC1.03□□□□□ -2.24
CHMP4BP1P59074 MIR548O2-201ENST00000616090 70 ntBASIC1.03□□□□□ -2.24
CHMP4BP1P59074 Y_RNA.264-201ENST00000364665 102 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 RNU6-382P-201ENST00000365181 106 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 RNU6-154P-201ENST00000384306 106 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 RNU6-1177P-201ENST00000391058 104 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 Y_RNA.606-201ENST00000410579 103 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 AC097510.1-201ENST00000510945 133 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 PSMC1P5-201ENST00000512850 177 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 RNU6-303P-201ENST00000517091 106 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.02□□□□□ -2.25
CHMP4BP1P59074 MIR5000-201ENST00000577717 103 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 AL162376.1-201ENST00000624117 175 ntBASIC1.02□□□□□ -2.25
CHMP4BP1P59074 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
CHMP4BP1P59074 Y_RNA.36-201ENST00000362602 112 ntBASIC1.01□□□□□ -2.25
CHMP4BP1P59074 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
CHMP4BP1P59074 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
CHMP4BP1P59074 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
CHMP4BP1P59074 MIR548L-201ENST00000408303 86 ntBASIC1.01□□□□□ -2.25
CHMP4BP1P59074 RNA5SP484-201ENST00000458857 111 ntBASIC1.01□□□□□ -2.25
CHMP4BP1P59074 RNA5SP268-201ENST00000516828 124 ntBASIC1.01□□□□□ -2.25
CHMP4BP1P59074 NAMPTP3-201ENST00000569273 224 ntBASIC1.01□□□□□ -2.25
CHMP4BP1P59074 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.01□□□□□ -2.25
CHMP4BP1P59074 RNA5SP517-201ENST00000364724 117 ntBASIC1□□□□□ -2.25
CHMP4BP1P59074 RNU6-110P-201ENST00000384508 104 ntBASIC1□□□□□ -2.25
CHMP4BP1P59074 RNU2-59P-201ENST00000410482 191 ntBASIC1□□□□□ -2.25
CHMP4BP1P59074 SNORD42B-201ENST00000458893 67 ntBASIC1□□□□□ -2.25
CHMP4BP1P59074 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
CHMP4BP1P59074 FAS-AS1.1-201ENST00000615327 126 ntBASIC1□□□□□ -2.25
CHMP4BP1P59074 RNA5SP227-201ENST00000516184 113 ntBASIC0.99□□□□□ -2.25
CHMP4BP1P59074 MIR4752-201ENST00000579672 72 ntBASIC0.99□□□□□ -2.25
CHMP4BP1P59074 RNU1-29P-201ENST00000606574 126 ntBASIC0.99□□□□□ -2.25
CHMP4BP1P59074 U7.4-201ENST00000614961 63 ntBASIC0.99□□□□□ -2.25
CHMP4BP1P59074 MIR4662A-201ENST00000637499 67 ntBASIC0.99□□□□□ -2.25
CHMP4BP1P59074 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CHMP4BP1P59074 RNU1-141P-201ENST00000364623 158 ntBASIC0.98□□□□□ -2.25
CHMP4BP1P59074 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
CHMP4BP1P59074 SNORA36.2-201ENST00000384004 127 ntBASIC0.98□□□□□ -2.25
CHMP4BP1P59074 RNU6V-201ENST00000384105 107 ntBASIC0.98□□□□□ -2.25
CHMP4BP1P59074 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CHMP4BP1P59074 MIR6779-201ENST00000617283 64 ntBASIC0.98□□□□□ -2.25
CHMP4BP1P59074 RNU6-1296P-201ENST00000383879 107 ntBASIC0.97□□□□□ -2.25
CHMP4BP1P59074 SNORA8.2-201ENST00000384372 139 ntBASIC0.97□□□□□ -2.25
CHMP4BP1P59074 Y_RNA.540-201ENST00000384638 111 ntBASIC0.97□□□□□ -2.25
CHMP4BP1P59074 Y_RNA.565-201ENST00000384719 101 ntBASIC0.97□□□□□ -2.25
CHMP4BP1P59074 MT-TY-201ENST00000387409 66 ntBASIC0.97□□□□□ -2.25
CHMP4BP1P59074 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CHMP4BP1P59074 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CHMP4BP1P59074 MIR4773-1-201ENST00000637203 78 ntBASIC0.97□□□□□ -2.25
CHMP4BP1P59074 RNU6-495P-201ENST00000362995 107 ntBASIC0.96□□□□□ -2.26
CHMP4BP1P59074 AC018659.1-201ENST00000551083 169 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms