Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PTCD1O75127 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
PTCD1O75127 Y_RNA.32-201ENST00000362589 110 ntBASIC1.73□□□□□ -2.13
PTCD1O75127 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.73□□□□□ -2.13
PTCD1O75127 SNORD75.2-201ENST00000408784 58 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 AL691482.2-201ENST00000457453 84 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 RNU6-752P-201ENST00000516376 102 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 SNORA40.17-201ENST00000517256 115 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
PTCD1O75127 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-495P-201ENST00000362995 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-54P-201ENST00000365563 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-1039P-201ENST00000383931 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-1126P-201ENST00000384002 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-614P-201ENST00000384369 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 U3.27-201ENST00000391237 200 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU7-56P-201ENST00000458744 62 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 SNORA31.14-201ENST00000516728 116 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-1057P-201ENST00000517162 102 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU7-161P-201ENST00000517289 62 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 U6.59-201ENST00000615686 107 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 AC069503.3-201ENST00000618674 145 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 AC092634.7-201ENST00000621022 103 ntBASIC1.71□□□□□ -2.14
PTCD1O75127 RNU6-1079P-201ENST00000362861 110 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PTCD1O75127 MIR1827-201ENST00000408549 66 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 RNA5SP61-201ENST00000516453 100 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 MIR3920-201ENST00000581751 86 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 MIR3660-201ENST00000584845 100 ntBASIC1.7□□□□□ -2.14
PTCD1O75127 RNA5SP403-201ENST00000363598 108 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 SNORD114-27-201ENST00000363766 70 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 Y_RNA.236-201ENST00000364427 111 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 SNORD42B-201ENST00000458893 67 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 uc_338.16-201ENST00000621804 95 ntBASIC1.69□□□□□ -2.14
PTCD1O75127 RNU7-13P-201ENST00000516413 62 ntBASIC1.68□□□□□ -2.14
PTCD1O75127 MIR6509-201ENST00000614603 85 ntBASIC1.68□□□□□ -2.14
PTCD1O75127 RNU6-446P-201ENST00000362827 106 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 SNORD115-24-201ENST00000363528 82 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 RNA5SP192-201ENST00000364404 120 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 Y_RNA.375-201ENST00000365625 101 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 RNU7-24P-201ENST00000458867 62 ntBASIC1.67□□□□□ -2.14
PTCD1O75127 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PTCD1O75127 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
PTCD1O75127 SNORD89-201ENST00000390981 114 ntBASIC1.66□□□□□ -2.14
PTCD1O75127 RMST_2.1-201ENST00000617263 136 ntBASIC1.66□□□□□ -2.14
PTCD1O75127 RNU6-668P-201ENST00000364180 107 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 SNORD115-44-201ENST00000365391 82 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 MIR519E-201ENST00000385075 84 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
PTCD1O75127 MIR3657-201ENST00000584818 117 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 MIR548O2-201ENST00000616090 70 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 AC073869.9-201ENST00000641610 120 ntBASIC1.65□□□□□ -2.15
PTCD1O75127 RNU6-990P-201ENST00000364385 104 ntBASIC1.64□□□□□ -2.15
PTCD1O75127 RNU6-645P-201ENST00000364649 106 ntBASIC1.64□□□□□ -2.15
PTCD1O75127 RNU7-104P-201ENST00000459398 79 ntBASIC1.64□□□□□ -2.15
PTCD1O75127 RNU6-42P-201ENST00000384165 107 ntBASIC1.63□□□□□ -2.15
PTCD1O75127 AL136317.1-201ENST00000612653 226 ntBASIC1.63□□□□□ -2.15
PTCD1O75127 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.62□□□□□ -2.15
PTCD1O75127 SNORA25.5-201ENST00000363782 126 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 RNU1-93P-201ENST00000364704 169 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 SNORD113-4-201ENST00000364802 75 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 FABP5P4-201ENST00000437203 171 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 MIR466-201ENST00000580653 84 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 MIR6734-201ENST00000621166 68 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 MIR7978-201ENST00000636158 59 ntBASIC1.62□□□□□ -2.15
PTCD1O75127 RNU6V-201ENST00000384105 107 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 SNORD26-201ENST00000384147 75 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 RNA5SP220-201ENST00000516298 104 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 RNU6-542P-201ENST00000516405 103 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 RNA5SP147-201ENST00000516493 109 ntBASIC1.61□□□□□ -2.15
PTCD1O75127 MIR26B-201ENST00000362251 77 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 MIR617-201ENST00000385030 97 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 SNORA75.1-201ENST00000391130 148 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 MTND4LP1-201ENST00000446263 157 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 SNORD124-201ENST00000459577 104 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 SCARNA21.1-201ENST00000515996 128 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 RNU6-656P-201ENST00000516785 107 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 AC068338.1-201ENST00000565567 176 ntBASIC1.6□□□□□ -2.15
PTCD1O75127 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.6□□□□□ -2.15
PTCD1O75127 SNORA25.8-201ENST00000364831 128 ntBASIC1.59□□□□□ -2.15
PTCD1O75127 MIR520E-201ENST00000384867 87 ntBASIC1.59□□□□□ -2.15
PTCD1O75127 RNA5SP299-201ENST00000391203 116 ntBASIC1.59□□□□□ -2.15
PTCD1O75127 MIR19B1-201ENST00000384829 87 ntBASIC1.58□□□□□ -2.16
PTCD1O75127 MIR644A-201ENST00000385262 94 ntBASIC1.58□□□□□ -2.16
PTCD1O75127 RNU6-1110P-201ENST00000516462 101 ntBASIC1.58□□□□□ -2.16
PTCD1O75127 RNU6-260P-201ENST00000384092 107 ntBASIC1.57□□□□□ -2.16
PTCD1O75127 U7.7-201ENST00000459276 60 ntBASIC1.57□□□□□ -2.16
PTCD1O75127 RPS29P1-201ENST00000465274 159 ntBASIC1.57□□□□□ -2.16
PTCD1O75127 MIR6767-201ENST00000637302 66 ntBASIC1.57□□□□□ -2.16
PTCD1O75127 Y_RNA.174-201ENST00000363781 105 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 RNA5SP117-201ENST00000365294 118 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 SNORD105-201ENST00000386910 85 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 MIR758-201ENST00000390227 88 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 RPS29P23-201ENST00000458635 123 ntBASIC1.56□□□□□ -2.16
PTCD1O75127 MIR200A-201ENST00000384875 90 ntBASIC1.55□□□□□ -2.16
PTCD1O75127 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PTCD1O75127 snoU13.13-201ENST00000458842 104 ntBASIC1.53□□□□□ -2.16
PTCD1O75127 AC067863.3-201ENST00000624172 122 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 553.1 ms