Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 Y_RNA.224-201ENST00000364308 111 ntBASIC0.6□□□□□ -2.31
PTX3P26022 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
PTX3P26022 RNY4P29-201ENST00000410801 97 ntBASIC0.6□□□□□ -2.31
PTX3P26022 RNA5SP484-201ENST00000458857 111 ntBASIC0.6□□□□□ -2.31
PTX3P26022 RNA5SP220-201ENST00000516298 104 ntBASIC0.6□□□□□ -2.31
PTX3P26022 MIR4460-201ENST00000577862 86 ntBASIC0.6□□□□□ -2.31
PTX3P26022 MIR548O2-201ENST00000616090 70 ntBASIC0.6□□□□□ -2.31
PTX3P26022 RNU6-624P-201ENST00000363411 107 ntBASIC0.59□□□□□ -2.31
PTX3P26022 AC069503.3-201ENST00000618674 145 ntBASIC0.59□□□□□ -2.31
PTX3P26022 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
PTX3P26022 MT-TY-201ENST00000387409 66 ntBASIC0.58□□□□□ -2.32
PTX3P26022 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
PTX3P26022 NAMPTP3-201ENST00000569273 224 ntBASIC0.58□□□□□ -2.32
PTX3P26022 MIR4452-201ENST00000583004 71 ntBASIC0.58□□□□□ -2.32
PTX3P26022 MIR6734-201ENST00000621166 68 ntBASIC0.58□□□□□ -2.32
PTX3P26022 Y_RNA.264-201ENST00000364665 102 ntBASIC0.57□□□□□ -2.32
PTX3P26022 RNU6-1276P-201ENST00000365372 104 ntBASIC0.57□□□□□ -2.32
PTX3P26022 SNORD110-201ENST00000408189 75 ntBASIC0.57□□□□□ -2.32
PTX3P26022 AC006210.1-201ENST00000424882 111 ntBASIC0.57□□□□□ -2.32
PTX3P26022 RPS29P1-201ENST00000465274 159 ntBASIC0.57□□□□□ -2.32
PTX3P26022 Y_RNA.660-201ENST00000516002 120 ntBASIC0.57□□□□□ -2.32
PTX3P26022 MIR3140-201ENST00000583685 90 ntBASIC0.57□□□□□ -2.32
PTX3P26022 U7.6-201ENST00000610841 64 ntBASIC0.57□□□□□ -2.32
PTX3P26022 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
PTX3P26022 SNORA2A-201ENST00000383885 135 ntBASIC0.56□□□□□ -2.32
PTX3P26022 RNU6-42P-201ENST00000384165 107 ntBASIC0.56□□□□□ -2.32
PTX3P26022 SNORA24B-201ENST00000384176 131 ntBASIC0.56□□□□□ -2.32
PTX3P26022 RNU6-557P-201ENST00000516842 110 ntBASIC0.56□□□□□ -2.32
PTX3P26022 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
PTX3P26022 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
PTX3P26022 SNORD44.1-201ENST00000363202 61 ntBASIC0.55□□□□□ -2.32
PTX3P26022 SNORD90-201ENST00000391145 111 ntBASIC0.55□□□□□ -2.32
PTX3P26022 RNU6-1052P-201ENST00000411398 104 ntBASIC0.55□□□□□ -2.32
PTX3P26022 RNU6-719P-201ENST00000516671 104 ntBASIC0.55□□□□□ -2.32
PTX3P26022 RNU1-29P-201ENST00000606574 126 ntBASIC0.55□□□□□ -2.32
PTX3P26022 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.55□□□□□ -2.32
PTX3P26022 SNORD77.2-201ENST00000391045 68 ntBASIC0.54□□□□□ -2.32
PTX3P26022 MIR1287-201ENST00000408492 90 ntBASIC0.54□□□□□ -2.32
PTX3P26022 RNA5SP247-201ENST00000411181 105 ntBASIC0.54□□□□□ -2.32
PTX3P26022 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
PTX3P26022 SNORA68.3-201ENST00000515906 83 ntBASIC0.54□□□□□ -2.32
PTX3P26022 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.54□□□□□ -2.32
PTX3P26022 SNORA72.7-201ENST00000516349 94 ntBASIC0.54□□□□□ -2.32
PTX3P26022 MIR4752-201ENST00000579672 72 ntBASIC0.54□□□□□ -2.32
PTX3P26022 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
PTX3P26022 Y_RNA.388-201ENST00000383919 113 ntBASIC0.53□□□□□ -2.32
PTX3P26022 Y_RNA.423-201ENST00000384057 113 ntBASIC0.53□□□□□ -2.32
PTX3P26022 RNU6-1177P-201ENST00000391058 104 ntBASIC0.53□□□□□ -2.32
PTX3P26022 MIR548J-201ENST00000408833 112 ntBASIC0.53□□□□□ -2.32
PTX3P26022 AL450471.1-201ENST00000447509 127 ntBASIC0.53□□□□□ -2.32
PTX3P26022 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
PTX3P26022 SNORA70.25-201ENST00000612741 95 ntBASIC0.53□□□□□ -2.32
PTX3P26022 MIR6788-201ENST00000618842 66 ntBASIC0.53□□□□□ -2.32
PTX3P26022 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
PTX3P26022 MIRLET7D-201ENST00000362263 87 ntBASIC0.52□□□□□ -2.33
PTX3P26022 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
PTX3P26022 RNU6-129P-201ENST00000391022 107 ntBASIC0.52□□□□□ -2.33
PTX3P26022 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.52□□□□□ -2.33
PTX3P26022 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.52□□□□□ -2.33
PTX3P26022 AC097510.1-201ENST00000510945 133 ntBASIC0.52□□□□□ -2.33
PTX3P26022 RNU6-208P-201ENST00000362431 107 ntBASIC0.51□□□□□ -2.33
PTX3P26022 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.51□□□□□ -2.33
PTX3P26022 RNU6V-201ENST00000384105 107 ntBASIC0.51□□□□□ -2.33
PTX3P26022 MIR216A-201ENST00000385063 110 ntBASIC0.51□□□□□ -2.33
PTX3P26022 RNU6-592P-201ENST00000411333 103 ntBASIC0.51□□□□□ -2.33
PTX3P26022 snoU13.17-201ENST00000458802 104 ntBASIC0.51□□□□□ -2.33
PTX3P26022 MIR4666B-201ENST00000578142 81 ntBASIC0.51□□□□□ -2.33
PTX3P26022 YWHAEP2-201ENST00000580066 112 ntBASIC0.51□□□□□ -2.33
PTX3P26022 MIR4714-201ENST00000580728 77 ntBASIC0.51□□□□□ -2.33
PTX3P26022 MIR151B-201ENST00000584249 96 ntBASIC0.51□□□□□ -2.33
PTX3P26022 MIR6755-201ENST00000619993 66 ntBASIC0.51□□□□□ -2.33
PTX3P26022 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
PTX3P26022 Y_RNA.226-201ENST00000364337 114 ntBASIC0.49□□□□□ -2.33
PTX3P26022 RNU7-24P-201ENST00000458867 62 ntBASIC0.49□□□□□ -2.33
PTX3P26022 RNU6-1223P-201ENST00000517124 104 ntBASIC0.49□□□□□ -2.33
PTX3P26022 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
PTX3P26022 MIR3202-2-201ENST00000635980 79 ntBASIC0.49□□□□□ -2.33
PTX3P26022 RNU6-686P-201ENST00000364839 107 ntBASIC0.48□□□□□ -2.33
PTX3P26022 RNA5SP173-201ENST00000364857 136 ntBASIC0.48□□□□□ -2.33
PTX3P26022 Y_RNA.316-201ENST00000365118 111 ntBASIC0.48□□□□□ -2.33
PTX3P26022 MIR5000-201ENST00000577717 103 ntBASIC0.48□□□□□ -2.33
PTX3P26022 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
PTX3P26022 RNU6-315P-201ENST00000362666 107 ntBASIC0.47□□□□□ -2.33
PTX3P26022 RNU6-161P-201ENST00000363051 106 ntBASIC0.47□□□□□ -2.33
PTX3P26022 Y_RNA.125-201ENST00000363371 111 ntBASIC0.47□□□□□ -2.33
PTX3P26022 Y_RNA.437-201ENST00000384113 113 ntBASIC0.47□□□□□ -2.33
PTX3P26022 MIR760-201ENST00000390220 80 ntBASIC0.47□□□□□ -2.33
PTX3P26022 RNU6-380P-201ENST00000410207 107 ntBASIC0.47□□□□□ -2.33
PTX3P26022 Y_RNA.606-201ENST00000410579 103 ntBASIC0.47□□□□□ -2.33
PTX3P26022 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
PTX3P26022 snoU13.18-201ENST00000459483 104 ntBASIC0.47□□□□□ -2.33
PTX3P26022 RNU6-1108P-201ENST00000516308 104 ntBASIC0.47□□□□□ -2.33
PTX3P26022 RNU5B-6P-201ENST00000516765 68 ntBASIC0.47□□□□□ -2.33
PTX3P26022 RNU6-495P-201ENST00000362995 107 ntBASIC0.46□□□□□ -2.34
PTX3P26022 SNORD114-4-201ENST00000363962 75 ntBASIC0.46□□□□□ -2.34
PTX3P26022 Y_RNA.219-201ENST00000364232 113 ntBASIC0.46□□□□□ -2.34
PTX3P26022 RNA5SP128-201ENST00000365305 116 ntBASIC0.46□□□□□ -2.34
PTX3P26022 Y_RNA.407-201ENST00000383986 113 ntBASIC0.46□□□□□ -2.34
PTX3P26022 SNORD75.2-201ENST00000408784 58 ntBASIC0.46□□□□□ -2.34
PTX3P26022 U6.81-201ENST00000612550 106 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms