Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MIR548A3-201ENST00000385297 97 ntBASIC-0.48□□□□□ -2.49
GPC3P51654 RNU6-758P-201ENST00000516292 89 ntBASIC-0.48□□□□□ -2.49
GPC3P51654 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.48□□□□□ -2.49
GPC3P51654 RNU6-971P-201ENST00000516920 106 ntBASIC-0.48□□□□□ -2.49
GPC3P51654 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.48□□□□□ -2.49
GPC3P51654 AL035470.1-201ENST00000622571 220 ntBASIC-0.48□□□□□ -2.49
GPC3P51654 RNU4-36P-201ENST00000364294 144 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 SNORD50.2-201ENST00000365465 70 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 SNORA32.3-201ENST00000384772 121 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 MIR604-201ENST00000384880 94 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 MIR451A-201ENST00000385059 72 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 MIR652-201ENST00000385278 98 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.49□□□□□ -2.49
GPC3P51654 RNU7-107P-201ENST00000459121 61 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 RNU6-412P-201ENST00000516434 106 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 RNU6-255P-201ENST00000516957 105 ntBASIC-0.49□□□□□ -2.49
GPC3P51654 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.5□□□□□ -2.49
GPC3P51654 MIR548U-201ENST00000390728 81 ntBASIC-0.5□□□□□ -2.49
GPC3P51654 RNU6-644P-201ENST00000391155 98 ntBASIC-0.5□□□□□ -2.49
GPC3P51654 AC025521.1-201ENST00000621624 286 ntBASIC-0.5□□□□□ -2.49
GPC3P51654 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 RNA5SP368-201ENST00000364298 116 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 RNU6-455P-201ENST00000384681 107 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 RNU6-813P-201ENST00000384691 107 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 RNU6-907P-201ENST00000390924 102 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 RNA5SP451-201ENST00000410588 110 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 RNU6-75P-201ENST00000515944 104 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 RNU6-346P-201ENST00000516288 111 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 RNA5SP66-201ENST00000517178 101 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.51□□□□□ -2.49
GPC3P51654 RNU6-900P-201ENST00000384498 102 ntBASIC-0.52□□□□□ -2.49
GPC3P51654 MIR548A1-201ENST00000385041 97 ntBASIC-0.52□□□□□ -2.49
GPC3P51654 RNA5SP25-201ENST00000410815 110 ntBASIC-0.52□□□□□ -2.49
GPC3P51654 RNU6-659P-201ENST00000516454 104 ntBASIC-0.52□□□□□ -2.49
GPC3P51654 AL513043.2-201ENST00000573941 143 ntBASIC-0.52□□□□□ -2.49
GPC3P51654 AL590491.3-201ENST00000610731 82 ntBASIC-0.52□□□□□ -2.49
GPC3P51654 MIR3671-201ENST00000580455 88 ntBASIC-0.53□□□□□ -2.49
GPC3P51654 AC108676.2-201ENST00000605225 163 ntBASIC-0.53□□□□□ -2.49
GPC3P51654 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.54□□□□□ -2.5
GPC3P51654 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.54□□□□□ -2.5
GPC3P51654 HAR1A.1-201ENST00000459583 118 ntBASIC-0.54□□□□□ -2.5
GPC3P51654 SNORA40.17-201ENST00000517256 115 ntBASIC-0.54□□□□□ -2.5
GPC3P51654 MIR3668-201ENST00000582138 75 ntBASIC-0.54□□□□□ -2.5
GPC3P51654 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.55□□□□□ -2.5
GPC3P51654 RNU6-880P-201ENST00000384526 107 ntBASIC-0.55□□□□□ -2.5
GPC3P51654 SNORD33.1-201ENST00000516213 88 ntBASIC-0.55□□□□□ -2.5
GPC3P51654 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.55□□□□□ -2.5
GPC3P51654 AC093726.3-201ENST00000637588 150 ntBASIC-0.55□□□□□ -2.5
GPC3P51654 SNORD115-25-201ENST00000362619 82 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 SNORD95.1-201ENST00000364099 68 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 RNY4P3-201ENST00000365254 95 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 SNORD116-14-201ENST00000383894 92 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 SNORD116-17-201ENST00000383929 92 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 RNU6-209P-201ENST00000384118 107 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 SNORD116-15-201ENST00000384445 92 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 SNORD116-19-201ENST00000384729 92 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 AP000676.1-201ENST00000533307 52 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 uc_338.36-201ENST00000622331 158 ntBASIC-0.56□□□□□ -2.5
GPC3P51654 RNU6-901P-201ENST00000384593 106 ntBASIC-0.57□□□□□ -2.5
GPC3P51654 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
GPC3P51654 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.58□□□□□ -2.5
GPC3P51654 SNORA63.2-201ENST00000362603 126 ntBASIC-0.58□□□□□ -2.5
GPC3P51654 RNU6-54P-201ENST00000365563 107 ntBASIC-0.58□□□□□ -2.5
GPC3P51654 MIR9-2-201ENST00000384838 87 ntBASIC-0.58□□□□□ -2.5
GPC3P51654 RNU7-85P-201ENST00000458851 63 ntBASIC-0.58□□□□□ -2.5
GPC3P51654 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.58□□□□□ -2.5
GPC3P51654 AC103810.7-201ENST00000607821 91 ntBASIC-0.58□□□□□ -2.5
GPC3P51654 MIR548AZ-201ENST00000616567 95 ntBASIC-0.58□□□□□ -2.5
GPC3P51654 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 MIR196A2-201ENST00000385189 110 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 RNU6-972P-201ENST00000391208 107 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 RNU6-519P-201ENST00000410590 108 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 RNU6-284P-201ENST00000411105 106 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 FGF7P7-201ENST00000514120 227 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 MIR3613-201ENST00000579844 87 ntBASIC-0.59□□□□□ -2.5
GPC3P51654 RNU6-704P-201ENST00000364162 103 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 SNORD116-21-201ENST00000384507 92 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
GPC3P51654 MIR548I1-201ENST00000408810 149 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 SNORA13-201ENST00000458790 133 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 SNORD4B-201ENST00000459083 72 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 RNU6-62P-201ENST00000516526 102 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 MIR548Z-201ENST00000584743 97 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 AC104996.3-201ENST00000590718 94 ntBASIC-0.6□□□□□ -2.51
GPC3P51654 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.61□□□□□ -2.51
GPC3P51654 RNU6-746P-201ENST00000384112 109 ntBASIC-0.61□□□□□ -2.51
GPC3P51654 MIR224-201ENST00000384889 81 ntBASIC-0.61□□□□□ -2.51
GPC3P51654 RPS29P8-201ENST00000445109 171 ntBASIC-0.61□□□□□ -2.51
GPC3P51654 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.61□□□□□ -2.51
GPC3P51654 MIR4432-201ENST00000581823 84 ntBASIC-0.61□□□□□ -2.51
GPC3P51654 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms