Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MIR6718-201ENST00000616153 80 ntBASIC0.24□□□□□ -2.37
HDAC4P56524 Y_RNA.93-201ENST00000363066 109 ntBASIC0.23□□□□□ -2.37
HDAC4P56524 RNU6-509P-201ENST00000363519 107 ntBASIC0.23□□□□□ -2.37
HDAC4P56524 SNORD101-201ENST00000384027 73 ntBASIC0.23□□□□□ -2.37
HDAC4P56524 RNU6-44P-201ENST00000384045 107 ntBASIC0.23□□□□□ -2.37
HDAC4P56524 RNU6-887P-201ENST00000410660 100 ntBASIC0.23□□□□□ -2.37
HDAC4P56524 AL035461.1-201ENST00000421490 332 ntBASIC0.23□□□□□ -2.37
HDAC4P56524 HMGN2P22-201ENST00000427588 175 ntBASIC0.23□□□□□ -2.37
HDAC4P56524 MIR5706-201ENST00000579841 80 ntBASIC0.23□□□□□ -2.37
HDAC4P56524 RNU6-972P-201ENST00000391208 107 ntBASIC0.22□□□□□ -2.37
HDAC4P56524 Z95118.1-201ENST00000421372 247 ntBASIC0.22□□□□□ -2.37
HDAC4P56524 SNORD4B-201ENST00000459083 72 ntBASIC0.22□□□□□ -2.37
HDAC4P56524 RNU7-74P-201ENST00000459104 62 ntBASIC0.22□□□□□ -2.37
HDAC4P56524 MIR5190-201ENST00000581537 80 ntBASIC0.22□□□□□ -2.37
HDAC4P56524 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.22□□□□□ -2.37
HDAC4P56524 MIR499B-201ENST00000636498 73 ntBASIC0.22□□□□□ -2.37
HDAC4P56524 RNU6-132P-201ENST00000383863 107 ntBASIC0.21□□□□□ -2.38
HDAC4P56524 RNU6-127P-201ENST00000390897 107 ntBASIC0.21□□□□□ -2.38
HDAC4P56524 SNORD110-201ENST00000408189 75 ntBASIC0.21□□□□□ -2.38
HDAC4P56524 RNU7-129P-201ENST00000516128 62 ntBASIC0.21□□□□□ -2.38
HDAC4P56524 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.21□□□□□ -2.38
HDAC4P56524 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
HDAC4P56524 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
HDAC4P56524 MIRLET7F1-201ENST00000362202 87 ntBASIC0.2□□□□□ -2.38
HDAC4P56524 RNA5SP98-201ENST00000363158 137 ntBASIC0.2□□□□□ -2.38
HDAC4P56524 RNU6-147P-201ENST00000383983 107 ntBASIC0.2□□□□□ -2.38
HDAC4P56524 MTATP8P2-201ENST00000435212 202 ntBASIC0.2□□□□□ -2.38
HDAC4P56524 RNU6-158P-201ENST00000517104 100 ntBASIC0.2□□□□□ -2.38
HDAC4P56524 MIR4536-1-201ENST00000583537 88 ntBASIC0.2□□□□□ -2.38
HDAC4P56524 MIR548AD-201ENST00000584780 82 ntBASIC0.2□□□□□ -2.38
HDAC4P56524 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
HDAC4P56524 Y_RNA.544-201ENST00000384650 113 ntBASIC0.19□□□□□ -2.38
HDAC4P56524 MIR548H2-201ENST00000408874 88 ntBASIC0.19□□□□□ -2.38
HDAC4P56524 AC006210.1-201ENST00000424882 111 ntBASIC0.19□□□□□ -2.38
HDAC4P56524 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
HDAC4P56524 U7.3-201ENST00000616123 62 ntBASIC0.19□□□□□ -2.38
HDAC4P56524 Y_RNA.185-201ENST00000363894 100 ntBASIC0.18□□□□□ -2.38
HDAC4P56524 RNU6-162P-201ENST00000516228 103 ntBASIC0.18□□□□□ -2.38
HDAC4P56524 RNU6-65P-201ENST00000516332 98 ntBASIC0.18□□□□□ -2.38
HDAC4P56524 U7.6-201ENST00000610841 64 ntBASIC0.18□□□□□ -2.38
HDAC4P56524 AP001318.4-201ENST00000616637 121 ntBASIC0.18□□□□□ -2.38
HDAC4P56524 Y_RNA.125-201ENST00000363371 111 ntBASIC0.17□□□□□ -2.38
HDAC4P56524 Y_RNA.290-201ENST00000364879 114 ntBASIC0.17□□□□□ -2.38
HDAC4P56524 RNY4P3-201ENST00000365254 95 ntBASIC0.17□□□□□ -2.38
HDAC4P56524 RNU6-935P-201ENST00000410371 100 ntBASIC0.17□□□□□ -2.38
HDAC4P56524 RNA5SP25-201ENST00000410815 110 ntBASIC0.17□□□□□ -2.38
HDAC4P56524 MIR4677-201ENST00000584153 80 ntBASIC0.17□□□□□ -2.38
HDAC4P56524 RNU6-161P-201ENST00000363051 106 ntBASIC0.16□□□□□ -2.38
HDAC4P56524 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
HDAC4P56524 Y_RNA.190-201ENST00000363964 101 ntBASIC0.16□□□□□ -2.38
HDAC4P56524 MT-TY-201ENST00000387409 66 ntBASIC0.16□□□□□ -2.38
HDAC4P56524 AC026421.1-201ENST00000519101 163 ntBASIC0.16□□□□□ -2.38
HDAC4P56524 MIR3064-201ENST00000581130 66 ntBASIC0.16□□□□□ -2.38
HDAC4P56524 MIR4802-201ENST00000581881 80 ntBASIC0.16□□□□□ -2.38
HDAC4P56524 MIR3925-201ENST00000584674 77 ntBASIC0.16□□□□□ -2.38
HDAC4P56524 AC069503.3-201ENST00000618674 145 ntBASIC0.16□□□□□ -2.38
HDAC4P56524 Y_RNA.96-201ENST00000363092 109 ntBASIC0.15□□□□□ -2.39
HDAC4P56524 SNORD116-10-201ENST00000363791 102 ntBASIC0.15□□□□□ -2.39
HDAC4P56524 Y_RNA.348-201ENST00000365403 103 ntBASIC0.15□□□□□ -2.39
HDAC4P56524 RNU6-519P-201ENST00000410590 108 ntBASIC0.15□□□□□ -2.39
HDAC4P56524 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
HDAC4P56524 Y_RNA.239-201ENST00000364444 113 ntBASIC0.14□□□□□ -2.39
HDAC4P56524 MIR451A-201ENST00000385059 72 ntBASIC0.14□□□□□ -2.39
HDAC4P56524 MIR643-201ENST00000385267 97 ntBASIC0.14□□□□□ -2.39
HDAC4P56524 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
HDAC4P56524 RNU6-782P-201ENST00000516852 104 ntBASIC0.14□□□□□ -2.39
HDAC4P56524 MIR4460-201ENST00000577862 86 ntBASIC0.14□□□□□ -2.39
HDAC4P56524 YWHAEP2-201ENST00000580066 112 ntBASIC0.14□□□□□ -2.39
HDAC4P56524 RNA5SP292-201ENST00000390974 118 ntBASIC0.13□□□□□ -2.39
HDAC4P56524 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.13□□□□□ -2.39
HDAC4P56524 SNORA25.13-201ENST00000516395 103 ntBASIC0.13□□□□□ -2.39
HDAC4P56524 RNU5B-6P-201ENST00000516765 68 ntBASIC0.13□□□□□ -2.39
HDAC4P56524 MIR548AE1-201ENST00000583292 70 ntBASIC0.13□□□□□ -2.39
HDAC4P56524 AC104996.3-201ENST00000590718 94 ntBASIC0.13□□□□□ -2.39
HDAC4P56524 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
HDAC4P56524 MIR548O2-201ENST00000616090 70 ntBASIC0.13□□□□□ -2.39
HDAC4P56524 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.13□□□□□ -2.39
HDAC4P56524 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
HDAC4P56524 RNU6-640P-201ENST00000363693 105 ntBASIC0.12□□□□□ -2.39
HDAC4P56524 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
HDAC4P56524 RNU6-905P-201ENST00000384434 107 ntBASIC0.12□□□□□ -2.39
HDAC4P56524 Y_RNA.495-201ENST00000384435 112 ntBASIC0.12□□□□□ -2.39
HDAC4P56524 SNORD90-201ENST00000391145 111 ntBASIC0.12□□□□□ -2.39
HDAC4P56524 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
HDAC4P56524 RNU6-758P-201ENST00000516292 89 ntBASIC0.12□□□□□ -2.39
HDAC4P56524 IGLVI-20-201ENST00000519296 130 ntBASIC0.12□□□□□ -2.39
HDAC4P56524 MIR4473-201ENST00000583731 91 ntBASIC0.12□□□□□ -2.39
HDAC4P56524 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.12□□□□□ -2.39
HDAC4P56524 SNORD114-15-201ENST00000364687 72 ntBASIC0.11□□□□□ -2.39
HDAC4P56524 RNU6-30P-201ENST00000384561 107 ntBASIC0.11□□□□□ -2.39
HDAC4P56524 Y_RNA.609-201ENST00000410669 89 ntBASIC0.11□□□□□ -2.39
HDAC4P56524 RNU6-32P-201ENST00000383948 107 ntBASIC0.1□□□□□ -2.39
HDAC4P56524 RNU6-811P-201ENST00000384069 107 ntBASIC0.1□□□□□ -2.39
HDAC4P56524 RNU6-13P-201ENST00000384248 107 ntBASIC0.1□□□□□ -2.39
HDAC4P56524 RNU6-12P-201ENST00000384604 107 ntBASIC0.1□□□□□ -2.39
HDAC4P56524 RNU6-41P-201ENST00000384741 107 ntBASIC0.1□□□□□ -2.39
HDAC4P56524 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.39
HDAC4P56524 RNU6-652P-201ENST00000365488 107 ntBASIC0.09□□□□□ -2.4
HDAC4P56524 MIR488-201ENST00000365739 83 ntBASIC0.09□□□□□ -2.4
HDAC4P56524 MIR610-201ENST00000385139 96 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms