Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 RNU6-260P-201ENST00000384092 107 ntBASIC1.71□□□□□ -2.14
SPDYE3A6NKU9 MIR617-201ENST00000385030 97 ntBASIC1.71□□□□□ -2.14
SPDYE3A6NKU9 MIR644A-201ENST00000385262 94 ntBASIC1.71□□□□□ -2.14
SPDYE3A6NKU9 RNU6-910P-201ENST00000390844 107 ntBASIC1.71□□□□□ -2.14
SPDYE3A6NKU9 AC067940.1-201ENST00000458411 300 ntBASIC1.71□□□□□ -2.14
SPDYE3A6NKU9 MIR548V-201ENST00000584165 80 ntBASIC1.71□□□□□ -2.14
SPDYE3A6NKU9 MIR378A-201ENST00000362177 66 ntBASIC1.7□□□□□ -2.14
SPDYE3A6NKU9 RNU6-656P-201ENST00000516785 107 ntBASIC1.7□□□□□ -2.14
SPDYE3A6NKU9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.69□□□□□ -2.14
SPDYE3A6NKU9 AL591704.2-201ENST00000421658 181 ntBASIC1.69□□□□□ -2.14
SPDYE3A6NKU9 AL354695.1-201ENST00000427935 228 ntBASIC1.69□□□□□ -2.14
SPDYE3A6NKU9 snoU13.13-201ENST00000458842 104 ntBASIC1.68□□□□□ -2.14
SPDYE3A6NKU9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.68□□□□□ -2.14
SPDYE3A6NKU9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.68□□□□□ -2.14
SPDYE3A6NKU9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.68□□□□□ -2.14
SPDYE3A6NKU9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SPDYE3A6NKU9 MIR4498-201ENST00000577599 66 ntBASIC1.67□□□□□ -2.14
SPDYE3A6NKU9 RNU1-92P-201ENST00000517017 135 ntBASIC1.66□□□□□ -2.14
SPDYE3A6NKU9 MIR4781-201ENST00000585250 76 ntBASIC1.66□□□□□ -2.14
SPDYE3A6NKU9 MIR1-1-201ENST00000362147 71 ntBASIC1.65□□□□□ -2.15
SPDYE3A6NKU9 RNU6-940P-201ENST00000363433 104 ntBASIC1.65□□□□□ -2.15
SPDYE3A6NKU9 RNU6-936P-201ENST00000384005 107 ntBASIC1.65□□□□□ -2.15
SPDYE3A6NKU9 AP1B1P2-201ENST00000416196 106 ntBASIC1.65□□□□□ -2.15
SPDYE3A6NKU9 RNU7-95P-201ENST00000459222 64 ntBASIC1.65□□□□□ -2.15
SPDYE3A6NKU9 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
SPDYE3A6NKU9 RMST_2.1-201ENST00000617263 136 ntBASIC1.65□□□□□ -2.15
SPDYE3A6NKU9 AC067863.3-201ENST00000624172 122 ntBASIC1.65□□□□□ -2.15
SPDYE3A6NKU9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SPDYE3A6NKU9 SNORD79.1-201ENST00000516069 84 ntBASIC1.64□□□□□ -2.15
SPDYE3A6NKU9 RNU6-1089P-201ENST00000516473 104 ntBASIC1.64□□□□□ -2.15
SPDYE3A6NKU9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SPDYE3A6NKU9 SNORA2.1-201ENST00000363089 137 ntBASIC1.63□□□□□ -2.15
SPDYE3A6NKU9 SNORA80D-201ENST00000384488 135 ntBASIC1.63□□□□□ -2.15
SPDYE3A6NKU9 MIR548C-201ENST00000384815 97 ntBASIC1.63□□□□□ -2.15
SPDYE3A6NKU9 MIR630-201ENST00000384957 97 ntBASIC1.63□□□□□ -2.15
SPDYE3A6NKU9 MIR320A-201ENST00000385302 82 ntBASIC1.63□□□□□ -2.15
SPDYE3A6NKU9 RNU7-90P-201ENST00000459216 62 ntBASIC1.63□□□□□ -2.15
SPDYE3A6NKU9 Y_RNA.722-201ENST00000517279 114 ntBASIC1.63□□□□□ -2.15
SPDYE3A6NKU9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SPDYE3A6NKU9 Y_RNA.174-201ENST00000363781 105 ntBASIC1.62□□□□□ -2.15
SPDYE3A6NKU9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
SPDYE3A6NKU9 AL157398.1-201ENST00000452981 186 ntBASIC1.62□□□□□ -2.15
SPDYE3A6NKU9 RNU5B-6P-201ENST00000516765 68 ntBASIC1.62□□□□□ -2.15
SPDYE3A6NKU9 AC244669.1-204ENST00000621564 178 ntBASIC1.62□□□□□ -2.15
SPDYE3A6NKU9 MIR4421-201ENST00000578133 69 ntBASIC1.61□□□□□ -2.15
SPDYE3A6NKU9 AL359821.1-201ENST00000605519 182 ntBASIC1.61□□□□□ -2.15
SPDYE3A6NKU9 snoU13.31-201ENST00000607291 104 ntBASIC1.61□□□□□ -2.15
SPDYE3A6NKU9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SPDYE3A6NKU9 SNORD60.1-201ENST00000362451 73 ntBASIC1.6□□□□□ -2.15
SPDYE3A6NKU9 SNORA7.1-201ENST00000363750 139 ntBASIC1.6□□□□□ -2.15
SPDYE3A6NKU9 MIR7-2-201ENST00000384970 110 ntBASIC1.6□□□□□ -2.15
SPDYE3A6NKU9 MIR216B-201ENST00000390186 82 ntBASIC1.6□□□□□ -2.15
SPDYE3A6NKU9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.6□□□□□ -2.15
SPDYE3A6NKU9 MIR1827-201ENST00000408549 66 ntBASIC1.6□□□□□ -2.15
SPDYE3A6NKU9 RNU6-122P-201ENST00000516818 107 ntBASIC1.6□□□□□ -2.15
SPDYE3A6NKU9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.15
SPDYE3A6NKU9 RNU6-716P-201ENST00000365621 103 ntBASIC1.59□□□□□ -2.15
SPDYE3A6NKU9 MT-TY-201ENST00000387409 66 ntBASIC1.59□□□□□ -2.15
SPDYE3A6NKU9 AC002350.1-201ENST00000490759 375 ntBASIC1.59□□□□□ -2.15
SPDYE3A6NKU9 MIR4460-201ENST00000577862 86 ntBASIC1.59□□□□□ -2.15
SPDYE3A6NKU9 MIR3938-201ENST00000582157 103 ntBASIC1.59□□□□□ -2.15
SPDYE3A6NKU9 RNU6-92P-201ENST00000605893 104 ntBASIC1.59□□□□□ -2.15
SPDYE3A6NKU9 RNU6-1312P-201ENST00000362425 108 ntBASIC1.58□□□□□ -2.16
SPDYE3A6NKU9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.58□□□□□ -2.16
SPDYE3A6NKU9 SNORA70.22-201ENST00000517160 124 ntBASIC1.58□□□□□ -2.16
SPDYE3A6NKU9 AC018659.1-201ENST00000551083 169 ntBASIC1.58□□□□□ -2.16
SPDYE3A6NKU9 MIR6739-201ENST00000622461 75 ntBASIC1.58□□□□□ -2.16
SPDYE3A6NKU9 RNU6-1335P-201ENST00000365426 107 ntBASIC1.57□□□□□ -2.16
SPDYE3A6NKU9 SNORD28-201ENST00000384706 75 ntBASIC1.57□□□□□ -2.16
SPDYE3A6NKU9 MIR548L-201ENST00000408303 86 ntBASIC1.57□□□□□ -2.16
SPDYE3A6NKU9 RNA5SP215-201ENST00000363440 122 ntBASIC1.56□□□□□ -2.16
SPDYE3A6NKU9 RNA5SP117-201ENST00000365294 118 ntBASIC1.56□□□□□ -2.16
SPDYE3A6NKU9 SNORD41.1-201ENST00000391000 69 ntBASIC1.56□□□□□ -2.16
SPDYE3A6NKU9 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
SPDYE3A6NKU9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.55□□□□□ -2.16
SPDYE3A6NKU9 RNU6-1184P-201ENST00000384588 108 ntBASIC1.55□□□□□ -2.16
SPDYE3A6NKU9 SNORD89-201ENST00000390981 114 ntBASIC1.55□□□□□ -2.16
SPDYE3A6NKU9 MIR1287-201ENST00000408492 90 ntBASIC1.55□□□□□ -2.16
SPDYE3A6NKU9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SPDYE3A6NKU9 RNU1-141P-201ENST00000364623 158 ntBASIC1.54□□□□□ -2.16
SPDYE3A6NKU9 RNU6-726P-201ENST00000364680 107 ntBASIC1.54□□□□□ -2.16
SPDYE3A6NKU9 RNU6-269P-201ENST00000391077 97 ntBASIC1.54□□□□□ -2.16
SPDYE3A6NKU9 RNA5SP484-201ENST00000458857 111 ntBASIC1.54□□□□□ -2.16
SPDYE3A6NKU9 RNA5SP327-201ENST00000362494 101 ntBASIC1.53□□□□□ -2.16
SPDYE3A6NKU9 SNORD18A-201ENST00000363753 72 ntBASIC1.53□□□□□ -2.16
SPDYE3A6NKU9 MIR150-201ENST00000385048 84 ntBASIC1.53□□□□□ -2.16
SPDYE3A6NKU9 SNORD12-201ENST00000391002 90 ntBASIC1.53□□□□□ -2.16
SPDYE3A6NKU9 AC002429.1-201ENST00000437672 148 ntBASIC1.53□□□□□ -2.16
SPDYE3A6NKU9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.53□□□□□ -2.16
SPDYE3A6NKU9 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
SPDYE3A6NKU9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.53□□□□□ -2.16
SPDYE3A6NKU9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.52□□□□□ -2.17
SPDYE3A6NKU9 MIR499A-201ENST00000384903 122 ntBASIC1.52□□□□□ -2.17
SPDYE3A6NKU9 MIR548AD-201ENST00000584780 82 ntBASIC1.52□□□□□ -2.17
SPDYE3A6NKU9 MIR4639-201ENST00000584938 69 ntBASIC1.52□□□□□ -2.17
SPDYE3A6NKU9 AL353770.2-201ENST00000620024 78 ntBASIC1.52□□□□□ -2.17
SPDYE3A6NKU9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPDYE3A6NKU9 SNORA33.1-201ENST00000364957 130 ntBASIC1.51□□□□□ -2.17
SPDYE3A6NKU9 MIR222-201ENST00000384992 110 ntBASIC1.51□□□□□ -2.17
SPDYE3A6NKU9 U4.4-201ENST00000620626 117 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 287.5 ms