Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-681P-201ENST00000364012 104 ntBASIC1.48□□□□□ -2.17
CNTN3Q9P232 RNU6-939P-201ENST00000384634 107 ntBASIC1.48□□□□□ -2.17
CNTN3Q9P232 MIR451A-201ENST00000385059 72 ntBASIC1.48□□□□□ -2.17
CNTN3Q9P232 RNU6-321P-201ENST00000410912 106 ntBASIC1.48□□□□□ -2.17
CNTN3Q9P232 AC074348.1-201ENST00000426503 132 ntBASIC1.48□□□□□ -2.17
CNTN3Q9P232 MIR216B-201ENST00000390186 82 ntBASIC1.47□□□□□ -2.17
CNTN3Q9P232 RNU2-59P-201ENST00000410482 191 ntBASIC1.47□□□□□ -2.17
CNTN3Q9P232 AC097510.1-201ENST00000510945 133 ntBASIC1.47□□□□□ -2.17
CNTN3Q9P232 AC025627.3-201ENST00000582078 182 ntBASIC1.47□□□□□ -2.17
CNTN3Q9P232 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
CNTN3Q9P232 Y_RNA.565-201ENST00000384719 101 ntBASIC1.46□□□□□ -2.18
CNTN3Q9P232 SCARNA18B-201ENST00000458806 135 ntBASIC1.46□□□□□ -2.18
CNTN3Q9P232 RNU6-469P-201ENST00000516253 101 ntBASIC1.46□□□□□ -2.18
CNTN3Q9P232 MIR3140-201ENST00000583685 90 ntBASIC1.46□□□□□ -2.18
CNTN3Q9P232 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CNTN3Q9P232 RNU6-411P-201ENST00000384451 107 ntBASIC1.45□□□□□ -2.18
CNTN3Q9P232 MIR942-201ENST00000401111 86 ntBASIC1.45□□□□□ -2.18
CNTN3Q9P232 Y_RNA.606-201ENST00000410579 103 ntBASIC1.45□□□□□ -2.18
CNTN3Q9P232 RNU1-123P-201ENST00000458950 160 ntBASIC1.45□□□□□ -2.18
CNTN3Q9P232 AC004223.1-201ENST00000479840 271 ntBASIC1.45□□□□□ -2.18
CNTN3Q9P232 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.45□□□□□ -2.18
CNTN3Q9P232 Y_RNA.681-201ENST00000516445 113 ntBASIC1.45□□□□□ -2.18
CNTN3Q9P232 RNU7-161P-201ENST00000517289 62 ntBASIC1.45□□□□□ -2.18
CNTN3Q9P232 MIR3660-201ENST00000584845 100 ntBASIC1.45□□□□□ -2.18
CNTN3Q9P232 RNU1-124P-201ENST00000363861 145 ntBASIC1.44□□□□□ -2.18
CNTN3Q9P232 RNU6-340P-201ENST00000364005 107 ntBASIC1.44□□□□□ -2.18
CNTN3Q9P232 Y_RNA.532-201ENST00000384590 113 ntBASIC1.44□□□□□ -2.18
CNTN3Q9P232 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.44□□□□□ -2.18
CNTN3Q9P232 RNA5SP404-201ENST00000517118 132 ntBASIC1.44□□□□□ -2.18
CNTN3Q9P232 MIR3920-201ENST00000581751 86 ntBASIC1.44□□□□□ -2.18
CNTN3Q9P232 MIR4639-201ENST00000584938 69 ntBASIC1.44□□□□□ -2.18
CNTN3Q9P232 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
CNTN3Q9P232 AC067863.3-201ENST00000624172 122 ntBASIC1.44□□□□□ -2.18
CNTN3Q9P232 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CNTN3Q9P232 RNU6-1126P-201ENST00000384002 107 ntBASIC1.43□□□□□ -2.18
CNTN3Q9P232 SNORA24B-201ENST00000384176 131 ntBASIC1.43□□□□□ -2.18
CNTN3Q9P232 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CNTN3Q9P232 MIR2113-201ENST00000459007 91 ntBASIC1.43□□□□□ -2.18
CNTN3Q9P232 SNORD114-24-201ENST00000365029 72 ntBASIC1.42□□□□□ -2.18
CNTN3Q9P232 Y_RNA.327-201ENST00000365201 102 ntBASIC1.42□□□□□ -2.18
CNTN3Q9P232 SNORA40.6-201ENST00000391153 128 ntBASIC1.42□□□□□ -2.18
CNTN3Q9P232 RNU6-1052P-201ENST00000411398 104 ntBASIC1.42□□□□□ -2.18
CNTN3Q9P232 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
CNTN3Q9P232 RNU6-719P-201ENST00000516671 104 ntBASIC1.42□□□□□ -2.18
CNTN3Q9P232 MIR3134-201ENST00000579433 74 ntBASIC1.42□□□□□ -2.18
CNTN3Q9P232 MIR4484-201ENST00000582855 83 ntBASIC1.42□□□□□ -2.18
CNTN3Q9P232 Y_RNA.788-201ENST00000622394 112 ntBASIC1.42□□□□□ -2.18
CNTN3Q9P232 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
CNTN3Q9P232 Y_RNA.36-201ENST00000362602 112 ntBASIC1.41□□□□□ -2.18
CNTN3Q9P232 RNU6-392P-201ENST00000364926 101 ntBASIC1.41□□□□□ -2.18
CNTN3Q9P232 Y_RNA.371-201ENST00000365591 113 ntBASIC1.41□□□□□ -2.18
CNTN3Q9P232 MIR617-201ENST00000385030 97 ntBASIC1.41□□□□□ -2.18
CNTN3Q9P232 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
CNTN3Q9P232 RNU7-74P-201ENST00000459104 62 ntBASIC1.41□□□□□ -2.18
CNTN3Q9P232 RNU7-104P-201ENST00000459398 79 ntBASIC1.41□□□□□ -2.18
CNTN3Q9P232 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
CNTN3Q9P232 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.41□□□□□ -2.18
CNTN3Q9P232 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CNTN3Q9P232 MIR644A-201ENST00000385262 94 ntBASIC1.4□□□□□ -2.19
CNTN3Q9P232 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
CNTN3Q9P232 SNORD124-201ENST00000459577 104 ntBASIC1.4□□□□□ -2.19
CNTN3Q9P232 RNU6-70P-201ENST00000516438 60 ntBASIC1.4□□□□□ -2.19
CNTN3Q9P232 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.4□□□□□ -2.19
CNTN3Q9P232 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
CNTN3Q9P232 SNORD28-201ENST00000384706 75 ntBASIC1.39□□□□□ -2.19
CNTN3Q9P232 MIR573-201ENST00000384964 99 ntBASIC1.39□□□□□ -2.19
CNTN3Q9P232 RNU6-1177P-201ENST00000391058 104 ntBASIC1.39□□□□□ -2.19
CNTN3Q9P232 U6.81-201ENST00000612550 106 ntBASIC1.39□□□□□ -2.19
CNTN3Q9P232 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.39□□□□□ -2.19
CNTN3Q9P232 RNU6-871P-201ENST00000516122 100 ntBASIC1.38□□□□□ -2.19
CNTN3Q9P232 RNU6-523P-201ENST00000516304 54 ntBASIC1.38□□□□□ -2.19
CNTN3Q9P232 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.38□□□□□ -2.19
CNTN3Q9P232 AC244669.1-204ENST00000621564 178 ntBASIC1.38□□□□□ -2.19
CNTN3Q9P232 SNORA8.1-201ENST00000384250 140 ntBASIC1.37□□□□□ -2.19
CNTN3Q9P232 MIR548AG2-201ENST00000581228 64 ntBASIC1.37□□□□□ -2.19
CNTN3Q9P232 AC139453.2-201ENST00000487255 133 ntBASIC1.36□□□□□ -2.19
CNTN3Q9P232 RNU6-154P-201ENST00000384306 106 ntBASIC1.35□□□□□ -2.19
CNTN3Q9P232 SNORD41.1-201ENST00000391000 69 ntBASIC1.35□□□□□ -2.19
CNTN3Q9P232 RNA5SP255-201ENST00000516370 107 ntBASIC1.35□□□□□ -2.19
CNTN3Q9P232 MIR3612-201ENST00000579753 87 ntBASIC1.35□□□□□ -2.19
CNTN3Q9P232 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CNTN3Q9P232 Y_RNA.164-201ENST00000363709 102 ntBASIC1.34□□□□□ -2.19
CNTN3Q9P232 RNU6-824P-201ENST00000363724 104 ntBASIC1.34□□□□□ -2.19
CNTN3Q9P232 SNORD18A-201ENST00000363753 72 ntBASIC1.34□□□□□ -2.19
CNTN3Q9P232 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CNTN3Q9P232 Y_RNA.676-201ENST00000516393 96 ntBASIC1.34□□□□□ -2.19
CNTN3Q9P232 RNA5SP47-201ENST00000517230 109 ntBASIC1.34□□□□□ -2.19
CNTN3Q9P232 MIR3678-201ENST00000578455 94 ntBASIC1.34□□□□□ -2.19
CNTN3Q9P232 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
CNTN3Q9P232 MIR337-201ENST00000362281 93 ntBASIC1.33□□□□□ -2.2
CNTN3Q9P232 MIR519E-201ENST00000385075 84 ntBASIC1.33□□□□□ -2.2
CNTN3Q9P232 MIR548L-201ENST00000408303 86 ntBASIC1.33□□□□□ -2.2
CNTN3Q9P232 RNU6-752P-201ENST00000516376 102 ntBASIC1.33□□□□□ -2.2
CNTN3Q9P232 MIR3675-201ENST00000583661 73 ntBASIC1.33□□□□□ -2.2
CNTN3Q9P232 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CNTN3Q9P232 RNU4-45P-201ENST00000365469 141 ntBASIC1.32□□□□□ -2.2
CNTN3Q9P232 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CNTN3Q9P232 RNU6-587P-201ENST00000391282 106 ntBASIC1.32□□□□□ -2.2
CNTN3Q9P232 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.32□□□□□ -2.2
CNTN3Q9P232 RNU6-687P-201ENST00000516443 89 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms