Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.24□□□□□ -2.45
ABCD3P28288 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.25□□□□□ -2.45
ABCD3P28288 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.25□□□□□ -2.45
ABCD3P28288 MIR4645-201ENST00000583158 77 ntBASIC-0.25□□□□□ -2.45
ABCD3P28288 AP001180.6-201ENST00000584918 159 ntBASIC-0.25□□□□□ -2.45
ABCD3P28288 SNORD114-29-201ENST00000364819 70 ntBASIC-0.26□□□□□ -2.45
ABCD3P28288 RNU6-81P-201ENST00000365608 104 ntBASIC-0.26□□□□□ -2.45
ABCD3P28288 RNU6-813P-201ENST00000384691 107 ntBASIC-0.26□□□□□ -2.45
ABCD3P28288 RNU6-65P-201ENST00000516332 98 ntBASIC-0.26□□□□□ -2.45
ABCD3P28288 MIR3613-201ENST00000579844 87 ntBASIC-0.26□□□□□ -2.45
ABCD3P28288 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.27□□□□□ -2.45
ABCD3P28288 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.27□□□□□ -2.45
ABCD3P28288 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.27□□□□□ -2.45
ABCD3P28288 RNU6-758P-201ENST00000516292 89 ntBASIC-0.27□□□□□ -2.45
ABCD3P28288 AL513043.2-201ENST00000573941 143 ntBASIC-0.27□□□□□ -2.45
ABCD3P28288 SNORA18.1-201ENST00000363418 128 ntBASIC-0.28□□□□□ -2.45
ABCD3P28288 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.28□□□□□ -2.45
ABCD3P28288 MIR106A-201ENST00000384870 81 ntBASIC-0.28□□□□□ -2.45
ABCD3P28288 RNU6-644P-201ENST00000391155 98 ntBASIC-0.28□□□□□ -2.45
ABCD3P28288 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.28□□□□□ -2.45
ABCD3P28288 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.28□□□□□ -2.45
ABCD3P28288 RNU7-188P-201ENST00000517063 64 ntBASIC-0.28□□□□□ -2.45
ABCD3P28288 MIR4536-1-201ENST00000583537 88 ntBASIC-0.28□□□□□ -2.45
ABCD3P28288 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCD3P28288 RNU6-75P-201ENST00000515944 104 ntBASIC-0.29□□□□□ -2.46
ABCD3P28288 MIR4493-201ENST00000584016 73 ntBASIC-0.29□□□□□ -2.46
ABCD3P28288 RNU6-154P-201ENST00000384306 106 ntBASIC-0.3□□□□□ -2.46
ABCD3P28288 U3.27-201ENST00000391237 200 ntBASIC-0.3□□□□□ -2.46
ABCD3P28288 SNORD4A-201ENST00000459174 72 ntBASIC-0.3□□□□□ -2.46
ABCD3P28288 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.3□□□□□ -2.46
ABCD3P28288 SNORD114-28-201ENST00000363610 72 ntBASIC-0.31□□□□□ -2.46
ABCD3P28288 SNORD114-12-201ENST00000365400 75 ntBASIC-0.31□□□□□ -2.46
ABCD3P28288 MIR604-201ENST00000384880 94 ntBASIC-0.31□□□□□ -2.46
ABCD3P28288 RNA5SP25-201ENST00000410815 110 ntBASIC-0.31□□□□□ -2.46
ABCD3P28288 RNU6-320P-201ENST00000516511 106 ntBASIC-0.31□□□□□ -2.46
ABCD3P28288 MIR548O2-201ENST00000616090 70 ntBASIC-0.31□□□□□ -2.46
ABCD3P28288 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.32□□□□□ -2.46
ABCD3P28288 RNA5SP368-201ENST00000364298 116 ntBASIC-0.32□□□□□ -2.46
ABCD3P28288 MIR548AE1-201ENST00000583292 70 ntBASIC-0.32□□□□□ -2.46
ABCD3P28288 AC103810.7-201ENST00000607821 91 ntBASIC-0.32□□□□□ -2.46
ABCD3P28288 RN7SL660P-201ENST00000614852 299 ntBASIC-0.32□□□□□ -2.46
ABCD3P28288 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.33□□□□□ -2.46
ABCD3P28288 MIR451A-201ENST00000385059 72 ntBASIC-0.33□□□□□ -2.46
ABCD3P28288 snoU13.19-201ENST00000459148 104 ntBASIC-0.33□□□□□ -2.46
ABCD3P28288 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.33□□□□□ -2.46
ABCD3P28288 MIR101-1-201ENST00000362265 75 ntBASIC-0.34□□□□□ -2.46
ABCD3P28288 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.34□□□□□ -2.46
ABCD3P28288 RNU6-476P-201ENST00000384726 107 ntBASIC-0.34□□□□□ -2.46
ABCD3P28288 AC096531.1-201ENST00000419107 107 ntBASIC-0.34□□□□□ -2.46
ABCD3P28288 MIR8064-201ENST00000612863 90 ntBASIC-0.34□□□□□ -2.46
ABCD3P28288 MIR20A-201ENST00000362279 71 ntBASIC-0.35□□□□□ -2.47
ABCD3P28288 RNA5SP275-201ENST00000363936 118 ntBASIC-0.35□□□□□ -2.47
ABCD3P28288 RNY4P3-201ENST00000365254 95 ntBASIC-0.35□□□□□ -2.47
ABCD3P28288 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.35□□□□□ -2.47
ABCD3P28288 MIR196A2-201ENST00000385189 110 ntBASIC-0.35□□□□□ -2.47
ABCD3P28288 MIR548U-201ENST00000390728 81 ntBASIC-0.35□□□□□ -2.47
ABCD3P28288 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.35□□□□□ -2.47
ABCD3P28288 SCARNA23-201ENST00000516060 130 ntBASIC-0.35□□□□□ -2.47
ABCD3P28288 MIR4777-201ENST00000583710 86 ntBASIC-0.35□□□□□ -2.47
ABCD3P28288 MIR1302-5-201ENST00000408164 150 ntBASIC-0.36□□□□□ -2.47
ABCD3P28288 RNU7-85P-201ENST00000458851 63 ntBASIC-0.36□□□□□ -2.47
ABCD3P28288 RNU6-904P-201ENST00000516206 101 ntBASIC-0.36□□□□□ -2.47
ABCD3P28288 RNU6-62P-201ENST00000516526 102 ntBASIC-0.36□□□□□ -2.47
ABCD3P28288 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.36□□□□□ -2.47
ABCD3P28288 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.36□□□□□ -2.47
ABCD3P28288 MIR655-201ENST00000362159 97 ntBASIC-0.37□□□□□ -2.47
ABCD3P28288 RNU6-834P-201ENST00000362367 110 ntBASIC-0.37□□□□□ -2.47
ABCD3P28288 SNORD49B-201ENST00000365172 72 ntBASIC-0.37□□□□□ -2.47
ABCD3P28288 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.37□□□□□ -2.47
ABCD3P28288 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.37□□□□□ -2.47
ABCD3P28288 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
ABCD3P28288 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.37□□□□□ -2.47
ABCD3P28288 AC244090.1-201ENST00000441884 93 ntBASIC-0.37□□□□□ -2.47
ABCD3P28288 AC108676.2-201ENST00000605225 163 ntBASIC-0.37□□□□□ -2.47
ABCD3P28288 AL365222.1-201ENST00000614661 98 ntBASIC-0.37□□□□□ -2.47
ABCD3P28288 SNORD114-11-201ENST00000363738 75 ntBASIC-0.38□□□□□ -2.47
ABCD3P28288 SNORD114-15-201ENST00000364687 72 ntBASIC-0.38□□□□□ -2.47
ABCD3P28288 RNU6-972P-201ENST00000391208 107 ntBASIC-0.38□□□□□ -2.47
ABCD3P28288 SNORD126-201ENST00000459475 77 ntBASIC-0.38□□□□□ -2.47
ABCD3P28288 RNU6-795P-201ENST00000516323 103 ntBASIC-0.38□□□□□ -2.47
ABCD3P28288 MIR3666-201ENST00000607845 111 ntBASIC-0.38□□□□□ -2.47
ABCD3P28288 AC012531.4-201ENST00000616509 177 ntBASIC-0.38□□□□□ -2.47
ABCD3P28288 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.39□□□□□ -2.47
ABCD3P28288 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.39□□□□□ -2.47
ABCD3P28288 RNU6-30P-201ENST00000384561 107 ntBASIC-0.39□□□□□ -2.47
ABCD3P28288 RNA5SP451-201ENST00000410588 110 ntBASIC-0.39□□□□□ -2.47
ABCD3P28288 SNORD114-4-201ENST00000363962 75 ntBASIC-0.4□□□□□ -2.47
ABCD3P28288 RNA5SP205-201ENST00000364653 136 ntBASIC-0.4□□□□□ -2.47
ABCD3P28288 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.4□□□□□ -2.47
ABCD3P28288 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.4□□□□□ -2.47
ABCD3P28288 RNU6-519P-201ENST00000410590 108 ntBASIC-0.4□□□□□ -2.47
ABCD3P28288 RNU6-175P-201ENST00000516896 107 ntBASIC-0.4□□□□□ -2.47
ABCD3P28288 MIR4263-201ENST00000584745 83 ntBASIC-0.4□□□□□ -2.47
ABCD3P28288 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.41□□□□□ -2.48
ABCD3P28288 RNU6-22P-201ENST00000384355 107 ntBASIC-0.41□□□□□ -2.48
ABCD3P28288 MIR652-201ENST00000385278 98 ntBASIC-0.41□□□□□ -2.48
ABCD3P28288 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.41□□□□□ -2.48
ABCD3P28288 SNORD4B-201ENST00000459083 72 ntBASIC-0.41□□□□□ -2.48
ABCD3P28288 RNU6-887P-201ENST00000410660 100 ntBASIC-0.42□□□□□ -2.48
ABCD3P28288 AC244250.2-201ENST00000418731 148 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms