Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RNU6-829P-201ENST00000363700 112 ntBASIC1.28□□□□□ -2.2
C1QTNF3-AMACRE9PGA6 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
C1QTNF3-AMACRE9PGA6 AL591704.2-201ENST00000421658 181 ntBASIC1.28□□□□□ -2.2
C1QTNF3-AMACRE9PGA6 RNU7-56P-201ENST00000458744 62 ntBASIC1.28□□□□□ -2.2
C1QTNF3-AMACRE9PGA6 AL136317.1-201ENST00000612653 226 ntBASIC1.28□□□□□ -2.2
C1QTNF3-AMACRE9PGA6 MIR7111-201ENST00000619751 72 ntBASIC1.28□□□□□ -2.2
C1QTNF3-AMACRE9PGA6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNA5SP192-201ENST00000364404 120 ntBASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6-645P-201ENST00000364649 106 ntBASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6-669P-201ENST00000365575 107 ntBASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6-910P-201ENST00000390844 107 ntBASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6-902P-201ENST00000517212 91 ntBASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR3657-201ENST00000584818 117 ntBASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 uc_338.16-201ENST00000621804 95 ntBASIC1.27□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR1-1-201ENST00000362147 71 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNA5SP403-201ENST00000363598 108 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6V-201ENST00000384105 107 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 AC067940.1-201ENST00000458411 300 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU7-24P-201ENST00000458867 62 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU7-21P-201ENST00000459430 62 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6-542P-201ENST00000516405 103 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR466-201ENST00000580653 84 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR8070-201ENST00000616510 88 ntBASIC1.26□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR617-201ENST00000385030 97 ntBASIC1.25□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR519E-201ENST00000385075 84 ntBASIC1.25□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 SNORD42B-201ENST00000458893 67 ntBASIC1.25□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 AC073869.9-201ENST00000641610 120 ntBASIC1.25□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 SNORA25.5-201ENST00000363782 126 ntBASIC1.24□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6-990P-201ENST00000364385 104 ntBASIC1.24□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 Y_RNA.375-201ENST00000365625 101 ntBASIC1.24□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR644A-201ENST00000385262 94 ntBASIC1.24□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNA5SP299-201ENST00000391203 116 ntBASIC1.24□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU7-90P-201ENST00000459216 62 ntBASIC1.24□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR548V-201ENST00000584165 80 ntBASIC1.24□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR548O2-201ENST00000616090 70 ntBASIC1.24□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 AC067863.3-201ENST00000624172 122 ntBASIC1.24□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 Y_RNA.174-201ENST00000363781 105 ntBASIC1.23□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 Y_RNA.236-201ENST00000364427 111 ntBASIC1.23□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6-260P-201ENST00000384092 107 ntBASIC1.23□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR548C-201ENST00000384815 97 ntBASIC1.23□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 Y_RNA.118-201ENST00000363300 101 ntBASIC1.22□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 MIR216B-201ENST00000390186 82 ntBASIC1.22□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.22□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 SCARNA21.1-201ENST00000515996 128 ntBASIC1.22□□□□□ -2.21
C1QTNF3-AMACRE9PGA6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR548L-201ENST00000408303 86 ntBASIC1.21□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.2□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR499A-201ENST00000384903 122 ntBASIC1.2□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 SNORD79.1-201ENST00000516069 84 ntBASIC1.2□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RMST_2.1-201ENST00000617263 136 ntBASIC1.2□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNU6-940P-201ENST00000363433 104 ntBASIC1.19□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNA5SP117-201ENST00000365294 118 ntBASIC1.19□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNU6-1335P-201ENST00000365426 107 ntBASIC1.19□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 snoU13.13-201ENST00000458842 104 ntBASIC1.19□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNU6-656P-201ENST00000516785 107 ntBASIC1.19□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR7978-201ENST00000636158 59 ntBASIC1.19□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNU6-716P-201ENST00000365621 103 ntBASIC1.18□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR7-2-201ENST00000384970 110 ntBASIC1.18□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR222-201ENST00000384992 110 ntBASIC1.18□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 SNORA75.1-201ENST00000391130 148 ntBASIC1.18□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR1287-201ENST00000408492 90 ntBASIC1.18□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNU5B-6P-201ENST00000516765 68 ntBASIC1.18□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR4460-201ENST00000577862 86 ntBASIC1.18□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 AC244669.1-204ENST00000621564 178 ntBASIC1.18□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNU6-446P-201ENST00000362827 106 ntBASIC1.17□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 SNORA2.1-201ENST00000363089 137 ntBASIC1.17□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR1827-201ENST00000408549 66 ntBASIC1.17□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNU6-1089P-201ENST00000516473 104 ntBASIC1.17□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 SNORA70.22-201ENST00000517160 124 ntBASIC1.17□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 SNORA40.17-201ENST00000517256 115 ntBASIC1.17□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.17□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR630-201ENST00000384957 97 ntBASIC1.16□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 SNORD89-201ENST00000390981 114 ntBASIC1.16□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR1276-201ENST00000408707 83 ntBASIC1.16□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 AC002350.1-201ENST00000490759 375 ntBASIC1.16□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 RNU6-469P-201ENST00000516253 101 ntBASIC1.16□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 MIR6504-201ENST00000613520 61 ntBASIC1.16□□□□□ -2.22
C1QTNF3-AMACRE9PGA6 AL157398.1-201ENST00000452981 186 ntBASIC1.15□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 Y_RNA.722-201ENST00000517279 114 ntBASIC1.15□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU6-936P-201ENST00000384005 107 ntBASIC1.14□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 SNORD28-201ENST00000384706 75 ntBASIC1.14□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 MT-TY-201ENST00000387409 66 ntBASIC1.14□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU7-74P-201ENST00000459104 62 ntBASIC1.14□□□□□ -2.23
C1QTNF3-AMACRE9PGA6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms