Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 SNORA7.1-201ENST00000363750 139 ntBASIC1.28□□□□□ -2.2
KCNC1P48547 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
KCNC1P48547 MIR644A-201ENST00000385262 94 ntBASIC1.28□□□□□ -2.2
KCNC1P48547 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.28□□□□□ -2.2
KCNC1P48547 AC002429.1-201ENST00000437672 148 ntBASIC1.28□□□□□ -2.2
KCNC1P48547 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
KCNC1P48547 AL136317.1-201ENST00000612653 226 ntBASIC1.28□□□□□ -2.2
KCNC1P48547 AL109933.3-201ENST00000619095 188 ntBASIC1.28□□□□□ -2.2
KCNC1P48547 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
KCNC1P48547 RNU6-1216P-201ENST00000362590 107 ntBASIC1.27□□□□□ -2.21
KCNC1P48547 RNU6-495P-201ENST00000362995 107 ntBASIC1.27□□□□□ -2.21
KCNC1P48547 Y_RNA.174-201ENST00000363781 105 ntBASIC1.27□□□□□ -2.21
KCNC1P48547 MIR519E-201ENST00000385075 84 ntBASIC1.27□□□□□ -2.21
KCNC1P48547 RNU7-104P-201ENST00000459398 79 ntBASIC1.27□□□□□ -2.21
KCNC1P48547 RNU6-982P-201ENST00000516216 102 ntBASIC1.27□□□□□ -2.21
KCNC1P48547 MIR4421-201ENST00000578133 69 ntBASIC1.27□□□□□ -2.21
KCNC1P48547 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KCNC1P48547 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KCNC1P48547 SNORD75.2-201ENST00000408784 58 ntBASIC1.26□□□□□ -2.21
KCNC1P48547 AL691482.2-201ENST00000457453 84 ntBASIC1.26□□□□□ -2.21
KCNC1P48547 SNORA25.4-201ENST00000363666 124 ntBASIC1.25□□□□□ -2.21
KCNC1P48547 RNU6-54P-201ENST00000365563 107 ntBASIC1.25□□□□□ -2.21
KCNC1P48547 MIR203A-201ENST00000384836 110 ntBASIC1.25□□□□□ -2.21
KCNC1P48547 MIR617-201ENST00000385030 97 ntBASIC1.25□□□□□ -2.21
KCNC1P48547 MIR1276-201ENST00000408707 83 ntBASIC1.25□□□□□ -2.21
KCNC1P48547 RNU7-24P-201ENST00000458867 62 ntBASIC1.25□□□□□ -2.21
KCNC1P48547 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
KCNC1P48547 RNU6-752P-201ENST00000516376 102 ntBASIC1.25□□□□□ -2.21
KCNC1P48547 MIR548O2-201ENST00000616090 70 ntBASIC1.25□□□□□ -2.21
KCNC1P48547 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KCNC1P48547 Y_RNA.224-201ENST00000364308 111 ntBASIC1.24□□□□□ -2.21
KCNC1P48547 RNU6-1039P-201ENST00000383931 107 ntBASIC1.24□□□□□ -2.21
KCNC1P48547 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
KCNC1P48547 SNORD42B-201ENST00000458893 67 ntBASIC1.24□□□□□ -2.21
KCNC1P48547 AC002350.1-201ENST00000490759 375 ntBASIC1.24□□□□□ -2.21
KCNC1P48547 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
KCNC1P48547 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
KCNC1P48547 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
KCNC1P48547 AC093423.1-201ENST00000440817 142 ntBASIC1.23□□□□□ -2.21
KCNC1P48547 AC067940.1-201ENST00000458411 300 ntBASIC1.23□□□□□ -2.21
KCNC1P48547 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
KCNC1P48547 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
KCNC1P48547 MIR6509-201ENST00000614603 85 ntBASIC1.22□□□□□ -2.21
KCNC1P48547 AC067863.3-201ENST00000624172 122 ntBASIC1.22□□□□□ -2.21
KCNC1P48547 MIR19B1-201ENST00000384829 87 ntBASIC1.21□□□□□ -2.22
KCNC1P48547 SNORD89-201ENST00000390981 114 ntBASIC1.21□□□□□ -2.22
KCNC1P48547 SNORA40.17-201ENST00000517256 115 ntBASIC1.21□□□□□ -2.22
KCNC1P48547 MIR4511-201ENST00000582784 87 ntBASIC1.21□□□□□ -2.22
KCNC1P48547 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
KCNC1P48547 AC244669.1-204ENST00000621564 178 ntBASIC1.21□□□□□ -2.22
KCNC1P48547 RNU6-1187P-201ENST00000364771 110 ntBASIC1.2□□□□□ -2.22
KCNC1P48547 RNU6V-201ENST00000384105 107 ntBASIC1.2□□□□□ -2.22
KCNC1P48547 RNU6-42P-201ENST00000384165 107 ntBASIC1.2□□□□□ -2.22
KCNC1P48547 SNORD28-201ENST00000384706 75 ntBASIC1.2□□□□□ -2.22
KCNC1P48547 RNA5SP117-201ENST00000365294 118 ntBASIC1.19□□□□□ -2.22
KCNC1P48547 SNORD41.1-201ENST00000391000 69 ntBASIC1.19□□□□□ -2.22
KCNC1P48547 RNA5SP220-201ENST00000516298 104 ntBASIC1.19□□□□□ -2.22
KCNC1P48547 MIR4452-201ENST00000583004 71 ntBASIC1.18□□□□□ -2.22
KCNC1P48547 MIR3657-201ENST00000584818 117 ntBASIC1.18□□□□□ -2.22
KCNC1P48547 SNORD18A-201ENST00000363753 72 ntBASIC1.17□□□□□ -2.22
KCNC1P48547 RNU6-1335P-201ENST00000365426 107 ntBASIC1.17□□□□□ -2.22
KCNC1P48547 SNORD105-201ENST00000386910 85 ntBASIC1.17□□□□□ -2.22
KCNC1P48547 MIR216B-201ENST00000390186 82 ntBASIC1.17□□□□□ -2.22
KCNC1P48547 AC110620.1-201ENST00000416042 228 ntBASIC1.17□□□□□ -2.22
KCNC1P48547 RNU6-1110P-201ENST00000516462 101 ntBASIC1.17□□□□□ -2.22
KCNC1P48547 MIR4639-201ENST00000584938 69 ntBASIC1.17□□□□□ -2.22
KCNC1P48547 AC103706.3-201ENST00000636297 85 ntBASIC1.17□□□□□ -2.22
KCNC1P48547 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
KCNC1P48547 RNU6-990P-201ENST00000364385 104 ntBASIC1.16□□□□□ -2.22
KCNC1P48547 RNU6-726P-201ENST00000364680 107 ntBASIC1.16□□□□□ -2.22
KCNC1P48547 MIR489-201ENST00000384923 84 ntBASIC1.16□□□□□ -2.22
KCNC1P48547 AC073869.9-201ENST00000641610 120 ntBASIC1.16□□□□□ -2.22
KCNC1P48547 RNU6-499P-201ENST00000365615 107 ntBASIC1.15□□□□□ -2.23
KCNC1P48547 RNU6-260P-201ENST00000384092 107 ntBASIC1.15□□□□□ -2.23
KCNC1P48547 MIR200A-201ENST00000384875 90 ntBASIC1.15□□□□□ -2.23
KCNC1P48547 MT-TY-201ENST00000387409 66 ntBASIC1.15□□□□□ -2.23
KCNC1P48547 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
KCNC1P48547 RNA5SP102-201ENST00000516865 106 ntBASIC1.15□□□□□ -2.23
KCNC1P48547 RNA5SP47-201ENST00000517230 109 ntBASIC1.15□□□□□ -2.23
KCNC1P48547 MIR3678-201ENST00000578455 94 ntBASIC1.15□□□□□ -2.23
KCNC1P48547 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
KCNC1P48547 RNU6-716P-201ENST00000365621 103 ntBASIC1.14□□□□□ -2.23
KCNC1P48547 MTND4LP19-201ENST00000403051 166 ntBASIC1.14□□□□□ -2.23
KCNC1P48547 RNU6-645P-201ENST00000364649 106 ntBASIC1.13□□□□□ -2.23
KCNC1P48547 RNU6-269P-201ENST00000391077 97 ntBASIC1.13□□□□□ -2.23
KCNC1P48547 U7.7-201ENST00000459276 60 ntBASIC1.13□□□□□ -2.23
KCNC1P48547 RNA5SP147-201ENST00000516493 109 ntBASIC1.13□□□□□ -2.23
KCNC1P48547 RNU6-668P-201ENST00000364180 107 ntBASIC1.12□□□□□ -2.23
KCNC1P48547 RNU1-141P-201ENST00000364623 158 ntBASIC1.12□□□□□ -2.23
KCNC1P48547 SNORD114-24-201ENST00000365029 72 ntBASIC1.12□□□□□ -2.23
KCNC1P48547 RNU6-135P-201ENST00000516769 101 ntBASIC1.12□□□□□ -2.23
KCNC1P48547 AC018659.1-201ENST00000551083 169 ntBASIC1.12□□□□□ -2.23
KCNC1P48547 MIR3612-201ENST00000579753 87 ntBASIC1.12□□□□□ -2.23
KCNC1P48547 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
KCNC1P48547 Y_RNA.375-201ENST00000365625 101 ntBASIC1.11□□□□□ -2.23
KCNC1P48547 MIR633-201ENST00000384821 98 ntBASIC1.11□□□□□ -2.23
KCNC1P48547 RNU7-74P-201ENST00000459104 62 ntBASIC1.11□□□□□ -2.23
KCNC1P48547 RNU6-469P-201ENST00000516253 101 ntBASIC1.11□□□□□ -2.23
KCNC1P48547 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.11□□□□□ -2.23
KCNC1P48547 RNU5B-6P-201ENST00000516765 68 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms