Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 Y_RNA.423-201ENST00000384057 113 ntBASIC0.58□□□□□ -2.32
CD40P25942 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CD40P25942 AC093423.1-201ENST00000440817 142 ntBASIC0.58□□□□□ -2.32
CD40P25942 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.58□□□□□ -2.32
CD40P25942 SNORA70.25-201ENST00000612741 95 ntBASIC0.58□□□□□ -2.32
CD40P25942 SNORD73B-201ENST00000364394 72 ntBASIC0.57□□□□□ -2.32
CD40P25942 AC093729.1-201ENST00000513074 128 ntBASIC0.57□□□□□ -2.32
CD40P25942 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.57□□□□□ -2.32
CD40P25942 MIR4460-201ENST00000577862 86 ntBASIC0.57□□□□□ -2.32
CD40P25942 MIR3140-201ENST00000583685 90 ntBASIC0.57□□□□□ -2.32
CD40P25942 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
CD40P25942 SNORA63.2-201ENST00000362603 126 ntBASIC0.56□□□□□ -2.32
CD40P25942 MIR598-201ENST00000384868 97 ntBASIC0.56□□□□□ -2.32
CD40P25942 MIR216B-201ENST00000390186 82 ntBASIC0.56□□□□□ -2.32
CD40P25942 U3.27-201ENST00000391237 200 ntBASIC0.56□□□□□ -2.32
CD40P25942 AC006210.1-201ENST00000424882 111 ntBASIC0.56□□□□□ -2.32
CD40P25942 RNA5SP436-201ENST00000516020 115 ntBASIC0.56□□□□□ -2.32
CD40P25942 MIR4679-1-201ENST00000637619 75 ntBASIC0.56□□□□□ -2.32
CD40P25942 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CD40P25942 RNY4P3-201ENST00000365254 95 ntBASIC0.55□□□□□ -2.32
CD40P25942 AC022137.1-201ENST00000483735 151 ntBASIC0.55□□□□□ -2.32
CD40P25942 SNORA25.13-201ENST00000516395 103 ntBASIC0.55□□□□□ -2.32
CD40P25942 AC062037.1-201ENST00000605302 128 ntBASIC0.55□□□□□ -2.32
CD40P25942 RNU1-29P-201ENST00000606574 126 ntBASIC0.55□□□□□ -2.32
CD40P25942 SNORD44.1-201ENST00000363202 61 ntBASIC0.54□□□□□ -2.32
CD40P25942 SNORD110-201ENST00000408189 75 ntBASIC0.54□□□□□ -2.32
CD40P25942 MIR6755-201ENST00000619993 66 ntBASIC0.54□□□□□ -2.32
CD40P25942 MIR103A1-201ENST00000362165 78 ntBASIC0.53□□□□□ -2.32
CD40P25942 MIRLET7D-201ENST00000362263 87 ntBASIC0.53□□□□□ -2.32
CD40P25942 SNORA2A-201ENST00000383885 135 ntBASIC0.53□□□□□ -2.32
CD40P25942 MT-TY-201ENST00000387409 66 ntBASIC0.53□□□□□ -2.32
CD40P25942 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
CD40P25942 MIR5588-201ENST00000581890 63 ntBASIC0.53□□□□□ -2.32
CD40P25942 MIR6513-201ENST00000621188 64 ntBASIC0.53□□□□□ -2.32
CD40P25942 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.53□□□□□ -2.32
CD40P25942 AC006160.2-201ENST00000637708 154 ntBASIC0.53□□□□□ -2.32
CD40P25942 RNU5F-1-201ENST00000362507 117 ntBASIC0.52□□□□□ -2.33
CD40P25942 MIR548O2-201ENST00000616090 70 ntBASIC0.52□□□□□ -2.33
CD40P25942 PVT1_3.1-201ENST00000620853 95 ntBASIC0.52□□□□□ -2.33
CD40P25942 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
CD40P25942 RNU6-820P-201ENST00000384273 107 ntBASIC0.51□□□□□ -2.33
CD40P25942 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.51□□□□□ -2.33
CD40P25942 YWHAEP2-201ENST00000580066 112 ntBASIC0.51□□□□□ -2.33
CD40P25942 AC069503.3-201ENST00000618674 145 ntBASIC0.51□□□□□ -2.33
CD40P25942 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
CD40P25942 RNU6-979P-201ENST00000383896 107 ntBASIC0.5□□□□□ -2.33
CD40P25942 Y_RNA.426-201ENST00000384068 113 ntBASIC0.5□□□□□ -2.33
CD40P25942 RNU6V-201ENST00000384105 107 ntBASIC0.5□□□□□ -2.33
CD40P25942 RNU6-863P-201ENST00000515989 104 ntBASIC0.5□□□□□ -2.33
CD40P25942 RNU5B-6P-201ENST00000516765 68 ntBASIC0.5□□□□□ -2.33
CD40P25942 AC140658.3-201ENST00000567603 271 ntBASIC0.5□□□□□ -2.33
CD40P25942 MIR5706-201ENST00000579841 80 ntBASIC0.5□□□□□ -2.33
CD40P25942 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
CD40P25942 SNORA24B-201ENST00000384176 131 ntBASIC0.49□□□□□ -2.33
CD40P25942 RNU6-242P-201ENST00000384359 107 ntBASIC0.49□□□□□ -2.33
CD40P25942 MIR760-201ENST00000390220 80 ntBASIC0.49□□□□□ -2.33
CD40P25942 SNORA26.2-201ENST00000390922 122 ntBASIC0.49□□□□□ -2.33
CD40P25942 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.49□□□□□ -2.33
CD40P25942 RNY4P29-201ENST00000410801 97 ntBASIC0.48□□□□□ -2.33
CD40P25942 RNU7-129P-201ENST00000516128 62 ntBASIC0.48□□□□□ -2.33
CD40P25942 RNU6-1232P-201ENST00000516299 86 ntBASIC0.48□□□□□ -2.33
CD40P25942 MIR4473-201ENST00000583731 91 ntBASIC0.48□□□□□ -2.33
CD40P25942 RNU6-54P-201ENST00000365563 107 ntBASIC0.47□□□□□ -2.33
CD40P25942 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
CD40P25942 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
CD40P25942 Y_RNA.607-201ENST00000410597 98 ntBASIC0.47□□□□□ -2.33
CD40P25942 snoU13.17-201ENST00000458802 104 ntBASIC0.47□□□□□ -2.33
CD40P25942 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
CD40P25942 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
CD40P25942 RNU6-848P-201ENST00000515948 107 ntBASIC0.46□□□□□ -2.34
CD40P25942 RNU6-617P-201ENST00000516147 107 ntBASIC0.46□□□□□ -2.34
CD40P25942 RNU6-473P-201ENST00000516164 107 ntBASIC0.46□□□□□ -2.34
CD40P25942 RNU6-1049P-201ENST00000516414 107 ntBASIC0.46□□□□□ -2.34
CD40P25942 MIR216A-201ENST00000385063 110 ntBASIC0.45□□□□□ -2.34
CD40P25942 RNU6-1177P-201ENST00000391058 104 ntBASIC0.45□□□□□ -2.34
CD40P25942 HMGN2P22-201ENST00000427588 175 ntBASIC0.45□□□□□ -2.34
CD40P25942 AL450471.1-201ENST00000447509 127 ntBASIC0.45□□□□□ -2.34
CD40P25942 RNU6-1108P-201ENST00000516308 104 ntBASIC0.45□□□□□ -2.34
CD40P25942 U7.6-201ENST00000610841 64 ntBASIC0.45□□□□□ -2.34
CD40P25942 RNU6-161P-201ENST00000363051 106 ntBASIC0.44□□□□□ -2.34
CD40P25942 RNU6-1276P-201ENST00000365372 104 ntBASIC0.44□□□□□ -2.34
CD40P25942 Y_RNA.388-201ENST00000383919 113 ntBASIC0.44□□□□□ -2.34
CD40P25942 Y_RNA.540-201ENST00000384638 111 ntBASIC0.44□□□□□ -2.34
CD40P25942 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CD40P25942 AC073261.1-201ENST00000429409 121 ntBASIC0.44□□□□□ -2.34
CD40P25942 RNU7-171P-201ENST00000459581 62 ntBASIC0.44□□□□□ -2.34
CD40P25942 MIR4711-201ENST00000578274 70 ntBASIC0.44□□□□□ -2.34
CD40P25942 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
CD40P25942 RNU6-208P-201ENST00000362431 107 ntBASIC0.43□□□□□ -2.34
CD40P25942 RNU6-624P-201ENST00000363411 107 ntBASIC0.43□□□□□ -2.34
CD40P25942 RNA5SP62-201ENST00000363457 110 ntBASIC0.43□□□□□ -2.34
CD40P25942 RNA5SP128-201ENST00000365305 116 ntBASIC0.43□□□□□ -2.34
CD40P25942 RNU6-815P-201ENST00000384080 113 ntBASIC0.43□□□□□ -2.34
CD40P25942 SNORD77.2-201ENST00000391045 68 ntBASIC0.43□□□□□ -2.34
CD40P25942 MIR1302-4-201ENST00000408701 150 ntBASIC0.43□□□□□ -2.34
CD40P25942 RNU6-592P-201ENST00000411333 103 ntBASIC0.43□□□□□ -2.34
CD40P25942 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
CD40P25942 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
CD40P25942 Y_RNA.437-201ENST00000384113 113 ntBASIC0.42□□□□□ -2.34
CD40P25942 RNU6-1152P-201ENST00000384576 107 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms