Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 RNA5SP215-201ENST00000363440 122 ntBASIC1.44□□□□□ -2.18
KRT1P04264 RNU6-260P-201ENST00000384092 107 ntBASIC1.44□□□□□ -2.18
KRT1P04264 MIR203A-201ENST00000384836 110 ntBASIC1.44□□□□□ -2.18
KRT1P04264 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
KRT1P04264 RNU6-994P-201ENST00000410507 111 ntBASIC1.44□□□□□ -2.18
KRT1P04264 SCARNA21.1-201ENST00000515996 128 ntBASIC1.44□□□□□ -2.18
KRT1P04264 SNORA31.2-201ENST00000516019 134 ntBASIC1.44□□□□□ -2.18
KRT1P04264 SNORA31.14-201ENST00000516728 116 ntBASIC1.44□□□□□ -2.18
KRT1P04264 uc_338.16-201ENST00000621804 95 ntBASIC1.44□□□□□ -2.18
KRT1P04264 RNA5SP192-201ENST00000364404 120 ntBASIC1.43□□□□□ -2.18
KRT1P04264 RNU4-62P-201ENST00000410125 130 ntBASIC1.43□□□□□ -2.18
KRT1P04264 RNU7-74P-201ENST00000459104 62 ntBASIC1.43□□□□□ -2.18
KRT1P04264 RN7SKP88-201ENST00000516847 250 ntBASIC1.43□□□□□ -2.18
KRT1P04264 RNU7-161P-201ENST00000517289 62 ntBASIC1.43□□□□□ -2.18
KRT1P04264 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
KRT1P04264 MIR3657-201ENST00000584818 117 ntBASIC1.43□□□□□ -2.18
KRT1P04264 7SK.8-201ENST00000612110 250 ntBASIC1.43□□□□□ -2.18
KRT1P04264 7SK.11-201ENST00000615477 250 ntBASIC1.43□□□□□ -2.18
KRT1P04264 7SK.13-201ENST00000622040 250 ntBASIC1.43□□□□□ -2.18
KRT1P04264 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
KRT1P04264 MIR1-1-201ENST00000362147 71 ntBASIC1.42□□□□□ -2.18
KRT1P04264 Y_RNA.32-201ENST00000362589 110 ntBASIC1.42□□□□□ -2.18
KRT1P04264 MIR100-201ENST00000385259 80 ntBASIC1.42□□□□□ -2.18
KRT1P04264 SNORA67.5-201ENST00000391036 107 ntBASIC1.42□□□□□ -2.18
KRT1P04264 RNU7-21P-201ENST00000459430 62 ntBASIC1.42□□□□□ -2.18
KRT1P04264 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
KRT1P04264 AC067863.3-201ENST00000624172 122 ntBASIC1.42□□□□□ -2.18
KRT1P04264 RNU6-369P-201ENST00000362515 102 ntBASIC1.41□□□□□ -2.18
KRT1P04264 SNORA2.1-201ENST00000363089 137 ntBASIC1.41□□□□□ -2.18
KRT1P04264 SNORA80D-201ENST00000384488 135 ntBASIC1.41□□□□□ -2.18
KRT1P04264 RNU6-939P-201ENST00000384634 107 ntBASIC1.41□□□□□ -2.18
KRT1P04264 MIR519E-201ENST00000385075 84 ntBASIC1.41□□□□□ -2.18
KRT1P04264 RNU7-90P-201ENST00000459216 62 ntBASIC1.41□□□□□ -2.18
KRT1P04264 RNU7-104P-201ENST00000459398 79 ntBASIC1.41□□□□□ -2.18
KRT1P04264 RNA5SP480-201ENST00000516840 109 ntBASIC1.41□□□□□ -2.18
KRT1P04264 Y_RNA.722-201ENST00000517279 114 ntBASIC1.41□□□□□ -2.18
KRT1P04264 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
KRT1P04264 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
KRT1P04264 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
KRT1P04264 RNA5SP299-201ENST00000391203 116 ntBASIC1.4□□□□□ -2.19
KRT1P04264 MIR1276-201ENST00000408707 83 ntBASIC1.4□□□□□ -2.19
KRT1P04264 AL157834.3-201ENST00000615543 103 ntBASIC1.4□□□□□ -2.19
KRT1P04264 RNU6-302P-201ENST00000365249 107 ntBASIC1.39□□□□□ -2.19
KRT1P04264 Y_RNA.363-201ENST00000365529 113 ntBASIC1.39□□□□□ -2.19
KRT1P04264 RNU6-54P-201ENST00000365563 107 ntBASIC1.39□□□□□ -2.19
KRT1P04264 MIR520F-201ENST00000384824 87 ntBASIC1.39□□□□□ -2.19
KRT1P04264 RNU6-808P-201ENST00000391233 108 ntBASIC1.39□□□□□ -2.19
KRT1P04264 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
KRT1P04264 MIR6504-201ENST00000613520 61 ntBASIC1.39□□□□□ -2.19
KRT1P04264 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRT1P04264 RNU6V-201ENST00000384105 107 ntBASIC1.38□□□□□ -2.19
KRT1P04264 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
KRT1P04264 RNU6-135P-201ENST00000516769 101 ntBASIC1.38□□□□□ -2.19
KRT1P04264 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
KRT1P04264 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.38□□□□□ -2.19
KRT1P04264 RNA5SP325-201ENST00000363756 130 ntBASIC1.37□□□□□ -2.19
KRT1P04264 RNU6-1089P-201ENST00000516473 104 ntBASIC1.37□□□□□ -2.19
KRT1P04264 RNU6-122P-201ENST00000516818 107 ntBASIC1.37□□□□□ -2.19
KRT1P04264 MIR3938-201ENST00000582157 103 ntBASIC1.37□□□□□ -2.19
KRT1P04264 RNU6-92P-201ENST00000605893 104 ntBASIC1.37□□□□□ -2.19
KRT1P04264 MIR6739-201ENST00000622461 75 ntBASIC1.37□□□□□ -2.19
KRT1P04264 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRT1P04264 RNU6-42P-201ENST00000384165 107 ntBASIC1.36□□□□□ -2.19
KRT1P04264 MIR618-201ENST00000385287 98 ntBASIC1.36□□□□□ -2.19
KRT1P04264 RNU6-910P-201ENST00000390844 107 ntBASIC1.36□□□□□ -2.19
KRT1P04264 SNORD42B-201ENST00000458893 67 ntBASIC1.36□□□□□ -2.19
KRT1P04264 RNU6-656P-201ENST00000516785 107 ntBASIC1.36□□□□□ -2.19
KRT1P04264 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRT1P04264 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRT1P04264 Y_RNA.250-201ENST00000364542 110 ntBASIC1.35□□□□□ -2.19
KRT1P04264 RNA5SP117-201ENST00000365294 118 ntBASIC1.35□□□□□ -2.19
KRT1P04264 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
KRT1P04264 RNU6-446P-201ENST00000362827 106 ntBASIC1.34□□□□□ -2.19
KRT1P04264 SNORD114-4-201ENST00000363962 75 ntBASIC1.34□□□□□ -2.19
KRT1P04264 MIR1827-201ENST00000408549 66 ntBASIC1.34□□□□□ -2.19
KRT1P04264 AL136317.1-201ENST00000612653 226 ntBASIC1.34□□□□□ -2.19
KRT1P04264 RMST_2.1-201ENST00000617263 136 ntBASIC1.34□□□□□ -2.19
KRT1P04264 MIR7978-201ENST00000636158 59 ntBASIC1.34□□□□□ -2.19
KRT1P04264 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRT1P04264 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
KRT1P04264 RNU6-392P-201ENST00000364926 101 ntBASIC1.33□□□□□ -2.2
KRT1P04264 RNU6-1162P-201ENST00000384443 104 ntBASIC1.33□□□□□ -2.2
KRT1P04264 MT-TY-201ENST00000387409 66 ntBASIC1.33□□□□□ -2.2
KRT1P04264 SNORD41.1-201ENST00000391000 69 ntBASIC1.33□□□□□ -2.2
KRT1P04264 RNA5SP147-201ENST00000516493 109 ntBASIC1.33□□□□□ -2.2
KRT1P04264 AC018659.1-201ENST00000551083 169 ntBASIC1.33□□□□□ -2.2
KRT1P04264 MIR4460-201ENST00000577862 86 ntBASIC1.33□□□□□ -2.2
KRT1P04264 MIR4639-201ENST00000584938 69 ntBASIC1.33□□□□□ -2.2
KRT1P04264 SNORD114-26-201ENST00000363543 72 ntBASIC1.32□□□□□ -2.2
KRT1P04264 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
KRT1P04264 MIR548L-201ENST00000408303 86 ntBASIC1.32□□□□□ -2.2
KRT1P04264 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.32□□□□□ -2.2
KRT1P04264 RNU7-95P-201ENST00000459222 64 ntBASIC1.32□□□□□ -2.2
KRT1P04264 AC002350.1-201ENST00000490759 375 ntBASIC1.32□□□□□ -2.2
KRT1P04264 RNU6-469P-201ENST00000516253 101 ntBASIC1.32□□□□□ -2.2
KRT1P04264 MIR6779-201ENST00000617283 64 ntBASIC1.32□□□□□ -2.2
KRT1P04264 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
KRT1P04264 Y_RNA.178-201ENST00000363832 102 ntBASIC1.31□□□□□ -2.2
KRT1P04264 Y_RNA.374-201ENST00000365606 101 ntBASIC1.31□□□□□ -2.2
KRT1P04264 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms