Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MIR5588-201ENST00000581890 63 ntBASIC0.67□□□□□ -2.3
XPAP23025 SNORA26.2-201ENST00000390922 122 ntBASIC0.66□□□□□ -2.3
XPAP23025 AC093423.1-201ENST00000440817 142 ntBASIC0.66□□□□□ -2.3
XPAP23025 RNA5SP484-201ENST00000458857 111 ntBASIC0.66□□□□□ -2.3
XPAP23025 RNU6-1057P-201ENST00000517162 102 ntBASIC0.66□□□□□ -2.3
XPAP23025 RNU6-820P-201ENST00000384273 107 ntBASIC0.65□□□□□ -2.31
XPAP23025 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.65□□□□□ -2.31
XPAP23025 AC022709.1-201ENST00000615967 87 ntBASIC0.65□□□□□ -2.31
XPAP23025 MIR6515-201ENST00000619843 57 ntBASIC0.65□□□□□ -2.31
XPAP23025 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.65□□□□□ -2.31
XPAP23025 SNORD115-37-201ENST00000363768 82 ntBASIC0.64□□□□□ -2.31
XPAP23025 AC140658.3-201ENST00000567603 271 ntBASIC0.64□□□□□ -2.31
XPAP23025 RNU1-29P-201ENST00000606574 126 ntBASIC0.64□□□□□ -2.31
XPAP23025 SNORA70.25-201ENST00000612741 95 ntBASIC0.64□□□□□ -2.31
XPAP23025 RNU1-141P-201ENST00000364623 158 ntBASIC0.63□□□□□ -2.31
XPAP23025 SNORD71-201ENST00000411292 86 ntBASIC0.63□□□□□ -2.31
XPAP23025 RNU7-74P-201ENST00000459104 62 ntBASIC0.63□□□□□ -2.31
XPAP23025 NAMPTP3-201ENST00000569273 224 ntBASIC0.63□□□□□ -2.31
XPAP23025 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.63□□□□□ -2.31
XPAP23025 SNORA63.2-201ENST00000362603 126 ntBASIC0.62□□□□□ -2.31
XPAP23025 RNA5SP173-201ENST00000364857 136 ntBASIC0.62□□□□□ -2.31
XPAP23025 RNU6-573P-201ENST00000383938 106 ntBASIC0.62□□□□□ -2.31
XPAP23025 RNU6-1152P-201ENST00000384576 107 ntBASIC0.62□□□□□ -2.31
XPAP23025 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
XPAP23025 snoU13.17-201ENST00000458802 104 ntBASIC0.62□□□□□ -2.31
XPAP23025 SNORA68.3-201ENST00000515906 83 ntBASIC0.62□□□□□ -2.31
XPAP23025 MIR1302-4-201ENST00000408701 150 ntBASIC0.61□□□□□ -2.31
XPAP23025 MIR6755-201ENST00000619993 66 ntBASIC0.61□□□□□ -2.31
XPAP23025 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
XPAP23025 RNU6-1276P-201ENST00000365372 104 ntBASIC0.6□□□□□ -2.31
XPAP23025 Y_RNA.426-201ENST00000384068 113 ntBASIC0.6□□□□□ -2.31
XPAP23025 SNORA24B-201ENST00000384176 131 ntBASIC0.6□□□□□ -2.31
XPAP23025 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.6□□□□□ -2.31
XPAP23025 RNU7-171P-201ENST00000459581 62 ntBASIC0.6□□□□□ -2.31
XPAP23025 Y_RNA.423-201ENST00000384057 113 ntBASIC0.59□□□□□ -2.31
XPAP23025 AL450471.1-201ENST00000447509 127 ntBASIC0.59□□□□□ -2.31
XPAP23025 SNORD44.1-201ENST00000363202 61 ntBASIC0.58□□□□□ -2.32
XPAP23025 RNU6-624P-201ENST00000363411 107 ntBASIC0.58□□□□□ -2.32
XPAP23025 RNU6-242P-201ENST00000384359 107 ntBASIC0.58□□□□□ -2.32
XPAP23025 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
XPAP23025 RNU2-59P-201ENST00000410482 191 ntBASIC0.58□□□□□ -2.32
XPAP23025 Y_RNA.607-201ENST00000410597 98 ntBASIC0.58□□□□□ -2.32
XPAP23025 RNU6-1232P-201ENST00000516299 86 ntBASIC0.58□□□□□ -2.32
XPAP23025 MIR4460-201ENST00000577862 86 ntBASIC0.58□□□□□ -2.32
XPAP23025 MIR548O2-201ENST00000616090 70 ntBASIC0.58□□□□□ -2.32
XPAP23025 MIR103A1-201ENST00000362165 78 ntBASIC0.57□□□□□ -2.32
XPAP23025 RNU6-787P-201ENST00000384032 107 ntBASIC0.57□□□□□ -2.32
XPAP23025 MT-TY-201ENST00000387409 66 ntBASIC0.57□□□□□ -2.32
XPAP23025 U3.27-201ENST00000391237 200 ntBASIC0.57□□□□□ -2.32
XPAP23025 RNU5B-6P-201ENST00000516765 68 ntBASIC0.57□□□□□ -2.32
XPAP23025 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
XPAP23025 AC073869.9-201ENST00000641610 120 ntBASIC0.57□□□□□ -2.32
XPAP23025 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
XPAP23025 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
XPAP23025 RNU6V-201ENST00000384105 107 ntBASIC0.56□□□□□ -2.32
XPAP23025 MIR598-201ENST00000384868 97 ntBASIC0.56□□□□□ -2.32
XPAP23025 SNORD110-201ENST00000408189 75 ntBASIC0.56□□□□□ -2.32
XPAP23025 AC006210.1-201ENST00000424882 111 ntBASIC0.56□□□□□ -2.32
XPAP23025 RNU6-1108P-201ENST00000516308 104 ntBASIC0.56□□□□□ -2.32
XPAP23025 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
XPAP23025 RNU6-161P-201ENST00000363051 106 ntBASIC0.55□□□□□ -2.32
XPAP23025 RNY4P3-201ENST00000365254 95 ntBASIC0.55□□□□□ -2.32
XPAP23025 RNU6-54P-201ENST00000365563 107 ntBASIC0.55□□□□□ -2.32
XPAP23025 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.55□□□□□ -2.32
XPAP23025 MIR5087-201ENST00000635826 76 ntBASIC0.55□□□□□ -2.32
XPAP23025 RNU5F-1-201ENST00000362507 117 ntBASIC0.54□□□□□ -2.32
XPAP23025 RNU6-478P-201ENST00000363904 110 ntBASIC0.54□□□□□ -2.32
XPAP23025 Y_RNA.258-201ENST00000364613 105 ntBASIC0.54□□□□□ -2.32
XPAP23025 Y_RNA.437-201ENST00000384113 113 ntBASIC0.54□□□□□ -2.32
XPAP23025 MIR489-201ENST00000384923 84 ntBASIC0.54□□□□□ -2.32
XPAP23025 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
XPAP23025 RNA5SP436-201ENST00000516020 115 ntBASIC0.54□□□□□ -2.32
XPAP23025 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
XPAP23025 YWHAEP2-201ENST00000580066 112 ntBASIC0.54□□□□□ -2.32
XPAP23025 MIRLET7D-201ENST00000362263 87 ntBASIC0.53□□□□□ -2.32
XPAP23025 Y_RNA.316-201ENST00000365118 111 ntBASIC0.53□□□□□ -2.32
XPAP23025 RNU6-652P-201ENST00000365488 107 ntBASIC0.53□□□□□ -2.32
XPAP23025 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
XPAP23025 AC069503.3-201ENST00000618674 145 ntBASIC0.53□□□□□ -2.32
XPAP23025 RNU6-208P-201ENST00000362431 107 ntBASIC0.52□□□□□ -2.33
XPAP23025 RNU6-824P-201ENST00000363724 104 ntBASIC0.52□□□□□ -2.33
XPAP23025 Y_RNA.313-201ENST00000365095 103 ntBASIC0.52□□□□□ -2.33
XPAP23025 SNORA2A-201ENST00000383885 135 ntBASIC0.52□□□□□ -2.33
XPAP23025 MIR216B-201ENST00000390186 82 ntBASIC0.52□□□□□ -2.33
XPAP23025 RNU6-1177P-201ENST00000391058 104 ntBASIC0.52□□□□□ -2.33
XPAP23025 HMGN2P22-201ENST00000427588 175 ntBASIC0.52□□□□□ -2.33
XPAP23025 MIR4666B-201ENST00000578142 81 ntBASIC0.52□□□□□ -2.33
XPAP23025 MIR4473-201ENST00000583731 91 ntBASIC0.52□□□□□ -2.33
XPAP23025 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
XPAP23025 SNORD77.2-201ENST00000391045 68 ntBASIC0.51□□□□□ -2.33
XPAP23025 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
XPAP23025 SNORD42B-201ENST00000458893 67 ntBASIC0.51□□□□□ -2.33
XPAP23025 MIR548AE1-201ENST00000583292 70 ntBASIC0.5□□□□□ -2.33
XPAP23025 MIR1245B-201ENST00000636115 69 ntBASIC0.5□□□□□ -2.33
XPAP23025 MIR760-201ENST00000390220 80 ntBASIC0.49□□□□□ -2.33
XPAP23025 RNU6-129P-201ENST00000391022 107 ntBASIC0.49□□□□□ -2.33
XPAP23025 MIR936-201ENST00000401264 98 ntBASIC0.49□□□□□ -2.33
XPAP23025 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.49□□□□□ -2.33
XPAP23025 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
XPAP23025 MIR5706-201ENST00000579841 80 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms