Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 RNU4-32P-201ENST00000363404 141 ntBASIC0.27□□□□□ -2.37
CHATP28329 RNU6-153P-201ENST00000364422 104 ntBASIC0.27□□□□□ -2.37
CHATP28329 Y_RNA.290-201ENST00000364879 114 ntBASIC0.27□□□□□ -2.37
CHATP28329 MIR617-201ENST00000385030 97 ntBASIC0.27□□□□□ -2.37
CHATP28329 MIR519E-201ENST00000385075 84 ntBASIC0.27□□□□□ -2.37
CHATP28329 RNA5SP63-201ENST00000391225 112 ntBASIC0.27□□□□□ -2.37
CHATP28329 Y_RNA.609-201ENST00000410669 89 ntBASIC0.27□□□□□ -2.37
CHATP28329 Y_RNA.348-201ENST00000365403 103 ntBASIC0.26□□□□□ -2.37
CHATP28329 SNORD110-201ENST00000408189 75 ntBASIC0.26□□□□□ -2.37
CHATP28329 SNORD4B-201ENST00000459083 72 ntBASIC0.26□□□□□ -2.37
CHATP28329 RNU6-168P-201ENST00000516189 101 ntBASIC0.26□□□□□ -2.37
CHATP28329 RNU6-1232P-201ENST00000516299 86 ntBASIC0.26□□□□□ -2.37
CHATP28329 AC026421.1-201ENST00000519101 163 ntBASIC0.26□□□□□ -2.37
CHATP28329 RNU1-29P-201ENST00000606574 126 ntBASIC0.26□□□□□ -2.37
CHATP28329 SNORA9.1-201ENST00000362412 131 ntBASIC0.25□□□□□ -2.37
CHATP28329 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CHATP28329 RNA5SP89-201ENST00000410300 108 ntBASIC0.25□□□□□ -2.37
CHATP28329 RNU6-935P-201ENST00000410371 100 ntBASIC0.25□□□□□ -2.37
CHATP28329 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
CHATP28329 RNU6-158P-201ENST00000517104 100 ntBASIC0.25□□□□□ -2.37
CHATP28329 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.25□□□□□ -2.37
CHATP28329 RNU1-141P-201ENST00000364623 158 ntBASIC0.24□□□□□ -2.37
CHATP28329 RNU6-132P-201ENST00000383863 107 ntBASIC0.24□□□□□ -2.37
CHATP28329 RNU6-811P-201ENST00000384069 107 ntBASIC0.24□□□□□ -2.37
CHATP28329 MIR451A-201ENST00000385059 72 ntBASIC0.24□□□□□ -2.37
CHATP28329 MIR548U-201ENST00000390728 81 ntBASIC0.24□□□□□ -2.37
CHATP28329 AC069113.3-201ENST00000521019 150 ntBASIC0.24□□□□□ -2.37
CHATP28329 MIR4460-201ENST00000577862 86 ntBASIC0.24□□□□□ -2.37
CHATP28329 MIR2909-201ENST00000617113 69 ntBASIC0.24□□□□□ -2.37
CHATP28329 MALAT1.1-201ENST00000618249 95 ntBASIC0.24□□□□□ -2.37
CHATP28329 MIR499B-201ENST00000636498 73 ntBASIC0.24□□□□□ -2.37
CHATP28329 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.24□□□□□ -2.37
CHATP28329 RNU6-905P-201ENST00000384434 107 ntBASIC0.23□□□□□ -2.37
CHATP28329 RNU6-1052P-201ENST00000411398 104 ntBASIC0.23□□□□□ -2.37
CHATP28329 FGF7P7-201ENST00000514120 227 ntBASIC0.23□□□□□ -2.37
CHATP28329 RNU6-719P-201ENST00000516671 104 ntBASIC0.23□□□□□ -2.37
CHATP28329 MIR4473-201ENST00000583731 91 ntBASIC0.23□□□□□ -2.37
CHATP28329 MTRNR2L2-201ENST00000604882 87 ntBASIC0.23□□□□□ -2.37
CHATP28329 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.23□□□□□ -2.37
CHATP28329 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.23□□□□□ -2.37
CHATP28329 RNU6-640P-201ENST00000363693 105 ntBASIC0.22□□□□□ -2.37
CHATP28329 RNA5SP128-201ENST00000365305 116 ntBASIC0.22□□□□□ -2.37
CHATP28329 MIR5706-201ENST00000579841 80 ntBASIC0.22□□□□□ -2.37
CHATP28329 AC104996.3-201ENST00000590718 94 ntBASIC0.22□□□□□ -2.37
CHATP28329 Y_RNA.491-201ENST00000384417 107 ntBASIC0.21□□□□□ -2.38
CHATP28329 MIR643-201ENST00000385267 97 ntBASIC0.21□□□□□ -2.38
CHATP28329 RNA5SP292-201ENST00000390974 118 ntBASIC0.21□□□□□ -2.38
CHATP28329 RNA5SP395-201ENST00000516567 118 ntBASIC0.21□□□□□ -2.38
CHATP28329 RNU5B-6P-201ENST00000516765 68 ntBASIC0.21□□□□□ -2.38
CHATP28329 YWHAEP2-201ENST00000580066 112 ntBASIC0.21□□□□□ -2.38
CHATP28329 MIR3064-201ENST00000581130 66 ntBASIC0.21□□□□□ -2.38
CHATP28329 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
CHATP28329 U7.6-201ENST00000610841 64 ntBASIC0.21□□□□□ -2.38
CHATP28329 Y_RNA.220-201ENST00000364244 109 ntBASIC0.2□□□□□ -2.38
CHATP28329 MIR488-201ENST00000365739 83 ntBASIC0.2□□□□□ -2.38
CHATP28329 RNY4P30-201ENST00000410216 95 ntBASIC0.2□□□□□ -2.38
CHATP28329 RNY1P7-201ENST00000384743 110 ntBASIC0.19□□□□□ -2.38
CHATP28329 MIR501-201ENST00000390204 84 ntBASIC0.19□□□□□ -2.38
CHATP28329 RNU6-127P-201ENST00000390897 107 ntBASIC0.19□□□□□ -2.38
CHATP28329 RNU6-1131P-201ENST00000364955 107 ntBASIC0.18□□□□□ -2.38
CHATP28329 AC093423.1-201ENST00000440817 142 ntBASIC0.18□□□□□ -2.38
CHATP28329 RNU6-848P-201ENST00000515948 107 ntBASIC0.18□□□□□ -2.38
CHATP28329 RNU6-617P-201ENST00000516147 107 ntBASIC0.18□□□□□ -2.38
CHATP28329 RNU6-473P-201ENST00000516164 107 ntBASIC0.18□□□□□ -2.38
CHATP28329 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.18□□□□□ -2.38
CHATP28329 RNU6-1049P-201ENST00000516414 107 ntBASIC0.18□□□□□ -2.38
CHATP28329 SNORA18.5-201ENST00000516616 101 ntBASIC0.18□□□□□ -2.38
CHATP28329 RNA5SP285-201ENST00000516619 119 ntBASIC0.18□□□□□ -2.38
CHATP28329 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
CHATP28329 AC069503.3-201ENST00000618674 145 ntBASIC0.18□□□□□ -2.38
CHATP28329 MIR4315-1-201ENST00000636800 73 ntBASIC0.18□□□□□ -2.38
CHATP28329 MIR4315-2-201ENST00000640925 73 ntBASIC0.18□□□□□ -2.38
CHATP28329 RNU6V-201ENST00000384105 107 ntBASIC0.17□□□□□ -2.38
CHATP28329 MT-TY-201ENST00000387409 66 ntBASIC0.17□□□□□ -2.38
CHATP28329 MIR216B-201ENST00000390186 82 ntBASIC0.17□□□□□ -2.38
CHATP28329 RNA5SP299-201ENST00000391203 116 ntBASIC0.17□□□□□ -2.38
CHATP28329 HMGN2P22-201ENST00000427588 175 ntBASIC0.17□□□□□ -2.38
CHATP28329 MIR3140-201ENST00000583685 90 ntBASIC0.17□□□□□ -2.38
CHATP28329 MIR4668-201ENST00000582284 70 ntBASIC0.16□□□□□ -2.38
CHATP28329 MIR4677-201ENST00000584153 80 ntBASIC0.16□□□□□ -2.38
CHATP28329 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
CHATP28329 Y_RNA.125-201ENST00000363371 111 ntBASIC0.15□□□□□ -2.39
CHATP28329 RNU6-1134P-201ENST00000365156 101 ntBASIC0.15□□□□□ -2.39
CHATP28329 RNU6-1051P-201ENST00000365471 102 ntBASIC0.15□□□□□ -2.39
CHATP28329 SNORD116-22-201ENST00000384430 92 ntBASIC0.15□□□□□ -2.39
CHATP28329 RNU6-35P-201ENST00000384530 107 ntBASIC0.15□□□□□ -2.39
CHATP28329 MIR516B1-201ENST00000385211 90 ntBASIC0.15□□□□□ -2.39
CHATP28329 MIR1236-201ENST00000408340 102 ntBASIC0.15□□□□□ -2.39
CHATP28329 MTATP6P29-201ENST00000415057 132 ntBASIC0.15□□□□□ -2.39
CHATP28329 RNU6-762P-201ENST00000517107 102 ntBASIC0.15□□□□□ -2.39
CHATP28329 SNORD115-27-201ENST00000364430 82 ntBASIC0.14□□□□□ -2.39
CHATP28329 SNORD90-201ENST00000391145 111 ntBASIC0.14□□□□□ -2.39
CHATP28329 SNORA25.13-201ENST00000516395 103 ntBASIC0.14□□□□□ -2.39
CHATP28329 MIR4796-201ENST00000580742 81 ntBASIC0.14□□□□□ -2.39
CHATP28329 AC104408.1-201ENST00000605241 170 ntBASIC0.14□□□□□ -2.39
CHATP28329 MIR548O2-201ENST00000616090 70 ntBASIC0.14□□□□□ -2.39
CHATP28329 AC084368.1-201ENST00000620935 65 ntBASIC0.14□□□□□ -2.39
CHATP28329 uc_338.10-201ENST00000621872 182 ntBASIC0.14□□□□□ -2.39
CHATP28329 SNORA63.2-201ENST00000362603 126 ntBASIC0.13□□□□□ -2.39
CHATP28329 RNY4P3-201ENST00000365254 95 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms