Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MIR4536-1-201ENST00000583537 88 ntBASIC-2.46□□□□□ -2.8
HMGB3O15347 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.46□□□□□ -2.8
HMGB3O15347 RNU6-363P-201ENST00000362895 105 ntBASIC-2.47□□□□□ -2.8
HMGB3O15347 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.47□□□□□ -2.8
HMGB3O15347 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.47□□□□□ -2.8
HMGB3O15347 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 SNORA24B-201ENST00000384176 131 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 AC108019.1-201ENST00000512540 175 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.48□□□□□ -2.81
HMGB3O15347 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 MIR487B-201ENST00000385021 84 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 MIR3140-201ENST00000583685 90 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.5□□□□□ -2.81
HMGB3O15347 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.5□□□□□ -2.81
HMGB3O15347 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.5□□□□□ -2.81
HMGB3O15347 RNY3P16-201ENST00000516338 101 ntBASIC-2.5□□□□□ -2.81
HMGB3O15347 RNY1P11-201ENST00000363759 113 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 SNORD115-27-201ENST00000364430 82 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 SNORD50.2-201ENST00000365465 70 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 CYP3A54P-201ENST00000566950 75 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 SNORA33.1-201ENST00000364957 130 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 RNU6-260P-201ENST00000384092 107 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 RNU6-80P-201ENST00000384195 107 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 RNU6-118P-201ENST00000516552 102 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 AL442128.1-201ENST00000615151 90 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 MIR664B-201ENST00000626756 61 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 RNU6-623P-201ENST00000363143 105 ntBASIC-2.53□□□□□ -2.81
HMGB3O15347 MIR759-201ENST00000390224 91 ntBASIC-2.53□□□□□ -2.81
HMGB3O15347 snoU13.17-201ENST00000458802 104 ntBASIC-2.53□□□□□ -2.81
HMGB3O15347 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 RNU6-132P-201ENST00000383863 107 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 RNU6-493P-201ENST00000391321 108 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.54□□□□□ -2.82
HMGB3O15347 AC025521.1-201ENST00000621624 286 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 MIR496-201ENST00000385226 102 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 Z83846.1-201ENST00000446798 265 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 RNU7-85P-201ENST00000458851 63 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 MTND1P19-201ENST00000511780 315 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 MIR4756-201ENST00000577874 78 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 MIR6844-201ENST00000637122 62 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 RNU6-409P-201ENST00000384114 104 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 RNU6-168P-201ENST00000516189 101 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 RNU7-154P-201ENST00000516194 62 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 MIR4643-201ENST00000577473 78 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 MIR3646-201ENST00000578301 84 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 MIR4490-201ENST00000582647 84 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 U6.106-201ENST00000636360 105 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.57□□□□□ -2.82
HMGB3O15347 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.57□□□□□ -2.82
HMGB3O15347 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.57□□□□□ -2.82
HMGB3O15347 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.57□□□□□ -2.82
HMGB3O15347 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.58□□□□□ -2.82
HMGB3O15347 MIR548U-201ENST00000390728 81 ntBASIC-2.58□□□□□ -2.82
HMGB3O15347 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.59□□□□□ -2.82
HMGB3O15347 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.59□□□□□ -2.82
HMGB3O15347 MIR548D2-201ENST00000384955 97 ntBASIC-2.59□□□□□ -2.82
HMGB3O15347 RNU6-980P-201ENST00000516925 103 ntBASIC-2.59□□□□□ -2.82
HMGB3O15347 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 RNU6-400P-201ENST00000391173 106 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 AC090616.4-201ENST00000448026 115 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 AP002795.1-201ENST00000534879 84 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 MIR3064-201ENST00000581130 66 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 AC006254.2-201ENST00000603259 279 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.61□□□□□ -2.83
HMGB3O15347 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.61□□□□□ -2.83
HMGB3O15347 AC113195.1-201ENST00000579952 141 ntBASIC-2.61□□□□□ -2.83
HMGB3O15347 MIR5683-201ENST00000636514 76 ntBASIC-2.61□□□□□ -2.83
HMGB3O15347 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.62□□□□□ -2.83
HMGB3O15347 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.62□□□□□ -2.83
HMGB3O15347 MT-TW-201ENST00000387382 68 ntBASIC-2.62□□□□□ -2.83
HMGB3O15347 RNA5SP147-201ENST00000516493 109 ntBASIC-2.62□□□□□ -2.83
HMGB3O15347 RNU6-382P-201ENST00000365181 106 ntBASIC-2.63□□□□□ -2.83
HMGB3O15347 RNY4P28-201ENST00000365281 93 ntBASIC-2.63□□□□□ -2.83
HMGB3O15347 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.63□□□□□ -2.83
HMGB3O15347 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.63□□□□□ -2.83
HMGB3O15347 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.63□□□□□ -2.83
HMGB3O15347 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.64□□□□□ -2.83
HMGB3O15347 MIR519A2-201ENST00000384990 87 ntBASIC-2.64□□□□□ -2.83
HMGB3O15347 RPL35AP4-201ENST00000412007 102 ntBASIC-2.64□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms