Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
GFRA3O60609 Y_RNA.69-201ENST00000362885 109 ntBASIC2.12□□□□□ -2.07
GFRA3O60609 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
GFRA3O60609 MIR579-201ENST00000385221 98 ntBASIC2.11□□□□□ -2.07
GFRA3O60609 SNORD111-201ENST00000408139 94 ntBASIC2.11□□□□□ -2.07
GFRA3O60609 SNORA25.15-201ENST00000516487 89 ntBASIC2.11□□□□□ -2.07
GFRA3O60609 RNU7-160P-201ENST00000516660 62 ntBASIC2.11□□□□□ -2.07
GFRA3O60609 RNU1-119P-201ENST00000391122 165 ntBASIC2.1□□□□□ -2.07
GFRA3O60609 MIR548H4-201ENST00000408689 111 ntBASIC2.1□□□□□ -2.07
GFRA3O60609 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
GFRA3O60609 MIR4452-201ENST00000583004 71 ntBASIC2.1□□□□□ -2.07
GFRA3O60609 AL136317.1-201ENST00000612653 226 ntBASIC2.1□□□□□ -2.07
GFRA3O60609 AL773524.1-201ENST00000614065 229 ntBASIC2.1□□□□□ -2.07
GFRA3O60609 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
GFRA3O60609 MIR6073-201ENST00000352083 89 ntBASIC2.09□□□□□ -2.07
GFRA3O60609 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
GFRA3O60609 MIR652-201ENST00000385278 98 ntBASIC2.09□□□□□ -2.07
GFRA3O60609 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
GFRA3O60609 MIR548E-201ENST00000408287 88 ntBASIC2.09□□□□□ -2.07
GFRA3O60609 SCARNA17.3-201ENST00000516381 125 ntBASIC2.09□□□□□ -2.07
GFRA3O60609 AL157834.3-201ENST00000615543 103 ntBASIC2.09□□□□□ -2.07
GFRA3O60609 AC010297.1-201ENST00000623948 149 ntBASIC2.09□□□□□ -2.07
GFRA3O60609 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
GFRA3O60609 VTRNA1-1-201ENST00000363120 99 ntBASIC2.08□□□□□ -2.08
GFRA3O60609 AL451105.1-201ENST00000450005 189 ntBASIC2.08□□□□□ -2.08
GFRA3O60609 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
GFRA3O60609 SNORA75.2-201ENST00000391138 150 ntBASIC2.07□□□□□ -2.08
GFRA3O60609 SNORA75.3-201ENST00000391231 150 ntBASIC2.07□□□□□ -2.08
GFRA3O60609 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.07□□□□□ -2.08
GFRA3O60609 RNU6-165P-201ENST00000517170 99 ntBASIC2.07□□□□□ -2.08
GFRA3O60609 MIR4658-201ENST00000584344 65 ntBASIC2.07□□□□□ -2.08
GFRA3O60609 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
GFRA3O60609 SNORA7.1-201ENST00000363750 139 ntBASIC2.06□□□□□ -2.08
GFRA3O60609 RNU6-726P-201ENST00000364680 107 ntBASIC2.06□□□□□ -2.08
GFRA3O60609 Y_RNA.327-201ENST00000365201 102 ntBASIC2.06□□□□□ -2.08
GFRA3O60609 RNU7-151P-201ENST00000516930 53 ntBASIC2.06□□□□□ -2.08
GFRA3O60609 AC244669.1-204ENST00000621564 178 ntBASIC2.06□□□□□ -2.08
GFRA3O60609 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
GFRA3O60609 Y_RNA.178-201ENST00000363832 102 ntBASIC2.05□□□□□ -2.08
GFRA3O60609 MIR516B1-201ENST00000385211 90 ntBASIC2.05□□□□□ -2.08
GFRA3O60609 MIR644A-201ENST00000385262 94 ntBASIC2.05□□□□□ -2.08
GFRA3O60609 MIR1255B2-201ENST00000408618 67 ntBASIC2.05□□□□□ -2.08
GFRA3O60609 AC023827.1-201ENST00000569247 97 ntBASIC2.05□□□□□ -2.08
GFRA3O60609 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.05□□□□□ -2.08
GFRA3O60609 AC243829.3-201ENST00000622177 108 ntBASIC2.05□□□□□ -2.08
GFRA3O60609 U6.96-201ENST00000636425 70 ntBASIC2.05□□□□□ -2.08
GFRA3O60609 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
GFRA3O60609 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
GFRA3O60609 RNA5SP181-201ENST00000410246 98 ntBASIC2.04□□□□□ -2.08
GFRA3O60609 RNA5SP402-201ENST00000517148 110 ntBASIC2.04□□□□□ -2.08
GFRA3O60609 SNORA31.25-201ENST00000517242 134 ntBASIC2.04□□□□□ -2.08
GFRA3O60609 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
GFRA3O60609 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
GFRA3O60609 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
GFRA3O60609 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
GFRA3O60609 RNU6-598P-201ENST00000364017 105 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 RNU6-392P-201ENST00000364926 101 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 RNU6-458P-201ENST00000384179 107 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 SNORA8.2-201ENST00000384372 139 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 MIR329-2-201ENST00000385029 84 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 SNORA67.5-201ENST00000391036 107 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 RNA5SP484-201ENST00000458857 111 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 MIR4303-201ENST00000581299 66 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 MIR4639-201ENST00000584938 69 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 U6.58-201ENST00000613107 107 ntBASIC2.02□□□□□ -2.09
GFRA3O60609 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
GFRA3O60609 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
GFRA3O60609 MIR125B1-201ENST00000385236 88 ntBASIC2.01□□□□□ -2.09
GFRA3O60609 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
GFRA3O60609 MIR548AE1-201ENST00000583292 70 ntBASIC2.01□□□□□ -2.09
GFRA3O60609 MIR6515-201ENST00000619843 57 ntBASIC2.01□□□□□ -2.09
GFRA3O60609 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
GFRA3O60609 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
GFRA3O60609 Y_RNA.363-201ENST00000365529 113 ntBASIC2□□□□□ -2.09
GFRA3O60609 RNU7-95P-201ENST00000459222 64 ntBASIC2□□□□□ -2.09
GFRA3O60609 AC048334.1-201ENST00000477975 159 ntBASIC2□□□□□ -2.09
GFRA3O60609 U2.18-201ENST00000622185 84 ntBASIC2□□□□□ -2.09
GFRA3O60609 MIR302D-201ENST00000362275 68 ntBASIC1.99□□□□□ -2.09
GFRA3O60609 Y_RNA.206-201ENST00000364136 102 ntBASIC1.99□□□□□ -2.09
GFRA3O60609 Y_RNA.407-201ENST00000383986 113 ntBASIC1.99□□□□□ -2.09
GFRA3O60609 MIR29B1-201ENST00000385015 81 ntBASIC1.99□□□□□ -2.09
GFRA3O60609 MIR548L-201ENST00000408303 86 ntBASIC1.99□□□□□ -2.09
GFRA3O60609 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
GFRA3O60609 AL137847.3-201ENST00000611521 109 ntBASIC1.99□□□□□ -2.09
GFRA3O60609 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
GFRA3O60609 RNU6-828P-201ENST00000364876 107 ntBASIC1.98□□□□□ -2.09
GFRA3O60609 RNU6-945P-201ENST00000383947 107 ntBASIC1.98□□□□□ -2.09
GFRA3O60609 MIR520F-201ENST00000384824 87 ntBASIC1.98□□□□□ -2.09
GFRA3O60609 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
GFRA3O60609 MIR5194-201ENST00000582634 120 ntBASIC1.98□□□□□ -2.09
GFRA3O60609 AC243829.6-201ENST00000612652 106 ntBASIC1.98□□□□□ -2.09
GFRA3O60609 RNU6-133P-201ENST00000383989 107 ntBASIC1.97□□□□□ -2.09
GFRA3O60609 MIR100-201ENST00000385259 80 ntBASIC1.97□□□□□ -2.09
GFRA3O60609 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
GFRA3O60609 AC002350.1-201ENST00000490759 375 ntBASIC1.97□□□□□ -2.09
GFRA3O60609 PVT1_3.1-201ENST00000620853 95 ntBASIC1.97□□□□□ -2.09
GFRA3O60609 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
GFRA3O60609 MIR21-201ENST00000362134 72 ntBASIC1.96□□□□□ -2.1
GFRA3O60609 RNA5SP393-201ENST00000363423 117 ntBASIC1.96□□□□□ -2.1
GFRA3O60609 RNU6-135P-201ENST00000516769 101 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms