Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC082651.2-201ENST00000496833 166 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 MIR5693-201ENST00000577722 73 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 MIR548AG1-201ENST00000579932 66 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 AC005520.4-201ENST00000604337 90 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 AC025253.1-201ENST00000613623 543 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 AC012531.4-201ENST00000616509 177 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 RNU6-561P-201ENST00000516222 102 ntBASIC-1.62□□□□□ -2.67
ABCA1O95477 MIR4536-1-201ENST00000583537 88 ntBASIC-1.62□□□□□ -2.67
ABCA1O95477 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.62□□□□□ -2.67
ABCA1O95477 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.63□□□□□ -2.67
ABCA1O95477 RNU6-132P-201ENST00000383863 107 ntBASIC-1.63□□□□□ -2.67
ABCA1O95477 U6.97-201ENST00000636904 101 ntBASIC-1.63□□□□□ -2.67
ABCA1O95477 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.63□□□□□ -2.67
ABCA1O95477 RNU6-260P-201ENST00000384092 107 ntBASIC-1.63□□□□□ -2.67
ABCA1O95477 MIR548A1-201ENST00000385041 97 ntBASIC-1.63□□□□□ -2.67
ABCA1O95477 RNU7-123P-201ENST00000515911 60 ntBASIC-1.63□□□□□ -2.67
ABCA1O95477 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.64□□□□□ -2.67
ABCA1O95477 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.64□□□□□ -2.67
ABCA1O95477 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.64□□□□□ -2.67
ABCA1O95477 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.64□□□□□ -2.67
ABCA1O95477 SNORA25.1-201ENST00000362326 128 ntBASIC-1.64□□□□□ -2.67
ABCA1O95477 SNORA63.2-201ENST00000362603 126 ntBASIC-1.64□□□□□ -2.67
ABCA1O95477 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.64□□□□□ -2.67
ABCA1O95477 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.64□□□□□ -2.67
ABCA1O95477 MIR6739-201ENST00000622461 75 ntBASIC-1.64□□□□□ -2.67
ABCA1O95477 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 RNU6-662P-201ENST00000384253 104 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 RNU6-246P-201ENST00000384702 107 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.65□□□□□ -2.67
ABCA1O95477 RNA5SP147-201ENST00000516493 109 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 AP002392.1-201ENST00000537692 208 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.65□□□□□ -2.67
ABCA1O95477 SNORD116-25-201ENST00000516517 92 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 AL365265.1-201ENST00000621045 234 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 AC090574.1-201ENST00000623186 233 ntBASIC-1.65□□□□□ -2.67
ABCA1O95477 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.66□□□□□ -2.67
ABCA1O95477 MIR520D-201ENST00000385002 87 ntBASIC-1.66□□□□□ -2.67
ABCA1O95477 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.66□□□□□ -2.67
ABCA1O95477 RNU6-506P-201ENST00000516553 94 ntBASIC-1.66□□□□□ -2.67
ABCA1O95477 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.66□□□□□ -2.67
ABCA1O95477 MIR3974-201ENST00000637126 96 ntBASIC-1.66□□□□□ -2.67
ABCA1O95477 SNORD81.2-201ENST00000365153 76 ntBASIC-1.66□□□□□ -2.68
ABCA1O95477 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.66□□□□□ -2.68
ABCA1O95477 MIR34C-201ENST00000384831 77 ntBASIC-1.66□□□□□ -2.68
ABCA1O95477 RNY4P25-201ENST00000459254 96 ntBASIC-1.66□□□□□ -2.68
ABCA1O95477 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.67□□□□□ -2.68
ABCA1O95477 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.67□□□□□ -2.68
ABCA1O95477 SNORD38.1-201ENST00000363863 68 ntBASIC-1.67□□□□□ -2.68
ABCA1O95477 SNORD2.1-201ENST00000458762 69 ntBASIC-1.67□□□□□ -2.68
ABCA1O95477 RNU7-152P-201ENST00000458982 64 ntBASIC-1.67□□□□□ -2.68
ABCA1O95477 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.67□□□□□ -2.68
ABCA1O95477 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.67□□□□□ -2.68
ABCA1O95477 RPS29P30-201ENST00000600975 111 ntBASIC-1.67□□□□□ -2.68
ABCA1O95477 MIR203A-201ENST00000384836 110 ntBASIC-1.68□□□□□ -2.68
ABCA1O95477 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.68□□□□□ -2.68
ABCA1O95477 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.68□□□□□ -2.68
ABCA1O95477 MIR23C-201ENST00000579846 100 ntBASIC-1.68□□□□□ -2.68
ABCA1O95477 RNU6-682P-201ENST00000363843 106 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 RNU6-106P-201ENST00000384405 107 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 RNY4P10-201ENST00000365571 96 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 RNU6-240P-201ENST00000516098 97 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 RNY4P20-201ENST00000516678 93 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 RNU6-861P-201ENST00000516745 106 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 AC078883.4-201ENST00000623218 367 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 AC073869.6-201ENST00000640656 341 ntBASIC-1.69□□□□□ -2.68
ABCA1O95477 RNU6-696P-201ENST00000390834 107 ntBASIC-1.7□□□□□ -2.68
ABCA1O95477 RNU7-164P-201ENST00000459221 62 ntBASIC-1.7□□□□□ -2.68
ABCA1O95477 MIR509-1-201ENST00000385265 94 ntBASIC-1.7□□□□□ -2.68
ABCA1O95477 MIR509-2-201ENST00000390724 91 ntBASIC-1.7□□□□□ -2.68
ABCA1O95477 RNU6-75P-201ENST00000515944 104 ntBASIC-1.7□□□□□ -2.68
ABCA1O95477 RNA5SP106-201ENST00000517274 100 ntBASIC-1.7□□□□□ -2.68
ABCA1O95477 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 RNU6-478P-201ENST00000363904 110 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 SNORD113-3-201ENST00000364830 72 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 MIR548U-201ENST00000390728 81 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 RNU4-14P-201ENST00000410858 122 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 MIR4744-201ENST00000581563 82 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 MIR3170-201ENST00000582699 77 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 AL137067.1-201ENST00000615933 120 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 AC104985.2-201ENST00000620598 500 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 RNU6-121P-201ENST00000410525 99 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 MTATP6P21-201ENST00000440681 189 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 AC092794.1-201ENST00000612734 582 ntBASIC-1.71□□□□□ -2.68
ABCA1O95477 MIR559-201ENST00000385188 96 ntBASIC-1.72□□□□□ -2.68
ABCA1O95477 RNU6-65P-201ENST00000516332 98 ntBASIC-1.72□□□□□ -2.68
ABCA1O95477 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.72□□□□□ -2.68
ABCA1O95477 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.72□□□□□ -2.68
ABCA1O95477 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.72□□□□□ -2.68
ABCA1O95477 SNORD116.3-201ENST00000517176 78 ntBASIC-1.72□□□□□ -2.68
ABCA1O95477 AC021753.1-201ENST00000635724 168 ntBASIC-1.72□□□□□ -2.68
ABCA1O95477 AL512310.12-203ENST00000640543 90 ntBASIC-1.72□□□□□ -2.68
ABCA1O95477 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms