Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RNU6-495P-201ENST00000362995 107 ntBASIC1.71□□□□□ -2.14
CLCN1P35523 RNU6-716P-201ENST00000365621 103 ntBASIC1.71□□□□□ -2.14
CLCN1P35523 MIR489-201ENST00000384923 84 ntBASIC1.71□□□□□ -2.14
CLCN1P35523 RNU7-24P-201ENST00000458867 62 ntBASIC1.71□□□□□ -2.14
CLCN1P35523 RNU6-881P-201ENST00000516813 102 ntBASIC1.71□□□□□ -2.14
CLCN1P35523 RNA5SP47-201ENST00000517230 109 ntBASIC1.71□□□□□ -2.14
CLCN1P35523 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
CLCN1P35523 Y_RNA.224-201ENST00000364308 111 ntBASIC1.7□□□□□ -2.14
CLCN1P35523 SNORD114-24-201ENST00000365029 72 ntBASIC1.7□□□□□ -2.14
CLCN1P35523 RNU6-54P-201ENST00000365563 107 ntBASIC1.7□□□□□ -2.14
CLCN1P35523 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.7□□□□□ -2.14
CLCN1P35523 MIR26B-201ENST00000362251 77 ntBASIC1.69□□□□□ -2.14
CLCN1P35523 SNORD115-22-201ENST00000364456 82 ntBASIC1.69□□□□□ -2.14
CLCN1P35523 RNU6-800P-201ENST00000384473 103 ntBASIC1.69□□□□□ -2.14
CLCN1P35523 RNU6-955P-201ENST00000410497 104 ntBASIC1.69□□□□□ -2.14
CLCN1P35523 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CLCN1P35523 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CLCN1P35523 RNU6-726P-201ENST00000364680 107 ntBASIC1.68□□□□□ -2.14
CLCN1P35523 RNU6V-201ENST00000384105 107 ntBASIC1.68□□□□□ -2.14
CLCN1P35523 RNU4-62P-201ENST00000410125 130 ntBASIC1.68□□□□□ -2.14
CLCN1P35523 AP1B1P2-201ENST00000416196 106 ntBASIC1.68□□□□□ -2.14
CLCN1P35523 RNU6-1039P-201ENST00000383931 107 ntBASIC1.67□□□□□ -2.14
CLCN1P35523 RNA5SP404-201ENST00000517118 132 ntBASIC1.67□□□□□ -2.14
CLCN1P35523 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
CLCN1P35523 MIR6509-201ENST00000614603 85 ntBASIC1.67□□□□□ -2.14
CLCN1P35523 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
CLCN1P35523 MIR4460-201ENST00000577862 86 ntBASIC1.66□□□□□ -2.14
CLCN1P35523 RNA5SP255-201ENST00000516370 107 ntBASIC1.65□□□□□ -2.15
CLCN1P35523 SCARNA16.5-201ENST00000517114 183 ntBASIC1.65□□□□□ -2.15
CLCN1P35523 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
CLCN1P35523 SNORD113.1-201ENST00000363280 73 ntBASIC1.64□□□□□ -2.15
CLCN1P35523 RNU1-124P-201ENST00000363861 145 ntBASIC1.64□□□□□ -2.15
CLCN1P35523 Y_RNA.386-201ENST00000383913 105 ntBASIC1.64□□□□□ -2.15
CLCN1P35523 MIR203A-201ENST00000384836 110 ntBASIC1.64□□□□□ -2.15
CLCN1P35523 SNORA67.5-201ENST00000391036 107 ntBASIC1.64□□□□□ -2.15
CLCN1P35523 AC011195.1-201ENST00000578177 177 ntBASIC1.64□□□□□ -2.15
CLCN1P35523 MIR1323-201ENST00000408090 73 ntBASIC1.63□□□□□ -2.15
CLCN1P35523 MIR1304-201ENST00000408243 91 ntBASIC1.63□□□□□ -2.15
CLCN1P35523 AC093423.1-201ENST00000440817 142 ntBASIC1.63□□□□□ -2.15
CLCN1P35523 AC068338.1-201ENST00000565567 176 ntBASIC1.63□□□□□ -2.15
CLCN1P35523 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLCN1P35523 RNU6-1216P-201ENST00000362590 107 ntBASIC1.62□□□□□ -2.15
CLCN1P35523 MIR618-201ENST00000385287 98 ntBASIC1.62□□□□□ -2.15
CLCN1P35523 MT-TY-201ENST00000387409 66 ntBASIC1.62□□□□□ -2.15
CLCN1P35523 RNU6-630P-201ENST00000391258 106 ntBASIC1.62□□□□□ -2.15
CLCN1P35523 SNORD99-201ENST00000408612 74 ntBASIC1.62□□□□□ -2.15
CLCN1P35523 RNU1-141P-201ENST00000364623 158 ntBASIC1.61□□□□□ -2.15
CLCN1P35523 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLCN1P35523 MIR758-201ENST00000390227 88 ntBASIC1.6□□□□□ -2.15
CLCN1P35523 RNU6-269P-201ENST00000391077 97 ntBASIC1.6□□□□□ -2.15
CLCN1P35523 SNORD42B-201ENST00000458893 67 ntBASIC1.6□□□□□ -2.15
CLCN1P35523 MIR4303-201ENST00000581299 66 ntBASIC1.6□□□□□ -2.15
CLCN1P35523 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CLCN1P35523 MIR18A-201ENST00000362310 71 ntBASIC1.59□□□□□ -2.15
CLCN1P35523 MIR7-2-201ENST00000384970 110 ntBASIC1.59□□□□□ -2.15
CLCN1P35523 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
CLCN1P35523 MIR1265-201ENST00000408444 86 ntBASIC1.59□□□□□ -2.15
CLCN1P35523 RNA5SP227-201ENST00000516184 113 ntBASIC1.59□□□□□ -2.15
CLCN1P35523 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.59□□□□□ -2.15
CLCN1P35523 AC005520.4-201ENST00000604337 90 ntBASIC1.59□□□□□ -2.15
CLCN1P35523 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
CLCN1P35523 Y_RNA.443-201ENST00000384135 111 ntBASIC1.58□□□□□ -2.16
CLCN1P35523 SNORA8.2-201ENST00000384372 139 ntBASIC1.58□□□□□ -2.16
CLCN1P35523 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
CLCN1P35523 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.57□□□□□ -2.16
CLCN1P35523 SNORA25.4-201ENST00000363666 124 ntBASIC1.56□□□□□ -2.16
CLCN1P35523 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
CLCN1P35523 MIR3657-201ENST00000584818 117 ntBASIC1.56□□□□□ -2.16
CLCN1P35523 RNU4-45P-201ENST00000365469 141 ntBASIC1.55□□□□□ -2.16
CLCN1P35523 RNU6-260P-201ENST00000384092 107 ntBASIC1.55□□□□□ -2.16
CLCN1P35523 RNU6-42P-201ENST00000384165 107 ntBASIC1.55□□□□□ -2.16
CLCN1P35523 AL354695.1-201ENST00000427935 228 ntBASIC1.55□□□□□ -2.16
CLCN1P35523 RNA5SP484-201ENST00000458857 111 ntBASIC1.55□□□□□ -2.16
CLCN1P35523 RNU6-982P-201ENST00000516216 102 ntBASIC1.55□□□□□ -2.16
CLCN1P35523 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.55□□□□□ -2.16
CLCN1P35523 MIR6504-201ENST00000613520 61 ntBASIC1.55□□□□□ -2.16
CLCN1P35523 Y_RNA.205-201ENST00000364128 113 ntBASIC1.54□□□□□ -2.16
CLCN1P35523 SNORD116-24-201ENST00000384549 92 ntBASIC1.54□□□□□ -2.16
CLCN1P35523 RNU5B-6P-201ENST00000516765 68 ntBASIC1.54□□□□□ -2.16
CLCN1P35523 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
CLCN1P35523 MIR6734-201ENST00000621166 68 ntBASIC1.54□□□□□ -2.16
CLCN1P35523 MIR6828-201ENST00000636181 60 ntBASIC1.54□□□□□ -2.16
CLCN1P35523 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLCN1P35523 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
CLCN1P35523 MIR1276-201ENST00000408707 83 ntBASIC1.53□□□□□ -2.16
CLCN1P35523 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
CLCN1P35523 RNU6-471P-201ENST00000383944 106 ntBASIC1.52□□□□□ -2.17
CLCN1P35523 RNA5SP222-201ENST00000411039 105 ntBASIC1.52□□□□□ -2.17
CLCN1P35523 MTND4LP1-201ENST00000446263 157 ntBASIC1.52□□□□□ -2.17
CLCN1P35523 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.52□□□□□ -2.17
CLCN1P35523 RNA5SP220-201ENST00000516298 104 ntBASIC1.52□□□□□ -2.17
CLCN1P35523 RNA5SP268-201ENST00000516828 124 ntBASIC1.52□□□□□ -2.17
CLCN1P35523 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.52□□□□□ -2.17
CLCN1P35523 AL162376.1-201ENST00000624117 175 ntBASIC1.52□□□□□ -2.17
CLCN1P35523 AC073869.9-201ENST00000641610 120 ntBASIC1.52□□□□□ -2.17
CLCN1P35523 AC069503.3-201ENST00000618674 145 ntBASIC1.51□□□□□ -2.17
CLCN1P35523 SNORD114-4-201ENST00000363962 75 ntBASIC1.5□□□□□ -2.17
CLCN1P35523 RNU6-392P-201ENST00000364926 101 ntBASIC1.5□□□□□ -2.17
CLCN1P35523 MIR4452-201ENST00000583004 71 ntBASIC1.5□□□□□ -2.17
CLCN1P35523 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms