Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MT-TY-201ENST00000387409 66 ntBASIC1.64□□□□□ -2.15
THBS1P07996 SNORA7.1-201ENST00000363750 139 ntBASIC1.63□□□□□ -2.15
THBS1P07996 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
THBS1P07996 SNORA17.3-201ENST00000391159 129 ntBASIC1.63□□□□□ -2.15
THBS1P07996 MIR4498-201ENST00000577599 66 ntBASIC1.63□□□□□ -2.15
THBS1P07996 MIR4460-201ENST00000577862 86 ntBASIC1.63□□□□□ -2.15
THBS1P07996 MIR466-201ENST00000580653 84 ntBASIC1.63□□□□□ -2.15
THBS1P07996 MIR6739-201ENST00000622461 75 ntBASIC1.63□□□□□ -2.15
THBS1P07996 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
THBS1P07996 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
THBS1P07996 SNORD28-201ENST00000384706 75 ntBASIC1.62□□□□□ -2.15
THBS1P07996 MIR222-201ENST00000384992 110 ntBASIC1.62□□□□□ -2.15
THBS1P07996 RNU6-1110P-201ENST00000516462 101 ntBASIC1.62□□□□□ -2.15
THBS1P07996 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.62□□□□□ -2.15
THBS1P07996 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
THBS1P07996 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
THBS1P07996 RNA5SP192-201ENST00000364404 120 ntBASIC1.61□□□□□ -2.15
THBS1P07996 RNA5SP299-201ENST00000391203 116 ntBASIC1.61□□□□□ -2.15
THBS1P07996 FABP5P4-201ENST00000437203 171 ntBASIC1.61□□□□□ -2.15
THBS1P07996 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
THBS1P07996 AC018659.1-201ENST00000551083 169 ntBASIC1.61□□□□□ -2.15
THBS1P07996 AC244669.1-204ENST00000621564 178 ntBASIC1.61□□□□□ -2.15
THBS1P07996 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
THBS1P07996 RNU6-1162P-201ENST00000384443 104 ntBASIC1.6□□□□□ -2.15
THBS1P07996 SNORD42B-201ENST00000458893 67 ntBASIC1.6□□□□□ -2.15
THBS1P07996 RNU6-829P-201ENST00000363700 112 ntBASIC1.59□□□□□ -2.15
THBS1P07996 AC108667.1-201ENST00000428618 249 ntBASIC1.59□□□□□ -2.15
THBS1P07996 RNU6-1089P-201ENST00000516473 104 ntBASIC1.59□□□□□ -2.15
THBS1P07996 RNU6-1079P-201ENST00000362861 110 ntBASIC1.58□□□□□ -2.16
THBS1P07996 Y_RNA.236-201ENST00000364427 111 ntBASIC1.58□□□□□ -2.16
THBS1P07996 MIR644A-201ENST00000385262 94 ntBASIC1.58□□□□□ -2.16
THBS1P07996 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.58□□□□□ -2.16
THBS1P07996 Y_RNA.355-201ENST00000365462 98 ntBASIC1.57□□□□□ -2.16
THBS1P07996 AC002429.1-201ENST00000437672 148 ntBASIC1.57□□□□□ -2.16
THBS1P07996 U7.7-201ENST00000459276 60 ntBASIC1.57□□□□□ -2.16
THBS1P07996 RNU6-656P-201ENST00000516785 107 ntBASIC1.57□□□□□ -2.16
THBS1P07996 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
THBS1P07996 SNORD105-201ENST00000386910 85 ntBASIC1.56□□□□□ -2.16
THBS1P07996 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
THBS1P07996 RNU6-122P-201ENST00000516818 107 ntBASIC1.56□□□□□ -2.16
THBS1P07996 RNU6-92P-201ENST00000605893 104 ntBASIC1.56□□□□□ -2.16
THBS1P07996 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.56□□□□□ -2.16
THBS1P07996 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
THBS1P07996 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
THBS1P07996 RNU1-141P-201ENST00000364623 158 ntBASIC1.55□□□□□ -2.16
THBS1P07996 RNU6-726P-201ENST00000364680 107 ntBASIC1.55□□□□□ -2.16
THBS1P07996 RNA5SP190-201ENST00000365222 118 ntBASIC1.55□□□□□ -2.16
THBS1P07996 SNORA8.2-201ENST00000384372 139 ntBASIC1.55□□□□□ -2.16
THBS1P07996 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
THBS1P07996 RNA5SP47-201ENST00000517230 109 ntBASIC1.55□□□□□ -2.16
THBS1P07996 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
THBS1P07996 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
THBS1P07996 RNA5SP147-201ENST00000516493 109 ntBASIC1.54□□□□□ -2.16
THBS1P07996 snoU13.31-201ENST00000607291 104 ntBASIC1.54□□□□□ -2.16
THBS1P07996 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
THBS1P07996 SNORA25-201ENST00000384384 134 ntBASIC1.53□□□□□ -2.16
THBS1P07996 MIR521-2-201ENST00000384818 87 ntBASIC1.53□□□□□ -2.16
THBS1P07996 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
THBS1P07996 MIR3938-201ENST00000582157 103 ntBASIC1.53□□□□□ -2.16
THBS1P07996 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.17
THBS1P07996 SNORD18A-201ENST00000363753 72 ntBASIC1.52□□□□□ -2.17
THBS1P07996 RNU6-990P-201ENST00000364385 104 ntBASIC1.52□□□□□ -2.17
THBS1P07996 MIR499A-201ENST00000384903 122 ntBASIC1.52□□□□□ -2.17
THBS1P07996 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.52□□□□□ -2.17
THBS1P07996 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
THBS1P07996 SNORD89-201ENST00000390981 114 ntBASIC1.52□□□□□ -2.17
THBS1P07996 RNU6-808P-201ENST00000391233 108 ntBASIC1.52□□□□□ -2.17
THBS1P07996 SNORA15B-2-201ENST00000384058 135 ntBASIC1.51□□□□□ -2.17
THBS1P07996 SNORA15B-1-201ENST00000384334 135 ntBASIC1.51□□□□□ -2.17
THBS1P07996 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
THBS1P07996 RNU1-92P-201ENST00000517017 135 ntBASIC1.51□□□□□ -2.17
THBS1P07996 SCARNA16.5-201ENST00000517114 183 ntBASIC1.51□□□□□ -2.17
THBS1P07996 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
THBS1P07996 uc_338.10-201ENST00000621872 182 ntBASIC1.51□□□□□ -2.17
THBS1P07996 MIR200A-201ENST00000384875 90 ntBASIC1.5□□□□□ -2.17
THBS1P07996 MIR489-201ENST00000384923 84 ntBASIC1.5□□□□□ -2.17
THBS1P07996 SNORD113-2-201ENST00000391082 72 ntBASIC1.5□□□□□ -2.17
THBS1P07996 AP1B1P2-201ENST00000416196 106 ntBASIC1.5□□□□□ -2.17
THBS1P07996 Y_RNA.722-201ENST00000517279 114 ntBASIC1.5□□□□□ -2.17
THBS1P07996 AC025627.3-201ENST00000582078 182 ntBASIC1.5□□□□□ -2.17
THBS1P07996 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
THBS1P07996 MIR378A-201ENST00000362177 66 ntBASIC1.49□□□□□ -2.17
THBS1P07996 RNU6-716P-201ENST00000365621 103 ntBASIC1.49□□□□□ -2.17
THBS1P07996 SNORA40.17-201ENST00000517256 115 ntBASIC1.49□□□□□ -2.17
THBS1P07996 MIR3678-201ENST00000578455 94 ntBASIC1.49□□□□□ -2.17
THBS1P07996 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
THBS1P07996 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
THBS1P07996 MIR573-201ENST00000384964 99 ntBASIC1.48□□□□□ -2.17
THBS1P07996 RNU4-62P-201ENST00000410125 130 ntBASIC1.48□□□□□ -2.17
THBS1P07996 RNU6-321P-201ENST00000410912 106 ntBASIC1.48□□□□□ -2.17
THBS1P07996 snoU13.18-201ENST00000459483 104 ntBASIC1.48□□□□□ -2.17
THBS1P07996 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
THBS1P07996 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.47□□□□□ -2.17
THBS1P07996 MIR548C-201ENST00000384815 97 ntBASIC1.47□□□□□ -2.17
THBS1P07996 MIR19B1-201ENST00000384829 87 ntBASIC1.47□□□□□ -2.17
THBS1P07996 RNU6-269P-201ENST00000391077 97 ntBASIC1.47□□□□□ -2.17
THBS1P07996 AL157398.1-201ENST00000452981 186 ntBASIC1.47□□□□□ -2.17
THBS1P07996 MIR4303-201ENST00000581299 66 ntBASIC1.47□□□□□ -2.17
THBS1P07996 MIR548V-201ENST00000584165 80 ntBASIC1.47□□□□□ -2.17
THBS1P07996 MIR8070-201ENST00000616510 88 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 311.2 ms