Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 Y_RNA.36-201ENST00000362602 112 ntBASIC1.08□□□□□ -2.24
CNOT4O95628 SNORD114-27-201ENST00000363766 70 ntBASIC1.08□□□□□ -2.24
CNOT4O95628 MIR520E-201ENST00000384867 87 ntBASIC1.08□□□□□ -2.24
CNOT4O95628 RPS29P1-201ENST00000465274 159 ntBASIC1.08□□□□□ -2.24
CNOT4O95628 MIR4639-201ENST00000584938 69 ntBASIC1.08□□□□□ -2.24
CNOT4O95628 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.08□□□□□ -2.24
CNOT4O95628 U6.81-201ENST00000612550 106 ntBASIC1.08□□□□□ -2.24
CNOT4O95628 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CNOT4O95628 RNU6-824P-201ENST00000363724 104 ntBASIC1.07□□□□□ -2.24
CNOT4O95628 RNA5SP325-201ENST00000363756 130 ntBASIC1.07□□□□□ -2.24
CNOT4O95628 RNU6-154P-201ENST00000384306 106 ntBASIC1.07□□□□□ -2.24
CNOT4O95628 MIR573-201ENST00000384964 99 ntBASIC1.07□□□□□ -2.24
CNOT4O95628 MIR617-201ENST00000385030 97 ntBASIC1.07□□□□□ -2.24
CNOT4O95628 RNU6-1177P-201ENST00000391058 104 ntBASIC1.07□□□□□ -2.24
CNOT4O95628 RNU6-1223P-201ENST00000517124 104 ntBASIC1.07□□□□□ -2.24
CNOT4O95628 MIR6779-201ENST00000617283 64 ntBASIC1.07□□□□□ -2.24
CNOT4O95628 SNORA8.1-201ENST00000384250 140 ntBASIC1.06□□□□□ -2.24
CNOT4O95628 SNORD28-201ENST00000384706 75 ntBASIC1.06□□□□□ -2.24
CNOT4O95628 MIR216B-201ENST00000390186 82 ntBASIC1.06□□□□□ -2.24
CNOT4O95628 AC139453.2-201ENST00000487255 133 ntBASIC1.06□□□□□ -2.24
CNOT4O95628 RNU6-1015P-201ENST00000517121 99 ntBASIC1.06□□□□□ -2.24
CNOT4O95628 AC025627.3-201ENST00000582078 182 ntBASIC1.06□□□□□ -2.24
CNOT4O95628 AC244669.1-204ENST00000621564 178 ntBASIC1.06□□□□□ -2.24
CNOT4O95628 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
CNOT4O95628 RNU6-1335P-201ENST00000365426 107 ntBASIC1.05□□□□□ -2.24
CNOT4O95628 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
CNOT4O95628 RNU6-871P-201ENST00000516122 100 ntBASIC1.05□□□□□ -2.24
CNOT4O95628 MIR151B-201ENST00000584249 96 ntBASIC1.05□□□□□ -2.24
CNOT4O95628 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
CNOT4O95628 MIR664A-201ENST00000626086 82 ntBASIC1.05□□□□□ -2.24
CNOT4O95628 RNU6-330P-201ENST00000363015 107 ntBASIC1.04□□□□□ -2.24
CNOT4O95628 SNORD18A-201ENST00000363753 72 ntBASIC1.04□□□□□ -2.24
CNOT4O95628 MIR519E-201ENST00000385075 84 ntBASIC1.04□□□□□ -2.24
CNOT4O95628 RNU6-587P-201ENST00000391282 106 ntBASIC1.04□□□□□ -2.24
CNOT4O95628 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.04□□□□□ -2.24
CNOT4O95628 MIR3612-201ENST00000579753 87 ntBASIC1.04□□□□□ -2.24
CNOT4O95628 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
CNOT4O95628 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.03□□□□□ -2.24
CNOT4O95628 RNU7-74P-201ENST00000459104 62 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 AC114801.3-201ENST00000510231 177 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 ACA64.5-201ENST00000516207 127 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 RNA5SP255-201ENST00000516370 107 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 RNU6-687P-201ENST00000516443 89 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 RNA5SP47-201ENST00000517230 109 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 MIR3678-201ENST00000578455 94 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CNOT4O95628 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 PVT1_3.1-201ENST00000620853 95 ntBASIC1.03□□□□□ -2.24
CNOT4O95628 Y_RNA.258-201ENST00000364613 105 ntBASIC1.02□□□□□ -2.25
CNOT4O95628 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CNOT4O95628 SNORD41.1-201ENST00000391000 69 ntBASIC1.02□□□□□ -2.25
CNOT4O95628 MIR548L-201ENST00000408303 86 ntBASIC1.02□□□□□ -2.25
CNOT4O95628 MIR548J-201ENST00000408833 112 ntBASIC1.02□□□□□ -2.25
CNOT4O95628 RNU6-274P-201ENST00000459566 107 ntBASIC1.02□□□□□ -2.25
CNOT4O95628 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
CNOT4O95628 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
CNOT4O95628 MIR4773-1-201ENST00000637203 78 ntBASIC1.02□□□□□ -2.25
CNOT4O95628 RNU6-382P-201ENST00000365181 106 ntBASIC1.01□□□□□ -2.25
CNOT4O95628 RNU6-1241P-201ENST00000384536 107 ntBASIC1.01□□□□□ -2.25
CNOT4O95628 RNU6-634P-201ENST00000459134 106 ntBASIC1.01□□□□□ -2.25
CNOT4O95628 MIR3675-201ENST00000583661 73 ntBASIC1.01□□□□□ -2.25
CNOT4O95628 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1□□□□□ -2.25
CNOT4O95628 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
CNOT4O95628 MIR548O2-201ENST00000616090 70 ntBASIC1□□□□□ -2.25
CNOT4O95628 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
CNOT4O95628 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
CNOT4O95628 RNU6-726P-201ENST00000364680 107 ntBASIC0.99□□□□□ -2.25
CNOT4O95628 MIR154-201ENST00000385243 84 ntBASIC0.99□□□□□ -2.25
CNOT4O95628 SNORD99-201ENST00000408612 74 ntBASIC0.99□□□□□ -2.25
CNOT4O95628 SNORD75.2-201ENST00000408784 58 ntBASIC0.99□□□□□ -2.25
CNOT4O95628 RNU6-752P-201ENST00000516376 102 ntBASIC0.99□□□□□ -2.25
CNOT4O95628 SCARNA16.5-201ENST00000517114 183 ntBASIC0.99□□□□□ -2.25
CNOT4O95628 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.99□□□□□ -2.25
CNOT4O95628 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
CNOT4O95628 RNU6-716P-201ENST00000365621 103 ntBASIC0.98□□□□□ -2.25
CNOT4O95628 AC011195.1-201ENST00000578177 177 ntBASIC0.98□□□□□ -2.25
CNOT4O95628 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
CNOT4O95628 AC244098.3-201ENST00000424803 96 ntBASIC0.97□□□□□ -2.25
CNOT4O95628 RNU7-24P-201ENST00000458867 62 ntBASIC0.97□□□□□ -2.25
CNOT4O95628 PSMC1P5-201ENST00000512850 177 ntBASIC0.97□□□□□ -2.25
CNOT4O95628 MIR18A-201ENST00000362310 71 ntBASIC0.96□□□□□ -2.26
CNOT4O95628 RNU6-495P-201ENST00000362995 107 ntBASIC0.96□□□□□ -2.26
CNOT4O95628 Y_RNA.205-201ENST00000364128 113 ntBASIC0.96□□□□□ -2.26
CNOT4O95628 RNU4-45P-201ENST00000365469 141 ntBASIC0.96□□□□□ -2.26
CNOT4O95628 RNU6-788P-201ENST00000390967 104 ntBASIC0.96□□□□□ -2.26
CNOT4O95628 AC093423.1-201ENST00000440817 142 ntBASIC0.96□□□□□ -2.26
CNOT4O95628 RNU6-539P-201ENST00000516665 103 ntBASIC0.96□□□□□ -2.26
CNOT4O95628 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.96□□□□□ -2.26
CNOT4O95628 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
CNOT4O95628 RNU6-54P-201ENST00000365563 107 ntBASIC0.95□□□□□ -2.26
CNOT4O95628 AL691482.2-201ENST00000457453 84 ntBASIC0.95□□□□□ -2.26
CNOT4O95628 RNU6V-201ENST00000384105 107 ntBASIC0.94□□□□□ -2.26
CNOT4O95628 NAMPTP3-201ENST00000569273 224 ntBASIC0.94□□□□□ -2.26
CNOT4O95628 MIR4460-201ENST00000577862 86 ntBASIC0.94□□□□□ -2.26
CNOT4O95628 MIR6828-201ENST00000636181 60 ntBASIC0.94□□□□□ -2.26
CNOT4O95628 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CNOT4O95628 SNORD45.1-201ENST00000363181 77 ntBASIC0.93□□□□□ -2.26
CNOT4O95628 RNU1-141P-201ENST00000364623 158 ntBASIC0.93□□□□□ -2.26
CNOT4O95628 RNU6-590P-201ENST00000365039 107 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms