Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MIR760-201ENST00000390220 80 ntBASIC0.2□□□□□ -2.38
CLDN1O95832 RNA5SP25-201ENST00000410815 110 ntBASIC0.2□□□□□ -2.38
CLDN1O95832 AC073261.1-201ENST00000429409 121 ntBASIC0.2□□□□□ -2.38
CLDN1O95832 RNU6-109P-201ENST00000516364 107 ntBASIC0.2□□□□□ -2.38
CLDN1O95832 RNU6-184P-201ENST00000516514 107 ntBASIC0.2□□□□□ -2.38
CLDN1O95832 MIR4696-201ENST00000581431 70 ntBASIC0.2□□□□□ -2.38
CLDN1O95832 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.2□□□□□ -2.38
CLDN1O95832 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
CLDN1O95832 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
CLDN1O95832 RNU6-664P-201ENST00000362381 107 ntBASIC0.19□□□□□ -2.38
CLDN1O95832 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
CLDN1O95832 MIR501-201ENST00000390204 84 ntBASIC0.19□□□□□ -2.38
CLDN1O95832 AL035461.1-201ENST00000421490 332 ntBASIC0.19□□□□□ -2.38
CLDN1O95832 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CLDN1O95832 SNORD116-10-201ENST00000363791 102 ntBASIC0.18□□□□□ -2.38
CLDN1O95832 RNU6-935P-201ENST00000410371 100 ntBASIC0.18□□□□□ -2.38
CLDN1O95832 RNU6-1232P-201ENST00000516299 86 ntBASIC0.18□□□□□ -2.38
CLDN1O95832 NAMPTP3-201ENST00000569273 224 ntBASIC0.18□□□□□ -2.38
CLDN1O95832 MIR548AD-201ENST00000584780 82 ntBASIC0.18□□□□□ -2.38
CLDN1O95832 U7.6-201ENST00000610841 64 ntBASIC0.18□□□□□ -2.38
CLDN1O95832 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.18□□□□□ -2.38
CLDN1O95832 MIR450A1-201ENST00000362262 91 ntBASIC0.17□□□□□ -2.38
CLDN1O95832 AC006210.1-201ENST00000424882 111 ntBASIC0.17□□□□□ -2.38
CLDN1O95832 SNORD4B-201ENST00000459083 72 ntBASIC0.17□□□□□ -2.38
CLDN1O95832 RNU7-61P-201ENST00000515897 61 ntBASIC0.17□□□□□ -2.38
CLDN1O95832 AC069503.3-201ENST00000618674 145 ntBASIC0.17□□□□□ -2.38
CLDN1O95832 SNORA63.4-201ENST00000362763 126 ntBASIC0.16□□□□□ -2.38
CLDN1O95832 RNU6-161P-201ENST00000363051 106 ntBASIC0.16□□□□□ -2.38
CLDN1O95832 Y_RNA.125-201ENST00000363371 111 ntBASIC0.16□□□□□ -2.38
CLDN1O95832 SNORD110-201ENST00000408189 75 ntBASIC0.16□□□□□ -2.38
CLDN1O95832 Z95118.1-201ENST00000421372 247 ntBASIC0.16□□□□□ -2.38
CLDN1O95832 HMGN2P22-201ENST00000427588 175 ntBASIC0.16□□□□□ -2.38
CLDN1O95832 MTATP8P2-201ENST00000435212 202 ntBASIC0.16□□□□□ -2.38
CLDN1O95832 RNU6-65P-201ENST00000516332 98 ntBASIC0.16□□□□□ -2.38
CLDN1O95832 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.16□□□□□ -2.38
CLDN1O95832 MIR216B-201ENST00000390186 82 ntBASIC0.15□□□□□ -2.39
CLDN1O95832 RNU6-127P-201ENST00000390897 107 ntBASIC0.15□□□□□ -2.39
CLDN1O95832 MIR4536-1-201ENST00000583537 88 ntBASIC0.15□□□□□ -2.39
CLDN1O95832 MIR4677-201ENST00000584153 80 ntBASIC0.15□□□□□ -2.39
CLDN1O95832 AP001318.4-201ENST00000616637 121 ntBASIC0.15□□□□□ -2.39
CLDN1O95832 MIR2052-201ENST00000636055 55 ntBASIC0.15□□□□□ -2.39
CLDN1O95832 RNU6-147P-201ENST00000383983 107 ntBASIC0.14□□□□□ -2.39
CLDN1O95832 MT-TY-201ENST00000387409 66 ntBASIC0.14□□□□□ -2.39
CLDN1O95832 RNU6-782P-201ENST00000516852 104 ntBASIC0.14□□□□□ -2.39
CLDN1O95832 Y_RNA.185-201ENST00000363894 100 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 Y_RNA.239-201ENST00000364444 113 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 RNA5SP331-201ENST00000364986 107 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 RNU6-132P-201ENST00000383863 107 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 RNU6-44P-201ENST00000384045 107 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 MIR548H2-201ENST00000408874 88 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 RNU6-519P-201ENST00000410590 108 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 SNORA25.13-201ENST00000516395 103 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 MIR3064-201ENST00000581130 66 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 U7.3-201ENST00000616123 62 ntBASIC0.13□□□□□ -2.39
CLDN1O95832 Y_RNA.290-201ENST00000364879 114 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 Y_RNA.348-201ENST00000365403 103 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 RNU6-32P-201ENST00000383948 107 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 RNU6-13P-201ENST00000384248 107 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 RNU6-30P-201ENST00000384561 107 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 RNU6-12P-201ENST00000384604 107 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 RNU6-41P-201ENST00000384741 107 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 MIR548U-201ENST00000390728 81 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 U3.27-201ENST00000391237 200 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 RNU7-129P-201ENST00000516128 62 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 RNU6-758P-201ENST00000516292 89 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 Y_RNA.677-201ENST00000516401 85 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 MIR4743-201ENST00000584576 69 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 AC104996.3-201ENST00000590718 94 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.12□□□□□ -2.39
CLDN1O95832 MIR548O2-201ENST00000616090 70 ntBASIC0.12□□□□□ -2.39
CLDN1O95832 MIRLET7F1-201ENST00000362202 87 ntBASIC0.11□□□□□ -2.39
CLDN1O95832 MIR451A-201ENST00000385059 72 ntBASIC0.11□□□□□ -2.39
CLDN1O95832 MIR4460-201ENST00000577862 86 ntBASIC0.11□□□□□ -2.39
CLDN1O95832 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
CLDN1O95832 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.11□□□□□ -2.39
CLDN1O95832 MIR499B-201ENST00000636498 73 ntBASIC0.11□□□□□ -2.39
CLDN1O95832 RNA5SP98-201ENST00000363158 137 ntBASIC0.1□□□□□ -2.39
CLDN1O95832 RNU6-811P-201ENST00000384069 107 ntBASIC0.1□□□□□ -2.39
CLDN1O95832 MIR876-201ENST00000401147 81 ntBASIC0.1□□□□□ -2.39
CLDN1O95832 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.1□□□□□ -2.39
CLDN1O95832 SNORA40.13-201ENST00000516379 120 ntBASIC0.1□□□□□ -2.39
CLDN1O95832 RNU6-1057P-201ENST00000517162 102 ntBASIC0.1□□□□□ -2.39
CLDN1O95832 RNU6-640P-201ENST00000363693 105 ntBASIC0.09□□□□□ -2.4
CLDN1O95832 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
CLDN1O95832 Y_RNA.495-201ENST00000384435 112 ntBASIC0.09□□□□□ -2.4
CLDN1O95832 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
CLDN1O95832 MIR4493-201ENST00000584016 73 ntBASIC0.09□□□□□ -2.4
CLDN1O95832 MIR3925-201ENST00000584674 77 ntBASIC0.09□□□□□ -2.4
CLDN1O95832 AC026421.1-201ENST00000519101 163 ntBASIC0.08□□□□□ -2.4
CLDN1O95832 YWHAEP2-201ENST00000580066 112 ntBASIC0.08□□□□□ -2.4
CLDN1O95832 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
CLDN1O95832 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
CLDN1O95832 RNA5SP368-201ENST00000364298 116 ntBASIC0.07□□□□□ -2.4
CLDN1O95832 SNORD114-15-201ENST00000364687 72 ntBASIC0.07□□□□□ -2.4
CLDN1O95832 Y_RNA.491-201ENST00000384417 107 ntBASIC0.07□□□□□ -2.4
CLDN1O95832 RNU6-905P-201ENST00000384434 107 ntBASIC0.07□□□□□ -2.4
CLDN1O95832 RNA5SP292-201ENST00000390974 118 ntBASIC0.07□□□□□ -2.4
CLDN1O95832 SNORA75.1-201ENST00000391130 148 ntBASIC0.07□□□□□ -2.4
CLDN1O95832 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CLDN1O95832 RNU6-162P-201ENST00000516228 103 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms