Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNU6-940P-201ENST00000363433 104 ntBASIC1.8□□□□□ -2.12
VARSP26640 SNORA7.1-201ENST00000363750 139 ntBASIC1.8□□□□□ -2.12
VARSP26640 RNA5SP299-201ENST00000391203 116 ntBASIC1.8□□□□□ -2.12
VARSP26640 SCARNA21.1-201ENST00000515996 128 ntBASIC1.8□□□□□ -2.12
VARSP26640 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
VARSP26640 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
VARSP26640 RNU6-1335P-201ENST00000365426 107 ntBASIC1.79□□□□□ -2.12
VARSP26640 MIR222-201ENST00000384992 110 ntBASIC1.79□□□□□ -2.12
VARSP26640 RNU6-469P-201ENST00000516253 101 ntBASIC1.79□□□□□ -2.12
VARSP26640 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
VARSP26640 RNU6-656P-201ENST00000516785 107 ntBASIC1.79□□□□□ -2.12
VARSP26640 MIR4460-201ENST00000577862 86 ntBASIC1.79□□□□□ -2.12
VARSP26640 MIR4639-201ENST00000584938 69 ntBASIC1.79□□□□□ -2.12
VARSP26640 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VARSP26640 Y_RNA.236-201ENST00000364427 111 ntBASIC1.78□□□□□ -2.12
VARSP26640 SNORD28-201ENST00000384706 75 ntBASIC1.78□□□□□ -2.12
VARSP26640 SNORD41.1-201ENST00000391000 69 ntBASIC1.78□□□□□ -2.12
VARSP26640 MIR1287-201ENST00000408492 90 ntBASIC1.78□□□□□ -2.12
VARSP26640 AC108667.1-201ENST00000428618 249 ntBASIC1.78□□□□□ -2.12
VARSP26640 RNU6-135P-201ENST00000516769 101 ntBASIC1.78□□□□□ -2.12
VARSP26640 SNORA40.17-201ENST00000517256 115 ntBASIC1.78□□□□□ -2.12
VARSP26640 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.78□□□□□ -2.12
VARSP26640 MT-TY-201ENST00000387409 66 ntBASIC1.77□□□□□ -2.13
VARSP26640 AC002429.1-201ENST00000437672 148 ntBASIC1.77□□□□□ -2.13
VARSP26640 RNA5SP215-201ENST00000363440 122 ntBASIC1.76□□□□□ -2.13
VARSP26640 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
VARSP26640 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
VARSP26640 SNORD89-201ENST00000390981 114 ntBASIC1.76□□□□□ -2.13
VARSP26640 SNORD12-201ENST00000391002 90 ntBASIC1.76□□□□□ -2.13
VARSP26640 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
VARSP26640 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.75□□□□□ -2.13
VARSP26640 RNU6-1089P-201ENST00000516473 104 ntBASIC1.75□□□□□ -2.13
VARSP26640 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
VARSP26640 MIR6739-201ENST00000622461 75 ntBASIC1.75□□□□□ -2.13
VARSP26640 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
VARSP26640 MIR548V-201ENST00000584165 80 ntBASIC1.74□□□□□ -2.13
VARSP26640 RNU6-716P-201ENST00000365621 103 ntBASIC1.73□□□□□ -2.13
VARSP26640 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
VARSP26640 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
VARSP26640 RNU1-141P-201ENST00000364623 158 ntBASIC1.72□□□□□ -2.13
VARSP26640 RNU6-726P-201ENST00000364680 107 ntBASIC1.72□□□□□ -2.13
VARSP26640 RNU5B-6P-201ENST00000516765 68 ntBASIC1.72□□□□□ -2.13
VARSP26640 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
VARSP26640 MIR548C-201ENST00000384815 97 ntBASIC1.71□□□□□ -2.14
VARSP26640 MIR499A-201ENST00000384903 122 ntBASIC1.71□□□□□ -2.14
VARSP26640 SNORD105-201ENST00000386910 85 ntBASIC1.71□□□□□ -2.14
VARSP26640 RNU6-321P-201ENST00000410912 106 ntBASIC1.71□□□□□ -2.14
VARSP26640 AC018659.1-201ENST00000551083 169 ntBASIC1.71□□□□□ -2.14
VARSP26640 SNORD18A-201ENST00000363753 72 ntBASIC1.7□□□□□ -2.14
VARSP26640 snoU13.13-201ENST00000458842 104 ntBASIC1.7□□□□□ -2.14
VARSP26640 RNU6-1110P-201ENST00000516462 101 ntBASIC1.7□□□□□ -2.14
VARSP26640 RNA5SP47-201ENST00000517230 109 ntBASIC1.7□□□□□ -2.14
VARSP26640 AC084768.2-201ENST00000622736 221 ntBASIC1.7□□□□□ -2.14
VARSP26640 SNORD114-4-201ENST00000363962 75 ntBASIC1.69□□□□□ -2.14
VARSP26640 RNU6-302P-201ENST00000365249 107 ntBASIC1.69□□□□□ -2.14
VARSP26640 RNU6-1162P-201ENST00000384443 104 ntBASIC1.69□□□□□ -2.14
VARSP26640 TRMT112P2-201ENST00000512910 132 ntBASIC1.69□□□□□ -2.14
VARSP26640 RNU6-92P-201ENST00000605893 104 ntBASIC1.69□□□□□ -2.14
VARSP26640 RNU6-446P-201ENST00000362827 106 ntBASIC1.68□□□□□ -2.14
VARSP26640 SNORA25-201ENST00000384384 134 ntBASIC1.68□□□□□ -2.14
VARSP26640 RNU6-269P-201ENST00000391077 97 ntBASIC1.68□□□□□ -2.14
VARSP26640 AL157398.1-201ENST00000452981 186 ntBASIC1.68□□□□□ -2.14
VARSP26640 MIR3678-201ENST00000578455 94 ntBASIC1.68□□□□□ -2.14
VARSP26640 MIR8081-201ENST00000611533 95 ntBASIC1.68□□□□□ -2.14
VARSP26640 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
VARSP26640 SNORA75.1-201ENST00000391130 148 ntBASIC1.67□□□□□ -2.14
VARSP26640 RNU6-122P-201ENST00000516818 107 ntBASIC1.67□□□□□ -2.14
VARSP26640 RNA5SP327-201ENST00000362494 101 ntBASIC1.66□□□□□ -2.14
VARSP26640 Y_RNA.250-201ENST00000364542 110 ntBASIC1.66□□□□□ -2.14
VARSP26640 AP1B1P2-201ENST00000416196 106 ntBASIC1.66□□□□□ -2.14
VARSP26640 RNU1-92P-201ENST00000517017 135 ntBASIC1.66□□□□□ -2.14
VARSP26640 MIR3938-201ENST00000582157 103 ntBASIC1.66□□□□□ -2.14
VARSP26640 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.66□□□□□ -2.14
VARSP26640 MIR521-2-201ENST00000384818 87 ntBASIC1.65□□□□□ -2.15
VARSP26640 MIR630-201ENST00000384957 97 ntBASIC1.65□□□□□ -2.15
VARSP26640 FABP5P4-201ENST00000437203 171 ntBASIC1.65□□□□□ -2.15
VARSP26640 RPS29P23-201ENST00000458635 123 ntBASIC1.65□□□□□ -2.15
VARSP26640 RNA5SP484-201ENST00000458857 111 ntBASIC1.65□□□□□ -2.15
VARSP26640 U7.7-201ENST00000459276 60 ntBASIC1.65□□□□□ -2.15
VARSP26640 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
VARSP26640 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.65□□□□□ -2.15
VARSP26640 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VARSP26640 SNORA8.2-201ENST00000384372 139 ntBASIC1.64□□□□□ -2.15
VARSP26640 MIR7978-201ENST00000636158 59 ntBASIC1.64□□□□□ -2.15
VARSP26640 SNORD26-201ENST00000384147 75 ntBASIC1.63□□□□□ -2.15
VARSP26640 Y_RNA.722-201ENST00000517279 114 ntBASIC1.63□□□□□ -2.15
VARSP26640 MIR3612-201ENST00000579753 87 ntBASIC1.63□□□□□ -2.15
VARSP26640 SNORD60.1-201ENST00000362451 73 ntBASIC1.62□□□□□ -2.15
VARSP26640 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
VARSP26640 SNORA17.3-201ENST00000391159 129 ntBASIC1.62□□□□□ -2.15
VARSP26640 SCARNA16.5-201ENST00000517114 183 ntBASIC1.62□□□□□ -2.15
VARSP26640 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
VARSP26640 MIR573-201ENST00000384964 99 ntBASIC1.61□□□□□ -2.15
VARSP26640 AC021146.9-201ENST00000512503 156 ntBASIC1.61□□□□□ -2.15
VARSP26640 SNORD53B-201ENST00000577887 78 ntBASIC1.61□□□□□ -2.15
VARSP26640 MIR8070-201ENST00000616510 88 ntBASIC1.61□□□□□ -2.15
VARSP26640 MIR7111-201ENST00000619751 72 ntBASIC1.61□□□□□ -2.15
VARSP26640 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
VARSP26640 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
VARSP26640 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 229.3 ms