Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 U7.4-201ENST00000614961 63 ntBASIC1.02□□□□□ -2.25
ITGB1P05556 Y_RNA.12-201ENST00000362393 112 ntBASIC1.01□□□□□ -2.25
ITGB1P05556 Y_RNA.264-201ENST00000364665 102 ntBASIC1.01□□□□□ -2.25
ITGB1P05556 MIR4698-201ENST00000577795 80 ntBASIC1.01□□□□□ -2.25
ITGB1P05556 AC025627.3-201ENST00000582078 182 ntBASIC1.01□□□□□ -2.25
ITGB1P05556 RNY4P3-201ENST00000365254 95 ntBASIC1□□□□□ -2.25
ITGB1P05556 Y_RNA.371-201ENST00000365591 113 ntBASIC1□□□□□ -2.25
ITGB1P05556 Y_RNA.565-201ENST00000384719 101 ntBASIC1□□□□□ -2.25
ITGB1P05556 MIR573-201ENST00000384964 99 ntBASIC1□□□□□ -2.25
ITGB1P05556 RNU6-380P-201ENST00000410207 107 ntBASIC1□□□□□ -2.25
ITGB1P05556 MIR3134-201ENST00000579433 74 ntBASIC1□□□□□ -2.25
ITGB1P05556 MIR3920-201ENST00000581751 86 ntBASIC1□□□□□ -2.25
ITGB1P05556 FAS-AS1.1-201ENST00000615327 126 ntBASIC1□□□□□ -2.25
ITGB1P05556 SNORD115-44-201ENST00000365391 82 ntBASIC0.99□□□□□ -2.25
ITGB1P05556 RNU6-1126P-201ENST00000384002 107 ntBASIC0.99□□□□□ -2.25
ITGB1P05556 SNORA24B-201ENST00000384176 131 ntBASIC0.99□□□□□ -2.25
ITGB1P05556 MIR2113-201ENST00000459007 91 ntBASIC0.99□□□□□ -2.25
ITGB1P05556 RNU6-1057P-201ENST00000517162 102 ntBASIC0.99□□□□□ -2.25
ITGB1P05556 MIR3612-201ENST00000579753 87 ntBASIC0.99□□□□□ -2.25
ITGB1P05556 RN7SL793P-201ENST00000583259 296 ntBASIC0.99□□□□□ -2.25
ITGB1P05556 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
ITGB1P05556 SNORD28-201ENST00000384706 75 ntBASIC0.98□□□□□ -2.25
ITGB1P05556 RNU6-469P-201ENST00000516253 101 ntBASIC0.98□□□□□ -2.25
ITGB1P05556 RNU6-303P-201ENST00000517091 106 ntBASIC0.98□□□□□ -2.25
ITGB1P05556 YWHAEP2-201ENST00000580066 112 ntBASIC0.98□□□□□ -2.25
ITGB1P05556 YWHAEP3-201ENST00000582767 121 ntBASIC0.98□□□□□ -2.25
ITGB1P05556 AC244669.1-204ENST00000621564 178 ntBASIC0.98□□□□□ -2.25
ITGB1P05556 SNORD18A-201ENST00000363753 72 ntBASIC0.97□□□□□ -2.25
ITGB1P05556 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
ITGB1P05556 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ITGB1P05556 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
ITGB1P05556 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
ITGB1P05556 AC067863.3-201ENST00000624172 122 ntBASIC0.97□□□□□ -2.25
ITGB1P05556 MIR664A-201ENST00000626086 82 ntBASIC0.97□□□□□ -2.25
ITGB1P05556 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
ITGB1P05556 RNU6-824P-201ENST00000363724 104 ntBASIC0.96□□□□□ -2.26
ITGB1P05556 RNU6-340P-201ENST00000364005 107 ntBASIC0.96□□□□□ -2.26
ITGB1P05556 MIR216A-201ENST00000385063 110 ntBASIC0.96□□□□□ -2.26
ITGB1P05556 AC074348.1-201ENST00000426503 132 ntBASIC0.96□□□□□ -2.26
ITGB1P05556 RNU6-807P-201ENST00000516805 107 ntBASIC0.96□□□□□ -2.26
ITGB1P05556 MIR3678-201ENST00000578455 94 ntBASIC0.96□□□□□ -2.26
ITGB1P05556 MIR4639-201ENST00000584938 69 ntBASIC0.96□□□□□ -2.26
ITGB1P05556 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.96□□□□□ -2.26
ITGB1P05556 RNU6-330P-201ENST00000363015 107 ntBASIC0.95□□□□□ -2.26
ITGB1P05556 SNORD99-201ENST00000408612 74 ntBASIC0.95□□□□□ -2.26
ITGB1P05556 AC244098.3-201ENST00000424803 96 ntBASIC0.95□□□□□ -2.26
ITGB1P05556 RNU6-523P-201ENST00000516304 54 ntBASIC0.95□□□□□ -2.26
ITGB1P05556 AC011195.1-201ENST00000578177 177 ntBASIC0.95□□□□□ -2.26
ITGB1P05556 MIR4714-201ENST00000580728 77 ntBASIC0.95□□□□□ -2.26
ITGB1P05556 Y_RNA.258-201ENST00000364613 105 ntBASIC0.94□□□□□ -2.26
ITGB1P05556 MIR617-201ENST00000385030 97 ntBASIC0.94□□□□□ -2.26
ITGB1P05556 MIR519E-201ENST00000385075 84 ntBASIC0.94□□□□□ -2.26
ITGB1P05556 AC097510.1-201ENST00000510945 133 ntBASIC0.94□□□□□ -2.26
ITGB1P05556 RNU6-135P-201ENST00000516769 101 ntBASIC0.94□□□□□ -2.26
ITGB1P05556 MIR1297-201ENST00000637311 77 ntBASIC0.94□□□□□ -2.26
ITGB1P05556 RNU6-716P-201ENST00000365621 103 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 RNU6-154P-201ENST00000384306 106 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 Y_RNA.545-201ENST00000384652 105 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 RNU6-1177P-201ENST00000391058 104 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 U3.27-201ENST00000391237 200 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 MIR548L-201ENST00000408303 86 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 RNU6-70P-201ENST00000516438 60 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 RNA5SP47-201ENST00000517230 109 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 AL353765.1-201ENST00000605514 183 ntBASIC0.93□□□□□ -2.26
ITGB1P05556 RNU2-59P-201ENST00000410482 191 ntBASIC0.92□□□□□ -2.26
ITGB1P05556 Y_RNA.606-201ENST00000410579 103 ntBASIC0.92□□□□□ -2.26
ITGB1P05556 U6.81-201ENST00000612550 106 ntBASIC0.92□□□□□ -2.26
ITGB1P05556 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.92□□□□□ -2.26
ITGB1P05556 MIR18A-201ENST00000362310 71 ntBASIC0.91□□□□□ -2.26
ITGB1P05556 RNU6-726P-201ENST00000364680 107 ntBASIC0.91□□□□□ -2.26
ITGB1P05556 RNU6-382P-201ENST00000365181 106 ntBASIC0.91□□□□□ -2.26
ITGB1P05556 Y_RNA.374-201ENST00000365606 101 ntBASIC0.91□□□□□ -2.26
ITGB1P05556 RNU6-411P-201ENST00000384451 107 ntBASIC0.91□□□□□ -2.26
ITGB1P05556 AC073261.1-201ENST00000429409 121 ntBASIC0.91□□□□□ -2.26
ITGB1P05556 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
ITGB1P05556 MIR4773-1-201ENST00000637203 78 ntBASIC0.91□□□□□ -2.26
ITGB1P05556 SNORD41.1-201ENST00000391000 69 ntBASIC0.9□□□□□ -2.27
ITGB1P05556 Y_RNA.681-201ENST00000516445 113 ntBASIC0.9□□□□□ -2.27
ITGB1P05556 RNU6-1015P-201ENST00000517121 99 ntBASIC0.9□□□□□ -2.27
ITGB1P05556 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.9□□□□□ -2.27
ITGB1P05556 RNU4-45P-201ENST00000365469 141 ntBASIC0.89□□□□□ -2.27
ITGB1P05556 SNORA8.1-201ENST00000384250 140 ntBASIC0.89□□□□□ -2.27
ITGB1P05556 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
ITGB1P05556 RNU6-681P-201ENST00000364012 104 ntBASIC0.88□□□□□ -2.27
ITGB1P05556 RNU6-687P-201ENST00000516443 89 ntBASIC0.88□□□□□ -2.27
ITGB1P05556 SCARNA16.5-201ENST00000517114 183 ntBASIC0.88□□□□□ -2.27
ITGB1P05556 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
ITGB1P05556 MIR548O2-201ENST00000616090 70 ntBASIC0.88□□□□□ -2.27
ITGB1P05556 RNU6-54P-201ENST00000365563 107 ntBASIC0.87□□□□□ -2.27
ITGB1P05556 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
ITGB1P05556 RNU6-269P-201ENST00000391077 97 ntBASIC0.87□□□□□ -2.27
ITGB1P05556 RNA5SP222-201ENST00000411039 105 ntBASIC0.87□□□□□ -2.27
ITGB1P05556 NAMPTP3-201ENST00000569273 224 ntBASIC0.87□□□□□ -2.27
ITGB1P05556 MIR6513-201ENST00000621188 64 ntBASIC0.87□□□□□ -2.27
ITGB1P05556 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.87□□□□□ -2.27
ITGB1P05556 SNORA36.1-201ENST00000363424 132 ntBASIC0.86□□□□□ -2.27
ITGB1P05556 RNY1P8-201ENST00000383970 114 ntBASIC0.86□□□□□ -2.27
ITGB1P05556 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
ITGB1P05556 AC093423.1-201ENST00000440817 142 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 288.6 ms