Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.8□□□□□ -2.12
CSB-PGBD3P0DP91 RNU6-982P-201ENST00000516216 102 ntBASIC1.8□□□□□ -2.12
CSB-PGBD3P0DP91 RNU6-752P-201ENST00000516376 102 ntBASIC1.8□□□□□ -2.12
CSB-PGBD3P0DP91 MIR520F-201ENST00000384824 87 ntBASIC1.79□□□□□ -2.12
CSB-PGBD3P0DP91 NAMPTP3-201ENST00000569273 224 ntBASIC1.79□□□□□ -2.12
CSB-PGBD3P0DP91 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CSB-PGBD3P0DP91 MIR1-1-201ENST00000362147 71 ntBASIC1.78□□□□□ -2.12
CSB-PGBD3P0DP91 MIR26B-201ENST00000362251 77 ntBASIC1.78□□□□□ -2.12
CSB-PGBD3P0DP91 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.78□□□□□ -2.12
CSB-PGBD3P0DP91 SNORD75.2-201ENST00000408784 58 ntBASIC1.78□□□□□ -2.12
CSB-PGBD3P0DP91 AL691482.2-201ENST00000457453 84 ntBASIC1.78□□□□□ -2.12
CSB-PGBD3P0DP91 SNORD114-27-201ENST00000363766 70 ntBASIC1.77□□□□□ -2.13
CSB-PGBD3P0DP91 MTND4LP19-201ENST00000403051 166 ntBASIC1.77□□□□□ -2.13
CSB-PGBD3P0DP91 RNU7-104P-201ENST00000459398 79 ntBASIC1.77□□□□□ -2.13
CSB-PGBD3P0DP91 MIR4511-201ENST00000582784 87 ntBASIC1.77□□□□□ -2.13
CSB-PGBD3P0DP91 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CSB-PGBD3P0DP91 RNU6-495P-201ENST00000362995 107 ntBASIC1.76□□□□□ -2.13
CSB-PGBD3P0DP91 MIR320A-201ENST00000385302 82 ntBASIC1.76□□□□□ -2.13
CSB-PGBD3P0DP91 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.76□□□□□ -2.13
CSB-PGBD3P0DP91 SNORA25.8-201ENST00000364831 128 ntBASIC1.75□□□□□ -2.13
CSB-PGBD3P0DP91 MIR19B1-201ENST00000384829 87 ntBASIC1.75□□□□□ -2.13
CSB-PGBD3P0DP91 MIR203A-201ENST00000384836 110 ntBASIC1.75□□□□□ -2.13
CSB-PGBD3P0DP91 SNORA40.6-201ENST00000391153 128 ntBASIC1.75□□□□□ -2.13
CSB-PGBD3P0DP91 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
CSB-PGBD3P0DP91 RNU6-54P-201ENST00000365563 107 ntBASIC1.74□□□□□ -2.13
CSB-PGBD3P0DP91 RNU6-1039P-201ENST00000383931 107 ntBASIC1.74□□□□□ -2.13
CSB-PGBD3P0DP91 MIR7-2-201ENST00000384970 110 ntBASIC1.74□□□□□ -2.13
CSB-PGBD3P0DP91 MIR617-201ENST00000385030 97 ntBASIC1.74□□□□□ -2.13
CSB-PGBD3P0DP91 MIR519E-201ENST00000385075 84 ntBASIC1.74□□□□□ -2.13
CSB-PGBD3P0DP91 MIR1827-201ENST00000408549 66 ntBASIC1.74□□□□□ -2.13
CSB-PGBD3P0DP91 RNU7-24P-201ENST00000458867 62 ntBASIC1.74□□□□□ -2.13
CSB-PGBD3P0DP91 MIR3660-201ENST00000584845 100 ntBASIC1.74□□□□□ -2.13
CSB-PGBD3P0DP91 AL136317.1-201ENST00000612653 226 ntBASIC1.74□□□□□ -2.13
CSB-PGBD3P0DP91 Y_RNA.174-201ENST00000363781 105 ntBASIC1.73□□□□□ -2.13
CSB-PGBD3P0DP91 MIR548O2-201ENST00000616090 70 ntBASIC1.73□□□□□ -2.13
CSB-PGBD3P0DP91 AC103706.3-201ENST00000636297 85 ntBASIC1.73□□□□□ -2.13
CSB-PGBD3P0DP91 RNU6-1187P-201ENST00000364771 110 ntBASIC1.72□□□□□ -2.13
CSB-PGBD3P0DP91 RNU6-499P-201ENST00000365615 107 ntBASIC1.72□□□□□ -2.13
CSB-PGBD3P0DP91 MIR6509-201ENST00000614603 85 ntBASIC1.72□□□□□ -2.13
CSB-PGBD3P0DP91 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.72□□□□□ -2.13
CSB-PGBD3P0DP91 RNU1-93P-201ENST00000364704 169 ntBASIC1.71□□□□□ -2.14
CSB-PGBD3P0DP91 MIR520E-201ENST00000384867 87 ntBASIC1.71□□□□□ -2.14
CSB-PGBD3P0DP91 MIR644A-201ENST00000385262 94 ntBASIC1.71□□□□□ -2.14
CSB-PGBD3P0DP91 FABP5P4-201ENST00000437203 171 ntBASIC1.71□□□□□ -2.14
CSB-PGBD3P0DP91 RPS29P1-201ENST00000465274 159 ntBASIC1.71□□□□□ -2.14
CSB-PGBD3P0DP91 RNA5SP404-201ENST00000517118 132 ntBASIC1.71□□□□□ -2.14
CSB-PGBD3P0DP91 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSB-PGBD3P0DP91 AC110620.1-201ENST00000416042 228 ntBASIC1.7□□□□□ -2.14
CSB-PGBD3P0DP91 SNORD42B-201ENST00000458893 67 ntBASIC1.7□□□□□ -2.14
CSB-PGBD3P0DP91 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
CSB-PGBD3P0DP91 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CSB-PGBD3P0DP91 RNU6-987P-201ENST00000384759 104 ntBASIC1.69□□□□□ -2.14
CSB-PGBD3P0DP91 MIR200A-201ENST00000384875 90 ntBASIC1.69□□□□□ -2.14
CSB-PGBD3P0DP91 SNORD124-201ENST00000459577 104 ntBASIC1.69□□□□□ -2.14
CSB-PGBD3P0DP91 SNORD89-201ENST00000390981 114 ntBASIC1.68□□□□□ -2.14
CSB-PGBD3P0DP91 RNU4-37P-201ENST00000410214 84 ntBASIC1.68□□□□□ -2.14
CSB-PGBD3P0DP91 AC002350.1-201ENST00000490759 375 ntBASIC1.68□□□□□ -2.14
CSB-PGBD3P0DP91 AC022709.1-201ENST00000615967 87 ntBASIC1.68□□□□□ -2.14
CSB-PGBD3P0DP91 AC067863.3-201ENST00000624172 122 ntBASIC1.68□□□□□ -2.14
CSB-PGBD3P0DP91 RNU1-124P-201ENST00000363861 145 ntBASIC1.67□□□□□ -2.14
CSB-PGBD3P0DP91 RNU6V-201ENST00000384105 107 ntBASIC1.67□□□□□ -2.14
CSB-PGBD3P0DP91 Y_RNA.540-201ENST00000384638 111 ntBASIC1.67□□□□□ -2.14
CSB-PGBD3P0DP91 MIR216B-201ENST00000390186 82 ntBASIC1.67□□□□□ -2.14
CSB-PGBD3P0DP91 RNU6-955P-201ENST00000410497 104 ntBASIC1.67□□□□□ -2.14
CSB-PGBD3P0DP91 RNA5SP480-201ENST00000516840 109 ntBASIC1.67□□□□□ -2.14
CSB-PGBD3P0DP91 MIR6515-201ENST00000619843 57 ntBASIC1.67□□□□□ -2.14
CSB-PGBD3P0DP91 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
CSB-PGBD3P0DP91 RNU6-1110P-201ENST00000516462 101 ntBASIC1.66□□□□□ -2.14
CSB-PGBD3P0DP91 MIR3657-201ENST00000584818 117 ntBASIC1.66□□□□□ -2.14
CSB-PGBD3P0DP91 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CSB-PGBD3P0DP91 MIR633-201ENST00000384821 98 ntBASIC1.65□□□□□ -2.15
CSB-PGBD3P0DP91 U7.7-201ENST00000459276 60 ntBASIC1.65□□□□□ -2.15
CSB-PGBD3P0DP91 SNORA40.17-201ENST00000517256 115 ntBASIC1.65□□□□□ -2.15
CSB-PGBD3P0DP91 AC069503.3-201ENST00000618674 145 ntBASIC1.65□□□□□ -2.15
CSB-PGBD3P0DP91 AC244669.1-204ENST00000621564 178 ntBASIC1.65□□□□□ -2.15
CSB-PGBD3P0DP91 AC073869.9-201ENST00000641610 120 ntBASIC1.65□□□□□ -2.15
CSB-PGBD3P0DP91 RNU6-669P-201ENST00000365575 107 ntBASIC1.64□□□□□ -2.15
CSB-PGBD3P0DP91 MIR618-201ENST00000385287 98 ntBASIC1.64□□□□□ -2.15
CSB-PGBD3P0DP91 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CSB-PGBD3P0DP91 RNU6-668P-201ENST00000364180 107 ntBASIC1.63□□□□□ -2.15
CSB-PGBD3P0DP91 SNORD114-24-201ENST00000365029 72 ntBASIC1.63□□□□□ -2.15
CSB-PGBD3P0DP91 RNU6-990P-201ENST00000364385 104 ntBASIC1.62□□□□□ -2.15
CSB-PGBD3P0DP91 RNA5SP117-201ENST00000365294 118 ntBASIC1.62□□□□□ -2.15
CSB-PGBD3P0DP91 SNORD28-201ENST00000384706 75 ntBASIC1.62□□□□□ -2.15
CSB-PGBD3P0DP91 SNORD41.1-201ENST00000391000 69 ntBASIC1.62□□□□□ -2.15
CSB-PGBD3P0DP91 MTND4LP1-201ENST00000446263 157 ntBASIC1.62□□□□□ -2.15
CSB-PGBD3P0DP91 RNU6-645P-201ENST00000364649 106 ntBASIC1.61□□□□□ -2.15
CSB-PGBD3P0DP91 RNU6-260P-201ENST00000384092 107 ntBASIC1.61□□□□□ -2.15
CSB-PGBD3P0DP91 MIR4639-201ENST00000584938 69 ntBASIC1.61□□□□□ -2.15
CSB-PGBD3P0DP91 MIR6767-201ENST00000637302 66 ntBASIC1.61□□□□□ -2.15
CSB-PGBD3P0DP91 Y_RNA.375-201ENST00000365625 101 ntBASIC1.6□□□□□ -2.15
CSB-PGBD3P0DP91 SNORD105-201ENST00000386910 85 ntBASIC1.6□□□□□ -2.15
CSB-PGBD3P0DP91 MIR758-201ENST00000390227 88 ntBASIC1.6□□□□□ -2.15
CSB-PGBD3P0DP91 MIR151B-201ENST00000584249 96 ntBASIC1.6□□□□□ -2.15
CSB-PGBD3P0DP91 MIR4295-201ENST00000585286 85 ntBASIC1.6□□□□□ -2.15
CSB-PGBD3P0DP91 RNA5SP147-201ENST00000516493 109 ntBASIC1.59□□□□□ -2.15
CSB-PGBD3P0DP91 RNU6-1223P-201ENST00000517124 104 ntBASIC1.59□□□□□ -2.15
CSB-PGBD3P0DP91 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.59□□□□□ -2.15
CSB-PGBD3P0DP91 MIR6788-201ENST00000618842 66 ntBASIC1.59□□□□□ -2.15
CSB-PGBD3P0DP91 AC092634.7-201ENST00000621022 103 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 414.1 ms