Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 SNORA40.17-201ENST00000517256 115 ntBASIC1.87□□□□□ -2.11
ITGA6P23229 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.87□□□□□ -2.11
ITGA6P23229 RNA5SP117-201ENST00000365294 118 ntBASIC1.86□□□□□ -2.11
ITGA6P23229 SNORA75.1-201ENST00000391130 148 ntBASIC1.86□□□□□ -2.11
ITGA6P23229 RNU1-123P-201ENST00000458950 160 ntBASIC1.86□□□□□ -2.11
ITGA6P23229 MIR4781-201ENST00000585250 76 ntBASIC1.86□□□□□ -2.11
ITGA6P23229 RNU6-990P-201ENST00000364385 104 ntBASIC1.85□□□□□ -2.11
ITGA6P23229 RNU6-302P-201ENST00000365249 107 ntBASIC1.85□□□□□ -2.11
ITGA6P23229 AL591704.2-201ENST00000421658 181 ntBASIC1.85□□□□□ -2.11
ITGA6P23229 MIR6739-201ENST00000622461 75 ntBASIC1.85□□□□□ -2.11
ITGA6P23229 AC067863.3-201ENST00000624172 122 ntBASIC1.85□□□□□ -2.11
ITGA6P23229 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 MIR100-201ENST00000385259 80 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 MIR934-201ENST00000401241 83 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 AL354695.1-201ENST00000427935 228 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 RNU7-21P-201ENST00000459430 62 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 RN7SKP88-201ENST00000516847 250 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 MIR548V-201ENST00000584165 80 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 7SK.8-201ENST00000612110 250 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 7SK.11-201ENST00000615477 250 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 7SK.13-201ENST00000622040 250 ntBASIC1.84□□□□□ -2.11
ITGA6P23229 SNORD60.1-201ENST00000362451 73 ntBASIC1.83□□□□□ -2.12
ITGA6P23229 MIR1304-201ENST00000408243 91 ntBASIC1.83□□□□□ -2.12
ITGA6P23229 MIR520F-201ENST00000384824 87 ntBASIC1.82□□□□□ -2.12
ITGA6P23229 TRMT112P2-201ENST00000512910 132 ntBASIC1.82□□□□□ -2.12
ITGA6P23229 MIR4421-201ENST00000578133 69 ntBASIC1.82□□□□□ -2.12
ITGA6P23229 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ITGA6P23229 MIR1-1-201ENST00000362147 71 ntBASIC1.81□□□□□ -2.12
ITGA6P23229 RNU1-78P-201ENST00000391248 165 ntBASIC1.81□□□□□ -2.12
ITGA6P23229 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
ITGA6P23229 MIR4422-201ENST00000581938 83 ntBASIC1.81□□□□□ -2.12
ITGA6P23229 SNORA7.1-201ENST00000363750 139 ntBASIC1.8□□□□□ -2.12
ITGA6P23229 SNORA80D-201ENST00000384488 135 ntBASIC1.8□□□□□ -2.12
ITGA6P23229 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.8□□□□□ -2.12
ITGA6P23229 RNU7-74P-201ENST00000459104 62 ntBASIC1.8□□□□□ -2.12
ITGA6P23229 RNU1-92P-201ENST00000517017 135 ntBASIC1.8□□□□□ -2.12
ITGA6P23229 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.8□□□□□ -2.12
ITGA6P23229 AL136317.1-201ENST00000612653 226 ntBASIC1.8□□□□□ -2.12
ITGA6P23229 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ITGA6P23229 RNU7-90P-201ENST00000459216 62 ntBASIC1.79□□□□□ -2.12
ITGA6P23229 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
ITGA6P23229 MIR630-201ENST00000384957 97 ntBASIC1.78□□□□□ -2.12
ITGA6P23229 MT-TY-201ENST00000387409 66 ntBASIC1.78□□□□□ -2.12
ITGA6P23229 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.78□□□□□ -2.12
ITGA6P23229 AL157398.1-201ENST00000452981 186 ntBASIC1.78□□□□□ -2.12
ITGA6P23229 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.78□□□□□ -2.12
ITGA6P23229 AC018659.1-201ENST00000551083 169 ntBASIC1.78□□□□□ -2.12
ITGA6P23229 MIR548C-201ENST00000384815 97 ntBASIC1.77□□□□□ -2.13
ITGA6P23229 RNU6-910P-201ENST00000390844 107 ntBASIC1.77□□□□□ -2.13
ITGA6P23229 RNU6-1312P-201ENST00000362425 108 ntBASIC1.76□□□□□ -2.13
ITGA6P23229 Y_RNA.250-201ENST00000364542 110 ntBASIC1.76□□□□□ -2.13
ITGA6P23229 Y_RNA.327-201ENST00000365201 102 ntBASIC1.76□□□□□ -2.13
ITGA6P23229 MIR320A-201ENST00000385302 82 ntBASIC1.76□□□□□ -2.13
ITGA6P23229 SNORD41.1-201ENST00000391000 69 ntBASIC1.76□□□□□ -2.13
ITGA6P23229 MIR4460-201ENST00000577862 86 ntBASIC1.76□□□□□ -2.13
ITGA6P23229 RMST_2.1-201ENST00000617263 136 ntBASIC1.76□□□□□ -2.13
ITGA6P23229 RNU6-1162P-201ENST00000384443 104 ntBASIC1.75□□□□□ -2.13
ITGA6P23229 MIR644A-201ENST00000385262 94 ntBASIC1.75□□□□□ -2.13
ITGA6P23229 MIR1827-201ENST00000408549 66 ntBASIC1.75□□□□□ -2.13
ITGA6P23229 RNA5SP247-201ENST00000411181 105 ntBASIC1.75□□□□□ -2.13
ITGA6P23229 SNORD79.1-201ENST00000516069 84 ntBASIC1.75□□□□□ -2.13
ITGA6P23229 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.75□□□□□ -2.13
ITGA6P23229 MIR521-2-201ENST00000384818 87 ntBASIC1.74□□□□□ -2.13
ITGA6P23229 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
ITGA6P23229 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.73□□□□□ -2.13
ITGA6P23229 RNU4-88P-201ENST00000411220 86 ntBASIC1.73□□□□□ -2.13
ITGA6P23229 AC002350.1-201ENST00000490759 375 ntBASIC1.73□□□□□ -2.13
ITGA6P23229 RNU6-135P-201ENST00000516769 101 ntBASIC1.73□□□□□ -2.13
ITGA6P23229 RNU6-902P-201ENST00000517212 91 ntBASIC1.73□□□□□ -2.13
ITGA6P23229 MIR4639-201ENST00000584938 69 ntBASIC1.73□□□□□ -2.13
ITGA6P23229 MIR8070-201ENST00000616510 88 ntBASIC1.73□□□□□ -2.13
ITGA6P23229 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.73□□□□□ -2.13
ITGA6P23229 AC244669.1-204ENST00000621564 178 ntBASIC1.73□□□□□ -2.13
ITGA6P23229 RNU6-392P-201ENST00000364926 101 ntBASIC1.72□□□□□ -2.13
ITGA6P23229 SNORD113-2-201ENST00000391082 72 ntBASIC1.72□□□□□ -2.13
ITGA6P23229 MIR548L-201ENST00000408303 86 ntBASIC1.72□□□□□ -2.13
ITGA6P23229 snoU13.13-201ENST00000458842 104 ntBASIC1.72□□□□□ -2.13
ITGA6P23229 SNORD114-4-201ENST00000363962 75 ntBASIC1.71□□□□□ -2.14
ITGA6P23229 SNORD28-201ENST00000384706 75 ntBASIC1.71□□□□□ -2.14
ITGA6P23229 AL353770.2-201ENST00000620024 78 ntBASIC1.71□□□□□ -2.14
ITGA6P23229 RNU6-698P-201ENST00000363523 107 ntBASIC1.7□□□□□ -2.14
ITGA6P23229 RNU1-141P-201ENST00000364623 158 ntBASIC1.7□□□□□ -2.14
ITGA6P23229 RNU6-34P-201ENST00000364874 107 ntBASIC1.7□□□□□ -2.14
ITGA6P23229 MIR517B-201ENST00000385102 67 ntBASIC1.7□□□□□ -2.14
ITGA6P23229 Y_RNA.226-201ENST00000364337 114 ntBASIC1.69□□□□□ -2.14
ITGA6P23229 Y_RNA.379-201ENST00000365653 102 ntBASIC1.69□□□□□ -2.14
ITGA6P23229 RNU7-174P-201ENST00000516248 59 ntBASIC1.69□□□□□ -2.14
ITGA6P23229 RNU5B-6P-201ENST00000516765 68 ntBASIC1.69□□□□□ -2.14
ITGA6P23229 U2.7-201ENST00000619197 100 ntBASIC1.69□□□□□ -2.14
ITGA6P23229 RNU6-726P-201ENST00000364680 107 ntBASIC1.68□□□□□ -2.14
ITGA6P23229 RNU6-520P-201ENST00000384717 104 ntBASIC1.68□□□□□ -2.14
ITGA6P23229 RNU6-469P-201ENST00000516253 101 ntBASIC1.68□□□□□ -2.14
ITGA6P23229 MIR548AD-201ENST00000584780 82 ntBASIC1.68□□□□□ -2.14
ITGA6P23229 U4.4-201ENST00000620626 117 ntBASIC1.68□□□□□ -2.14
ITGA6P23229 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.67□□□□□ -2.14
ITGA6P23229 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
ITGA6P23229 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ITGA6P23229 AC021146.9-201ENST00000512503 156 ntBASIC1.66□□□□□ -2.14
ITGA6P23229 RNU6-716P-201ENST00000365621 103 ntBASIC1.65□□□□□ -2.15
ITGA6P23229 RNA5SP61-201ENST00000516453 100 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 325.5 ms