Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.27□□□□□ -2.21
BRPF3Q9ULD4 MIR3920-201ENST00000581751 86 ntBASIC1.27□□□□□ -2.21
BRPF3Q9ULD4 AL353765.1-201ENST00000605514 183 ntBASIC1.27□□□□□ -2.21
BRPF3Q9ULD4 AC103810.9-201ENST00000606688 112 ntBASIC1.27□□□□□ -2.21
BRPF3Q9ULD4 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.27□□□□□ -2.21
BRPF3Q9ULD4 AC067863.3-201ENST00000624172 122 ntBASIC1.27□□□□□ -2.21
BRPF3Q9ULD4 MIR18A-201ENST00000362310 71 ntBASIC1.26□□□□□ -2.21
BRPF3Q9ULD4 RNU6-624P-201ENST00000363411 107 ntBASIC1.26□□□□□ -2.21
BRPF3Q9ULD4 SNORD90-201ENST00000391145 111 ntBASIC1.26□□□□□ -2.21
BRPF3Q9ULD4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.26□□□□□ -2.21
BRPF3Q9ULD4 MIR4653-201ENST00000585107 83 ntBASIC1.26□□□□□ -2.21
BRPF3Q9ULD4 AC211469.2-201ENST00000605461 205 ntBASIC1.26□□□□□ -2.21
BRPF3Q9ULD4 SNORD114-21-201ENST00000606412 72 ntBASIC1.26□□□□□ -2.21
BRPF3Q9ULD4 MIR6078-201ENST00000611069 100 ntBASIC1.26□□□□□ -2.21
BRPF3Q9ULD4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.26□□□□□ -2.21
BRPF3Q9ULD4 RNU6-392P-201ENST00000364926 101 ntBASIC1.25□□□□□ -2.21
BRPF3Q9ULD4 RNA5SP47-201ENST00000517230 109 ntBASIC1.25□□□□□ -2.21
BRPF3Q9ULD4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.25□□□□□ -2.21
BRPF3Q9ULD4 RNU6-1051P-201ENST00000365471 102 ntBASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 RNU6-129P-201ENST00000391022 107 ntBASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 RNA5SP225-201ENST00000410874 135 ntBASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 RNU6-321P-201ENST00000410912 106 ntBASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 AL450471.1-201ENST00000447509 127 ntBASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 RNU6-1057P-201ENST00000517162 102 ntBASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
BRPF3Q9ULD4 SNORA63.2-201ENST00000362603 126 ntBASIC1.23□□□□□ -2.21
BRPF3Q9ULD4 RNU4-45P-201ENST00000365469 141 ntBASIC1.23□□□□□ -2.21
BRPF3Q9ULD4 RNU6-1126P-201ENST00000384002 107 ntBASIC1.23□□□□□ -2.21
BRPF3Q9ULD4 MIR451A-201ENST00000385059 72 ntBASIC1.23□□□□□ -2.21
BRPF3Q9ULD4 MIR2113-201ENST00000459007 91 ntBASIC1.23□□□□□ -2.21
BRPF3Q9ULD4 FGF7P7-201ENST00000514120 227 ntBASIC1.23□□□□□ -2.21
BRPF3Q9ULD4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.23□□□□□ -2.21
BRPF3Q9ULD4 RNA5SP222-201ENST00000411039 105 ntBASIC1.22□□□□□ -2.21
BRPF3Q9ULD4 MIR548AG2-201ENST00000581228 64 ntBASIC1.22□□□□□ -2.21
BRPF3Q9ULD4 RNY4P3-201ENST00000365254 95 ntBASIC1.21□□□□□ -2.22
BRPF3Q9ULD4 MIR548L-201ENST00000408303 86 ntBASIC1.21□□□□□ -2.22
BRPF3Q9ULD4 TRMT112P2-201ENST00000512910 132 ntBASIC1.21□□□□□ -2.22
BRPF3Q9ULD4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.21□□□□□ -2.22
BRPF3Q9ULD4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
BRPF3Q9ULD4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.2□□□□□ -2.22
BRPF3Q9ULD4 RNU6-478P-201ENST00000363904 110 ntBASIC1.2□□□□□ -2.22
BRPF3Q9ULD4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.2□□□□□ -2.22
BRPF3Q9ULD4 RNU6-557P-201ENST00000516842 110 ntBASIC1.2□□□□□ -2.22
BRPF3Q9ULD4 MIR3140-201ENST00000583685 90 ntBASIC1.2□□□□□ -2.22
BRPF3Q9ULD4 RNU6-161P-201ENST00000363051 106 ntBASIC1.19□□□□□ -2.22
BRPF3Q9ULD4 MIR608-201ENST00000384820 100 ntBASIC1.19□□□□□ -2.22
BRPF3Q9ULD4 RNU6-1108P-201ENST00000516308 104 ntBASIC1.19□□□□□ -2.22
BRPF3Q9ULD4 RNA5SP395-201ENST00000516567 118 ntBASIC1.19□□□□□ -2.22
BRPF3Q9ULD4 MIR4712-201ENST00000583750 82 ntBASIC1.19□□□□□ -2.22
BRPF3Q9ULD4 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.19□□□□□ -2.22
BRPF3Q9ULD4 RNU5F-1-201ENST00000362507 117 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 Y_RNA.94-201ENST00000363068 106 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 RNU4-38P-201ENST00000364472 129 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 SNORA25.9-201ENST00000365087 128 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 RNU6-716P-201ENST00000365621 103 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 MIR617-201ENST00000385030 97 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 SNORD41.1-201ENST00000391000 69 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 RNU6-279P-201ENST00000391297 101 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 RNU6-1052P-201ENST00000411398 104 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 RNU6-719P-201ENST00000516671 104 ntBASIC1.18□□□□□ -2.22
BRPF3Q9ULD4 RNU6-315P-201ENST00000362666 107 ntBASIC1.17□□□□□ -2.22
BRPF3Q9ULD4 RNU6-726P-201ENST00000364680 107 ntBASIC1.17□□□□□ -2.22
BRPF3Q9ULD4 SNORD77.2-201ENST00000391045 68 ntBASIC1.17□□□□□ -2.22
BRPF3Q9ULD4 Y_RNA.660-201ENST00000516002 120 ntBASIC1.17□□□□□ -2.22
BRPF3Q9ULD4 MIR337-201ENST00000362281 93 ntBASIC1.16□□□□□ -2.22
BRPF3Q9ULD4 RNU6-208P-201ENST00000362431 107 ntBASIC1.16□□□□□ -2.22
BRPF3Q9ULD4 snoU13.17-201ENST00000458802 104 ntBASIC1.16□□□□□ -2.22
BRPF3Q9ULD4 SNORD114-27-201ENST00000363766 70 ntBASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 RNU6-686P-201ENST00000364839 107 ntBASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 MIR519E-201ENST00000385075 84 ntBASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 U3.27-201ENST00000391237 200 ntBASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 RNU7-74P-201ENST00000459104 62 ntBASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 RNU6-857P-201ENST00000515893 110 ntBASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 ACA64.5-201ENST00000516207 127 ntBASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 RNA5SP94-201ENST00000516917 108 ntBASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 MIR6828-201ENST00000636181 60 ntBASIC1.15□□□□□ -2.23
BRPF3Q9ULD4 RNU6-638P-201ENST00000516582 104 ntBASIC1.14□□□□□ -2.23
BRPF3Q9ULD4 MIR6767-201ENST00000637302 66 ntBASIC1.14□□□□□ -2.23
BRPF3Q9ULD4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
BRPF3Q9ULD4 MIR96-201ENST00000362288 78 ntBASIC1.13□□□□□ -2.23
BRPF3Q9ULD4 SNORA36.1-201ENST00000363424 132 ntBASIC1.13□□□□□ -2.23
BRPF3Q9ULD4 Y_RNA.264-201ENST00000364665 102 ntBASIC1.13□□□□□ -2.23
BRPF3Q9ULD4 SNORA36.2-201ENST00000384004 127 ntBASIC1.13□□□□□ -2.23
BRPF3Q9ULD4 RNU6-110P-201ENST00000384508 104 ntBASIC1.13□□□□□ -2.23
BRPF3Q9ULD4 RNA5SP227-201ENST00000516184 113 ntBASIC1.13□□□□□ -2.23
BRPF3Q9ULD4 MIRLET7A1-201ENST00000362295 80 ntBASIC1.12□□□□□ -2.23
BRPF3Q9ULD4 RNU6-24P-201ENST00000384440 107 ntBASIC1.12□□□□□ -2.23
BRPF3Q9ULD4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.12□□□□□ -2.23
BRPF3Q9ULD4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
BRPF3Q9ULD4 RNY1P8-201ENST00000383970 114 ntBASIC1.11□□□□□ -2.23
BRPF3Q9ULD4 SNORA24B-201ENST00000384176 131 ntBASIC1.11□□□□□ -2.23
BRPF3Q9ULD4 MIR146A-201ENST00000385201 99 ntBASIC1.11□□□□□ -2.23
BRPF3Q9ULD4 MIR216B-201ENST00000390186 82 ntBASIC1.11□□□□□ -2.23
BRPF3Q9ULD4 RNA5SP268-201ENST00000516828 124 ntBASIC1.11□□□□□ -2.23
BRPF3Q9ULD4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms