Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SNORD110-201ENST00000408189 75 ntBASIC0.37□□□□□ -2.35
PHGDHO43175 FGF7P7-201ENST00000514120 227 ntBASIC0.37□□□□□ -2.35
PHGDHO43175 RNU6-1057P-201ENST00000517162 102 ntBASIC0.37□□□□□ -2.35
PHGDHO43175 RNU6-844P-201ENST00000517175 102 ntBASIC0.37□□□□□ -2.35
PHGDHO43175 MIR3140-201ENST00000583685 90 ntBASIC0.37□□□□□ -2.35
PHGDHO43175 RNU6-1298P-201ENST00000362456 101 ntBASIC0.36□□□□□ -2.35
PHGDHO43175 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
PHGDHO43175 MIR489-201ENST00000384923 84 ntBASIC0.36□□□□□ -2.35
PHGDHO43175 MIR760-201ENST00000390220 80 ntBASIC0.36□□□□□ -2.35
PHGDHO43175 AC006210.1-201ENST00000424882 111 ntBASIC0.36□□□□□ -2.35
PHGDHO43175 MIR4460-201ENST00000577862 86 ntBASIC0.36□□□□□ -2.35
PHGDHO43175 MIR499B-201ENST00000636498 73 ntBASIC0.36□□□□□ -2.35
PHGDHO43175 RNU6-848P-201ENST00000515948 107 ntBASIC0.35□□□□□ -2.35
PHGDHO43175 RNA5SP436-201ENST00000516020 115 ntBASIC0.35□□□□□ -2.35
PHGDHO43175 RNU6-617P-201ENST00000516147 107 ntBASIC0.35□□□□□ -2.35
PHGDHO43175 RNU6-473P-201ENST00000516164 107 ntBASIC0.35□□□□□ -2.35
PHGDHO43175 RNU6-1049P-201ENST00000516414 107 ntBASIC0.35□□□□□ -2.35
PHGDHO43175 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
PHGDHO43175 Y_RNA.694-201ENST00000516677 117 ntBASIC0.35□□□□□ -2.35
PHGDHO43175 RNU5B-6P-201ENST00000516765 68 ntBASIC0.35□□□□□ -2.35
PHGDHO43175 MIR5582-201ENST00000579697 68 ntBASIC0.35□□□□□ -2.35
PHGDHO43175 RNU6-219P-201ENST00000364728 107 ntBASIC0.34□□□□□ -2.36
PHGDHO43175 SNORD116-22-201ENST00000384430 92 ntBASIC0.34□□□□□ -2.36
PHGDHO43175 Y_RNA.620-201ENST00000411009 88 ntBASIC0.34□□□□□ -2.36
PHGDHO43175 HMGN2P22-201ENST00000427588 175 ntBASIC0.34□□□□□ -2.36
PHGDHO43175 RNU7-129P-201ENST00000516128 62 ntBASIC0.34□□□□□ -2.36
PHGDHO43175 MIR5706-201ENST00000579841 80 ntBASIC0.34□□□□□ -2.36
PHGDHO43175 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
PHGDHO43175 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
PHGDHO43175 YWHAEP2-201ENST00000580066 112 ntBASIC0.33□□□□□ -2.36
PHGDHO43175 SNORA9.1-201ENST00000362412 131 ntBASIC0.32□□□□□ -2.36
PHGDHO43175 RNU6-633P-201ENST00000362612 103 ntBASIC0.32□□□□□ -2.36
PHGDHO43175 SNORD114-23-201ENST00000363536 72 ntBASIC0.32□□□□□ -2.36
PHGDHO43175 RNA5SP128-201ENST00000365305 116 ntBASIC0.32□□□□□ -2.36
PHGDHO43175 RNU6-1051P-201ENST00000365471 102 ntBASIC0.32□□□□□ -2.36
PHGDHO43175 MT-TY-201ENST00000387409 66 ntBASIC0.32□□□□□ -2.36
PHGDHO43175 MIR1236-201ENST00000408340 102 ntBASIC0.32□□□□□ -2.36
PHGDHO43175 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
PHGDHO43175 PVT1_3.1-201ENST00000620853 95 ntBASIC0.32□□□□□ -2.36
PHGDHO43175 Y_RNA.17-201ENST00000362433 111 ntBASIC0.31□□□□□ -2.36
PHGDHO43175 RNU6-1134P-201ENST00000365156 101 ntBASIC0.31□□□□□ -2.36
PHGDHO43175 MIR501-201ENST00000390204 84 ntBASIC0.31□□□□□ -2.36
PHGDHO43175 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.31□□□□□ -2.36
PHGDHO43175 AC069113.3-201ENST00000521019 150 ntBASIC0.31□□□□□ -2.36
PHGDHO43175 MIR4473-201ENST00000583731 91 ntBASIC0.31□□□□□ -2.36
PHGDHO43175 MIR548O2-201ENST00000616090 70 ntBASIC0.31□□□□□ -2.36
PHGDHO43175 AC069503.3-201ENST00000618674 145 ntBASIC0.31□□□□□ -2.36
PHGDHO43175 RNU6V-201ENST00000384105 107 ntBASIC0.3□□□□□ -2.36
PHGDHO43175 Y_RNA.558-201ENST00000384685 113 ntBASIC0.3□□□□□ -2.36
PHGDHO43175 RNA5SP170-201ENST00000517150 101 ntBASIC0.3□□□□□ -2.36
PHGDHO43175 MIR4796-201ENST00000580742 81 ntBASIC0.3□□□□□ -2.36
PHGDHO43175 U7.6-201ENST00000610841 64 ntBASIC0.3□□□□□ -2.36
PHGDHO43175 MIR7111-201ENST00000619751 72 ntBASIC0.3□□□□□ -2.36
PHGDHO43175 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
PHGDHO43175 SNORA63.2-201ENST00000362603 126 ntBASIC0.29□□□□□ -2.36
PHGDHO43175 MIR519C-201ENST00000385053 87 ntBASIC0.29□□□□□ -2.36
PHGDHO43175 Y_RNA.593-201ENST00000410292 98 ntBASIC0.29□□□□□ -2.36
PHGDHO43175 RN7SL793P-201ENST00000583259 296 ntBASIC0.29□□□□□ -2.36
PHGDHO43175 AC010487.4-201ENST00000637027 61 ntBASIC0.29□□□□□ -2.36
PHGDHO43175 RNU6-127P-201ENST00000390897 107 ntBASIC0.28□□□□□ -2.36
PHGDHO43175 U3.27-201ENST00000391237 200 ntBASIC0.28□□□□□ -2.36
PHGDHO43175 MTATP6P29-201ENST00000415057 132 ntBASIC0.28□□□□□ -2.36
PHGDHO43175 snoU13.17-201ENST00000458802 104 ntBASIC0.28□□□□□ -2.36
PHGDHO43175 MIR548AE1-201ENST00000583292 70 ntBASIC0.28□□□□□ -2.36
PHGDHO43175 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
PHGDHO43175 Y_RNA.125-201ENST00000363371 111 ntBASIC0.27□□□□□ -2.37
PHGDHO43175 RNU6-294P-201ENST00000364999 102 ntBASIC0.27□□□□□ -2.37
PHGDHO43175 RNU6-54P-201ENST00000365563 107 ntBASIC0.27□□□□□ -2.37
PHGDHO43175 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
PHGDHO43175 MIR4677-201ENST00000584153 80 ntBASIC0.27□□□□□ -2.37
PHGDHO43175 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
PHGDHO43175 RNU6-497P-201ENST00000365316 104 ntBASIC0.26□□□□□ -2.37
PHGDHO43175 Y_RNA.369-201ENST00000365568 117 ntBASIC0.26□□□□□ -2.37
PHGDHO43175 SNORA24B-201ENST00000384176 131 ntBASIC0.26□□□□□ -2.37
PHGDHO43175 MIR548AD-201ENST00000584780 82 ntBASIC0.26□□□□□ -2.37
PHGDHO43175 MIR548BB-201ENST00000626714 66 ntBASIC0.26□□□□□ -2.37
PHGDHO43175 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
PHGDHO43175 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
PHGDHO43175 RNU6-675P-201ENST00000384236 104 ntBASIC0.25□□□□□ -2.37
PHGDHO43175 MIR643-201ENST00000385267 97 ntBASIC0.25□□□□□ -2.37
PHGDHO43175 SNORA25.13-201ENST00000516395 103 ntBASIC0.25□□□□□ -2.37
PHGDHO43175 RNU6-762P-201ENST00000517107 102 ntBASIC0.25□□□□□ -2.37
PHGDHO43175 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.25□□□□□ -2.37
PHGDHO43175 MIR3925-201ENST00000584674 77 ntBASIC0.25□□□□□ -2.37
PHGDHO43175 Y_RNA.36-201ENST00000362602 112 ntBASIC0.24□□□□□ -2.37
PHGDHO43175 Y_RNA.73-201ENST00000362910 113 ntBASIC0.24□□□□□ -2.37
PHGDHO43175 MIR216B-201ENST00000390186 82 ntBASIC0.24□□□□□ -2.37
PHGDHO43175 Y_RNA.611-201ENST00000410682 108 ntBASIC0.24□□□□□ -2.37
PHGDHO43175 Y_RNA.437-201ENST00000384113 113 ntBASIC0.23□□□□□ -2.37
PHGDHO43175 MIR516B1-201ENST00000385211 90 ntBASIC0.23□□□□□ -2.37
PHGDHO43175 SNORD42B-201ENST00000458893 67 ntBASIC0.23□□□□□ -2.37
PHGDHO43175 AC093729.1-201ENST00000513074 128 ntBASIC0.23□□□□□ -2.37
PHGDHO43175 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
PHGDHO43175 uc_338.10-201ENST00000621872 182 ntBASIC0.23□□□□□ -2.37
PHGDHO43175 IGLL4P-201ENST00000614590 133 ntBASIC0.22□□□□□ -2.37
PHGDHO43175 RNU6-1255P-201ENST00000363434 112 ntBASIC0.21□□□□□ -2.38
PHGDHO43175 RNY1P1-201ENST00000364372 112 ntBASIC0.21□□□□□ -2.38
PHGDHO43175 Y_RNA.258-201ENST00000364613 105 ntBASIC0.21□□□□□ -2.38
PHGDHO43175 RNY4P3-201ENST00000365254 95 ntBASIC0.21□□□□□ -2.38
PHGDHO43175 Y_RNA.407-201ENST00000383986 113 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 323 ms