Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR1289-2-201ENST00000408360 111 ntBASIC2.35□□□□□ -2.03
PCDHGA4Q9Y5G9 AC108210.2-201ENST00000503681 201 ntBASIC2.35□□□□□ -2.03
PCDHGA4Q9Y5G9 uc_338.10-201ENST00000621872 182 ntBASIC2.35□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR521-2-201ENST00000384818 87 ntBASIC2.34□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR17-201ENST00000385012 84 ntBASIC2.34□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR30A-201ENST00000385092 71 ntBASIC2.34□□□□□ -2.03
PCDHGA4Q9Y5G9 MT-TY-201ENST00000387409 66 ntBASIC2.34□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR764-201ENST00000390811 85 ntBASIC2.34□□□□□ -2.03
PCDHGA4Q9Y5G9 AL591806.2-201ENST00000433122 173 ntBASIC2.34□□□□□ -2.03
PCDHGA4Q9Y5G9 AC015712.3-201ENST00000559380 164 ntBASIC2.34□□□□□ -2.03
PCDHGA4Q9Y5G9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHGA4Q9Y5G9 MIR1-1-201ENST00000362147 71 ntBASIC2.33□□□□□ -2.04
PCDHGA4Q9Y5G9 Y_RNA.363-201ENST00000365529 113 ntBASIC2.33□□□□□ -2.04
PCDHGA4Q9Y5G9 MIR520F-201ENST00000384824 87 ntBASIC2.33□□□□□ -2.04
PCDHGA4Q9Y5G9 RNU7-21P-201ENST00000459430 62 ntBASIC2.33□□□□□ -2.04
PCDHGA4Q9Y5G9 SNORA44.1-201ENST00000517031 108 ntBASIC2.33□□□□□ -2.04
PCDHGA4Q9Y5G9 MIR1273D-201ENST00000577266 86 ntBASIC2.33□□□□□ -2.04
PCDHGA4Q9Y5G9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
PCDHGA4Q9Y5G9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHGA4Q9Y5G9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PCDHGA4Q9Y5G9 SNORD114-4-201ENST00000363962 75 ntBASIC2.32□□□□□ -2.04
PCDHGA4Q9Y5G9 MIR517B-201ENST00000385102 67 ntBASIC2.32□□□□□ -2.04
PCDHGA4Q9Y5G9 AL356379.1-201ENST00000414105 126 ntBASIC2.32□□□□□ -2.04
PCDHGA4Q9Y5G9 MIR4460-201ENST00000577862 86 ntBASIC2.32□□□□□ -2.04
PCDHGA4Q9Y5G9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
PCDHGA4Q9Y5G9 RNU6-698P-201ENST00000363523 107 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 RNU6-753P-201ENST00000363926 107 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 RNU6-34P-201ENST00000364874 107 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 RNU6-482P-201ENST00000391068 107 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 RN7SKP88-201ENST00000516847 250 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 MIR4299-201ENST00000577899 72 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 MIR548AD-201ENST00000584780 82 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 7SK.8-201ENST00000612110 250 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 AL136317.1-201ENST00000612653 226 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 7SK.11-201ENST00000615477 250 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 7SK.13-201ENST00000622040 250 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 MIR1291-201ENST00000627649 87 ntBASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.31□□□□□ -2.04
PCDHGA4Q9Y5G9 SNORA80D-201ENST00000384488 135 ntBASIC2.3□□□□□ -2.04
PCDHGA4Q9Y5G9 MIR934-201ENST00000401241 83 ntBASIC2.3□□□□□ -2.04
PCDHGA4Q9Y5G9 SNORD41.1-201ENST00000391000 69 ntBASIC2.29□□□□□ -2.04
PCDHGA4Q9Y5G9 AL603825.1-201ENST00000438481 80 ntBASIC2.29□□□□□ -2.04
PCDHGA4Q9Y5G9 RNU7-90P-201ENST00000459216 62 ntBASIC2.29□□□□□ -2.04
PCDHGA4Q9Y5G9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.29□□□□□ -2.04
PCDHGA4Q9Y5G9 uc_338.20-201ENST00000621563 178 ntBASIC2.29□□□□□ -2.04
PCDHGA4Q9Y5G9 SNORD114-1-201ENST00000362705 72 ntBASIC2.28□□□□□ -2.04
PCDHGA4Q9Y5G9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.28□□□□□ -2.04
PCDHGA4Q9Y5G9 AC026436.1-201ENST00000510537 270 ntBASIC2.28□□□□□ -2.04
PCDHGA4Q9Y5G9 RNU6-135P-201ENST00000516769 101 ntBASIC2.28□□□□□ -2.04
PCDHGA4Q9Y5G9 RNU7-174P-201ENST00000516248 59 ntBASIC2.27□□□□□ -2.05
PCDHGA4Q9Y5G9 AC046143.2-201ENST00000609789 160 ntBASIC2.27□□□□□ -2.05
PCDHGA4Q9Y5G9 MIR21-201ENST00000362134 72 ntBASIC2.26□□□□□ -2.05
PCDHGA4Q9Y5G9 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
PCDHGA4Q9Y5G9 RNU6-548P-201ENST00000517083 115 ntBASIC2.26□□□□□ -2.05
PCDHGA4Q9Y5G9 U2.7-201ENST00000619197 100 ntBASIC2.26□□□□□ -2.05
PCDHGA4Q9Y5G9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDHGA4Q9Y5G9 RNA5SP99-201ENST00000364020 114 ntBASIC2.25□□□□□ -2.05
PCDHGA4Q9Y5G9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.25□□□□□ -2.05
PCDHGA4Q9Y5G9 MIR548L-201ENST00000408303 86 ntBASIC2.25□□□□□ -2.05
PCDHGA4Q9Y5G9 RNA5SP338-201ENST00000410495 85 ntBASIC2.25□□□□□ -2.05
PCDHGA4Q9Y5G9 RNU7-119P-201ENST00000459279 63 ntBASIC2.25□□□□□ -2.05
PCDHGA4Q9Y5G9 AC021146.9-201ENST00000512503 156 ntBASIC2.25□□□□□ -2.05
PCDHGA4Q9Y5G9 MIR4639-201ENST00000584938 69 ntBASIC2.25□□□□□ -2.05
PCDHGA4Q9Y5G9 MIR6873-201ENST00000622788 63 ntBASIC2.25□□□□□ -2.05
PCDHGA4Q9Y5G9 SNORA7.1-201ENST00000363750 139 ntBASIC2.24□□□□□ -2.05
PCDHGA4Q9Y5G9 snoU13.13-201ENST00000458842 104 ntBASIC2.24□□□□□ -2.05
PCDHGA4Q9Y5G9 MIR5007-201ENST00000583098 95 ntBASIC2.24□□□□□ -2.05
PCDHGA4Q9Y5G9 U4.4-201ENST00000620626 117 ntBASIC2.24□□□□□ -2.05
PCDHGA4Q9Y5G9 MIR644A-201ENST00000385262 94 ntBASIC2.23□□□□□ -2.05
PCDHGA4Q9Y5G9 MIR1827-201ENST00000408549 66 ntBASIC2.23□□□□□ -2.05
PCDHGA4Q9Y5G9 Y_RNA.676-201ENST00000516393 96 ntBASIC2.23□□□□□ -2.05
PCDHGA4Q9Y5G9 AL096840.1-201ENST00000603287 93 ntBASIC2.23□□□□□ -2.05
PCDHGA4Q9Y5G9 AC012493.3-201ENST00000604494 112 ntBASIC2.23□□□□□ -2.05
PCDHGA4Q9Y5G9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.23□□□□□ -2.05
PCDHGA4Q9Y5G9 RMST_2.1-201ENST00000617263 136 ntBASIC2.23□□□□□ -2.05
PCDHGA4Q9Y5G9 AC244669.1-204ENST00000621564 178 ntBASIC2.23□□□□□ -2.05
PCDHGA4Q9Y5G9 RNU1-141P-201ENST00000364623 158 ntBASIC2.22□□□□□ -2.05
PCDHGA4Q9Y5G9 SNORA15B-2-201ENST00000384058 135 ntBASIC2.22□□□□□ -2.05
PCDHGA4Q9Y5G9 SNORA15B-1-201ENST00000384334 135 ntBASIC2.22□□□□□ -2.05
PCDHGA4Q9Y5G9 RNU6-910P-201ENST00000390844 107 ntBASIC2.22□□□□□ -2.05
PCDHGA4Q9Y5G9 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
PCDHGA4Q9Y5G9 AC002350.1-201ENST00000490759 375 ntBASIC2.21□□□□□ -2.06
PCDHGA4Q9Y5G9 SNORD79.1-201ENST00000516069 84 ntBASIC2.21□□□□□ -2.06
PCDHGA4Q9Y5G9 RNU6-469P-201ENST00000516253 101 ntBASIC2.21□□□□□ -2.06
PCDHGA4Q9Y5G9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHGA4Q9Y5G9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHGA4Q9Y5G9 SNORD28-201ENST00000384706 75 ntBASIC2.2□□□□□ -2.06
PCDHGA4Q9Y5G9 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
PCDHGA4Q9Y5G9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.2□□□□□ -2.06
PCDHGA4Q9Y5G9 AL353997.5-201ENST00000618886 171 ntBASIC2.2□□□□□ -2.06
PCDHGA4Q9Y5G9 RNA5SP458-201ENST00000516188 119 ntBASIC2.19□□□□□ -2.06
PCDHGA4Q9Y5G9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA4Q9Y5G9 MIR6766-201ENST00000622641 72 ntBASIC2.19□□□□□ -2.06
PCDHGA4Q9Y5G9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA4Q9Y5G9 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
PCDHGA4Q9Y5G9 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
PCDHGA4Q9Y5G9 RNU5B-6P-201ENST00000516765 68 ntBASIC2.18□□□□□ -2.06
PCDHGA4Q9Y5G9 RNU6-980P-201ENST00000516925 103 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms