Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6V-201ENST00000384105 107 ntBASIC-0.21□□□□□ -2.44
NEK3P51956 U3.27-201ENST00000391237 200 ntBASIC-0.21□□□□□ -2.44
NEK3P51956 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.21□□□□□ -2.44
NEK3P51956 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.21□□□□□ -2.44
NEK3P51956 MIR4536-1-201ENST00000583537 88 ntBASIC-0.21□□□□□ -2.44
NEK3P51956 MIR4473-201ENST00000583731 91 ntBASIC-0.21□□□□□ -2.44
NEK3P51956 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.22□□□□□ -2.44
NEK3P51956 MIR6514-201ENST00000622549 70 ntBASIC-0.22□□□□□ -2.44
NEK3P51956 RNA5SP205-201ENST00000364653 136 ntBASIC-0.23□□□□□ -2.45
NEK3P51956 SNORD114-29-201ENST00000364819 70 ntBASIC-0.23□□□□□ -2.45
NEK3P51956 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.23□□□□□ -2.45
NEK3P51956 RNU6-75P-201ENST00000515944 104 ntBASIC-0.23□□□□□ -2.45
NEK3P51956 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.23□□□□□ -2.45
NEK3P51956 AL365222.1-201ENST00000614661 98 ntBASIC-0.23□□□□□ -2.45
NEK3P51956 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.24□□□□□ -2.45
NEK3P51956 RNU6-22P-201ENST00000384355 107 ntBASIC-0.24□□□□□ -2.45
NEK3P51956 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.24□□□□□ -2.45
NEK3P51956 MIR1302-5-201ENST00000408164 150 ntBASIC-0.24□□□□□ -2.45
NEK3P51956 SCARNA23-201ENST00000516060 130 ntBASIC-0.24□□□□□ -2.45
NEK3P51956 RNU6-904P-201ENST00000516206 101 ntBASIC-0.24□□□□□ -2.45
NEK3P51956 AC132825.6-201ENST00000638861 357 ntBASIC-0.24□□□□□ -2.45
NEK3P51956 RNU6-479P-201ENST00000516348 105 ntBASIC-0.25□□□□□ -2.45
NEK3P51956 AC103810.7-201ENST00000607821 91 ntBASIC-0.25□□□□□ -2.45
NEK3P51956 MIR548O2-201ENST00000616090 70 ntBASIC-0.25□□□□□ -2.45
NEK3P51956 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.26□□□□□ -2.45
NEK3P51956 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.26□□□□□ -2.45
NEK3P51956 IGLVI-20-201ENST00000519296 130 ntBASIC-0.26□□□□□ -2.45
NEK3P51956 SNORA18.1-201ENST00000363418 128 ntBASIC-0.27□□□□□ -2.45
NEK3P51956 RNU6-972P-201ENST00000391208 107 ntBASIC-0.27□□□□□ -2.45
NEK3P51956 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.27□□□□□ -2.45
NEK3P51956 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.27□□□□□ -2.45
NEK3P51956 MIR3910-1-201ENST00000580936 111 ntBASIC-0.27□□□□□ -2.45
NEK3P51956 MIR4777-201ENST00000583710 86 ntBASIC-0.27□□□□□ -2.45
NEK3P51956 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.28□□□□□ -2.45
NEK3P51956 MIR106A-201ENST00000384870 81 ntBASIC-0.28□□□□□ -2.45
NEK3P51956 MIR548U-201ENST00000390728 81 ntBASIC-0.28□□□□□ -2.45
NEK3P51956 MIR451A-201ENST00000385059 72 ntBASIC-0.29□□□□□ -2.46
NEK3P51956 RNA5SP395-201ENST00000516567 118 ntBASIC-0.29□□□□□ -2.46
NEK3P51956 RNU7-188P-201ENST00000517063 64 ntBASIC-0.29□□□□□ -2.46
NEK3P51956 RNU6-154P-201ENST00000384306 106 ntBASIC-0.3□□□□□ -2.46
NEK3P51956 AL603908.1-201ENST00000406098 201 ntBASIC-0.3□□□□□ -2.46
NEK3P51956 RNU7-85P-201ENST00000458851 63 ntBASIC-0.3□□□□□ -2.46
NEK3P51956 SNORD4A-201ENST00000459174 72 ntBASIC-0.3□□□□□ -2.46
NEK3P51956 RNU6-313P-201ENST00000516317 112 ntBASIC-0.3□□□□□ -2.46
NEK3P51956 MIR20A-201ENST00000362279 71 ntBASIC-0.31□□□□□ -2.46
NEK3P51956 MIR214-201ENST00000385214 110 ntBASIC-0.31□□□□□ -2.46
NEK3P51956 AC012531.4-201ENST00000616509 177 ntBASIC-0.31□□□□□ -2.46
NEK3P51956 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.32□□□□□ -2.46
NEK3P51956 RNU6-795P-201ENST00000516323 103 ntBASIC-0.32□□□□□ -2.46
NEK3P51956 MIR548AE1-201ENST00000583292 70 ntBASIC-0.32□□□□□ -2.46
NEK3P51956 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.32□□□□□ -2.46
NEK3P51956 SNORD114-31-201ENST00000363219 75 ntBASIC-0.33□□□□□ -2.46
NEK3P51956 SNORD113-1-201ENST00000365321 69 ntBASIC-0.33□□□□□ -2.46
NEK3P51956 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.33□□□□□ -2.46
NEK3P51956 RNU6-887P-201ENST00000410660 100 ntBASIC-0.33□□□□□ -2.46
NEK3P51956 RN7SL660P-201ENST00000614852 299 ntBASIC-0.33□□□□□ -2.46
NEK3P51956 SNORD114-4-201ENST00000363962 75 ntBASIC-0.34□□□□□ -2.46
NEK3P51956 SNORD114-12-201ENST00000365400 75 ntBASIC-0.34□□□□□ -2.46
NEK3P51956 RNU6-519P-201ENST00000410590 108 ntBASIC-0.34□□□□□ -2.46
NEK3P51956 AC244090.1-201ENST00000441884 93 ntBASIC-0.34□□□□□ -2.46
NEK3P51956 SNORD4B-201ENST00000459083 72 ntBASIC-0.34□□□□□ -2.46
NEK3P51956 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.34□□□□□ -2.46
NEK3P51956 RNA5SP98-201ENST00000363158 137 ntBASIC-0.35□□□□□ -2.47
NEK3P51956 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.35□□□□□ -2.47
NEK3P51956 RNU6-589P-201ENST00000516485 107 ntBASIC-0.35□□□□□ -2.47
NEK3P51956 RNU6-35P-201ENST00000384530 107 ntBASIC-0.36□□□□□ -2.47
NEK3P51956 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
NEK3P51956 MIR5589-201ENST00000579442 60 ntBASIC-0.36□□□□□ -2.47
NEK3P51956 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.37□□□□□ -2.47
NEK3P51956 SNORD58A-201ENST00000383875 65 ntBASIC-0.37□□□□□ -2.47
NEK3P51956 SNORD2-201ENST00000459163 69 ntBASIC-0.37□□□□□ -2.47
NEK3P51956 MIR6129-201ENST00000616087 109 ntBASIC-0.37□□□□□ -2.47
NEK3P51956 SNORD116-10-201ENST00000363791 102 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 RNU6-106P-201ENST00000384405 107 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 SNORA19.1-201ENST00000410656 129 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 RNU2-51P-201ENST00000410708 197 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 RNU6-537P-201ENST00000517277 103 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 MIR3064-201ENST00000581130 66 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 MIR4645-201ENST00000583158 77 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 MIR548Z-201ENST00000584743 97 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 AC104996.3-201ENST00000590718 94 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 MIR3666-201ENST00000607845 111 ntBASIC-0.38□□□□□ -2.47
NEK3P51956 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.39□□□□□ -2.47
NEK3P51956 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.39□□□□□ -2.47
NEK3P51956 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.39□□□□□ -2.47
NEK3P51956 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.39□□□□□ -2.47
NEK3P51956 SNORA63.2-201ENST00000362603 126 ntBASIC-0.4□□□□□ -2.47
NEK3P51956 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.4□□□□□ -2.47
NEK3P51956 SNORD49B-201ENST00000365172 72 ntBASIC-0.4□□□□□ -2.47
NEK3P51956 RNU6-811P-201ENST00000384069 107 ntBASIC-0.4□□□□□ -2.47
NEK3P51956 MIR652-201ENST00000385278 98 ntBASIC-0.4□□□□□ -2.47
NEK3P51956 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.4□□□□□ -2.47
NEK3P51956 MIR4636-201ENST00000582271 80 ntBASIC-0.4□□□□□ -2.47
NEK3P51956 RNY4P3-201ENST00000365254 95 ntBASIC-0.41□□□□□ -2.48
NEK3P51956 RNU6-132P-201ENST00000383863 107 ntBASIC-0.41□□□□□ -2.48
NEK3P51956 MIR590-201ENST00000385008 97 ntBASIC-0.41□□□□□ -2.48
NEK3P51956 RNA5SP300-201ENST00000391197 107 ntBASIC-0.41□□□□□ -2.48
NEK3P51956 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
NEK3P51956 RNU6-554P-201ENST00000410466 106 ntBASIC-0.41□□□□□ -2.48
NEK3P51956 AC096531.1-201ENST00000419107 107 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms