Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.78□□□□□ -2.28
PEX1O43933 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
PEX1O43933 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PEX1O43933 RNU6-161P-201ENST00000363051 106 ntBASIC0.77□□□□□ -2.29
PEX1O43933 SNORA24B-201ENST00000384176 131 ntBASIC0.77□□□□□ -2.29
PEX1O43933 MIR617-201ENST00000385030 97 ntBASIC0.77□□□□□ -2.29
PEX1O43933 RNU6-129P-201ENST00000391022 107 ntBASIC0.77□□□□□ -2.29
PEX1O43933 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
PEX1O43933 Y_RNA.685-201ENST00000516532 108 ntBASIC0.77□□□□□ -2.29
PEX1O43933 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.77□□□□□ -2.29
PEX1O43933 MIR4712-201ENST00000583750 82 ntBASIC0.77□□□□□ -2.29
PEX1O43933 AC022709.1-201ENST00000615967 87 ntBASIC0.77□□□□□ -2.29
PEX1O43933 SNORA36.2-201ENST00000384004 127 ntBASIC0.76□□□□□ -2.29
PEX1O43933 RNU4-45P-201ENST00000365469 141 ntBASIC0.75□□□□□ -2.29
PEX1O43933 RNU6-269P-201ENST00000391077 97 ntBASIC0.75□□□□□ -2.29
PEX1O43933 MIR548L-201ENST00000408303 86 ntBASIC0.75□□□□□ -2.29
PEX1O43933 RNA5SP268-201ENST00000516828 124 ntBASIC0.75□□□□□ -2.29
PEX1O43933 MIR7107-201ENST00000611489 80 ntBASIC0.75□□□□□ -2.29
PEX1O43933 RNA5SP517-201ENST00000364724 117 ntBASIC0.74□□□□□ -2.29
PEX1O43933 AC093423.1-201ENST00000440817 142 ntBASIC0.74□□□□□ -2.29
PEX1O43933 RNA5SP227-201ENST00000516184 113 ntBASIC0.74□□□□□ -2.29
PEX1O43933 RNU6-557P-201ENST00000516842 110 ntBASIC0.74□□□□□ -2.29
PEX1O43933 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
PEX1O43933 MIR140-201ENST00000385282 100 ntBASIC0.73□□□□□ -2.29
PEX1O43933 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
PEX1O43933 RNU6-279P-201ENST00000391297 101 ntBASIC0.73□□□□□ -2.29
PEX1O43933 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
PEX1O43933 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.73□□□□□ -2.29
PEX1O43933 RNU6-1057P-201ENST00000517162 102 ntBASIC0.73□□□□□ -2.29
PEX1O43933 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
PEX1O43933 MIR6515-201ENST00000619843 57 ntBASIC0.73□□□□□ -2.29
PEX1O43933 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.73□□□□□ -2.29
PEX1O43933 AL162376.1-201ENST00000624117 175 ntBASIC0.73□□□□□ -2.29
PEX1O43933 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
PEX1O43933 MIRLET7A1-201ENST00000362295 80 ntBASIC0.72□□□□□ -2.29
PEX1O43933 RNU6-208P-201ENST00000362431 107 ntBASIC0.72□□□□□ -2.29
PEX1O43933 SNORD77.2-201ENST00000391045 68 ntBASIC0.72□□□□□ -2.29
PEX1O43933 RNU6-857P-201ENST00000515893 110 ntBASIC0.72□□□□□ -2.29
PEX1O43933 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
PEX1O43933 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.72□□□□□ -2.29
PEX1O43933 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
PEX1O43933 RNU6-315P-201ENST00000362666 107 ntBASIC0.71□□□□□ -2.3
PEX1O43933 SNORA8.2-201ENST00000384372 139 ntBASIC0.71□□□□□ -2.3
PEX1O43933 Y_RNA.532-201ENST00000384590 113 ntBASIC0.71□□□□□ -2.3
PEX1O43933 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
PEX1O43933 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.71□□□□□ -2.3
PEX1O43933 RNU5F-1-201ENST00000362507 117 ntBASIC0.7□□□□□ -2.3
PEX1O43933 Y_RNA.258-201ENST00000364613 105 ntBASIC0.7□□□□□ -2.3
PEX1O43933 RNU6-686P-201ENST00000364839 107 ntBASIC0.7□□□□□ -2.3
PEX1O43933 RNY4P3-201ENST00000365254 95 ntBASIC0.7□□□□□ -2.3
PEX1O43933 U3.27-201ENST00000391237 200 ntBASIC0.7□□□□□ -2.3
PEX1O43933 RNA5SP484-201ENST00000458857 111 ntBASIC0.7□□□□□ -2.3
PEX1O43933 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
PEX1O43933 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
PEX1O43933 RNU6-824P-201ENST00000363724 104 ntBASIC0.69□□□□□ -2.3
PEX1O43933 MIR4752-201ENST00000579672 72 ntBASIC0.69□□□□□ -2.3
PEX1O43933 SNORA25.18-201ENST00000607153 114 ntBASIC0.69□□□□□ -2.3
PEX1O43933 MIR548O2-201ENST00000616090 70 ntBASIC0.69□□□□□ -2.3
PEX1O43933 RNU1-141P-201ENST00000364623 158 ntBASIC0.68□□□□□ -2.3
PEX1O43933 Y_RNA.660-201ENST00000516002 120 ntBASIC0.68□□□□□ -2.3
PEX1O43933 Y_RNA.12-201ENST00000362393 112 ntBASIC0.67□□□□□ -2.3
PEX1O43933 RNU6-54P-201ENST00000365563 107 ntBASIC0.67□□□□□ -2.3
PEX1O43933 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
PEX1O43933 RNU6-1177P-201ENST00000391058 104 ntBASIC0.67□□□□□ -2.3
PEX1O43933 RNU7-74P-201ENST00000459104 62 ntBASIC0.67□□□□□ -2.3
PEX1O43933 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
PEX1O43933 RNU6-638P-201ENST00000516582 104 ntBASIC0.67□□□□□ -2.3
PEX1O43933 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
PEX1O43933 RNU1-29P-201ENST00000606574 126 ntBASIC0.67□□□□□ -2.3
PEX1O43933 AC092634.7-201ENST00000621022 103 ntBASIC0.67□□□□□ -2.3
PEX1O43933 Y_RNA.371-201ENST00000365591 113 ntBASIC0.66□□□□□ -2.3
PEX1O43933 RNU6V-201ENST00000384105 107 ntBASIC0.66□□□□□ -2.3
PEX1O43933 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
PEX1O43933 AC069271.1-201ENST00000445577 156 ntBASIC0.66□□□□□ -2.3
PEX1O43933 AC097510.1-201ENST00000510945 133 ntBASIC0.66□□□□□ -2.3
PEX1O43933 RNA5SP436-201ENST00000516020 115 ntBASIC0.66□□□□□ -2.3
PEX1O43933 NAMPTP3-201ENST00000569273 224 ntBASIC0.66□□□□□ -2.3
PEX1O43933 SNORD118-201ENST00000363593 134 ntBASIC0.65□□□□□ -2.31
PEX1O43933 Y_RNA.244-201ENST00000364484 109 ntBASIC0.65□□□□□ -2.31
PEX1O43933 Y_RNA.264-201ENST00000364665 102 ntBASIC0.65□□□□□ -2.31
PEX1O43933 RNU6-24P-201ENST00000384440 107 ntBASIC0.65□□□□□ -2.31
PEX1O43933 MIR598-201ENST00000384868 97 ntBASIC0.65□□□□□ -2.31
PEX1O43933 MT-TY-201ENST00000387409 66 ntBASIC0.65□□□□□ -2.31
PEX1O43933 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
PEX1O43933 U6.81-201ENST00000612550 106 ntBASIC0.65□□□□□ -2.31
PEX1O43933 SNORA70.25-201ENST00000612741 95 ntBASIC0.65□□□□□ -2.31
PEX1O43933 Y_RNA.788-201ENST00000622394 112 ntBASIC0.65□□□□□ -2.31
PEX1O43933 RNU6-340P-201ENST00000364005 107 ntBASIC0.64□□□□□ -2.31
PEX1O43933 RNU2-59P-201ENST00000410482 191 ntBASIC0.64□□□□□ -2.31
PEX1O43933 SCARNA18B-201ENST00000458806 135 ntBASIC0.64□□□□□ -2.31
PEX1O43933 MIR4460-201ENST00000577862 86 ntBASIC0.64□□□□□ -2.31
PEX1O43933 YWHAEP2-201ENST00000580066 112 ntBASIC0.64□□□□□ -2.31
PEX1O43933 YWHAEP3-201ENST00000582767 121 ntBASIC0.64□□□□□ -2.31
PEX1O43933 MIR4484-201ENST00000582855 83 ntBASIC0.64□□□□□ -2.31
PEX1O43933 RNU6-382P-201ENST00000365181 106 ntBASIC0.63□□□□□ -2.31
PEX1O43933 MIR216B-201ENST00000390186 82 ntBASIC0.63□□□□□ -2.31
PEX1O43933 Y_RNA.606-201ENST00000410579 103 ntBASIC0.63□□□□□ -2.31
PEX1O43933 SNORA40.8-201ENST00000411034 126 ntBASIC0.63□□□□□ -2.31
PEX1O43933 SNORD42B-201ENST00000458893 67 ntBASIC0.63□□□□□ -2.31
PEX1O43933 RNU5B-6P-201ENST00000516765 68 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 842.5 ms