Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.14□□□□□ -2.59
CCDC59Q9P031 AC130289.1-201ENST00000577321 73 ntBASIC-1.14□□□□□ -2.59
CCDC59Q9P031 SNORD114-15-201ENST00000364687 72 ntBASIC-1.15□□□□□ -2.59
CCDC59Q9P031 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.15□□□□□ -2.59
CCDC59Q9P031 SNORA20.1-201ENST00000364790 130 ntBASIC-1.15□□□□□ -2.59
CCDC59Q9P031 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.15□□□□□ -2.59
CCDC59Q9P031 MIR548D2-201ENST00000384955 97 ntBASIC-1.15□□□□□ -2.59
CCDC59Q9P031 MIR548E-201ENST00000408287 88 ntBASIC-1.15□□□□□ -2.59
CCDC59Q9P031 SCARNA17-201ENST00000516183 144 ntBASIC-1.15□□□□□ -2.59
CCDC59Q9P031 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.15□□□□□ -2.59
CCDC59Q9P031 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.15□□□□□ -2.59
CCDC59Q9P031 MTND5P18-201ENST00000445624 1801 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 RNU6-502P-201ENST00000362419 108 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 MIR451A-201ENST00000385059 72 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 MIR518B-201ENST00000385127 83 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 RN7SKP19-201ENST00000516016 252 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 MIR3179-1-201ENST00000578940 84 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 MIR3179-2-201ENST00000579107 84 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 MIR3179-3-201ENST00000579566 84 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 MIR3179-4-201ENST00000617599 84 ntBASIC-1.16□□□□□ -2.6
CCDC59Q9P031 SNORD114-4-201ENST00000363962 75 ntBASIC-1.17□□□□□ -2.6
CCDC59Q9P031 RNU6-915P-201ENST00000364943 103 ntBASIC-1.17□□□□□ -2.6
CCDC59Q9P031 MIR1263-201ENST00000408324 86 ntBASIC-1.17□□□□□ -2.6
CCDC59Q9P031 RNA5SP136-201ENST00000410906 107 ntBASIC-1.17□□□□□ -2.6
CCDC59Q9P031 AC097510.1-201ENST00000510945 133 ntBASIC-1.17□□□□□ -2.6
CCDC59Q9P031 MIR548AX-201ENST00000580117 73 ntBASIC-1.17□□□□□ -2.6
CCDC59Q9P031 AC062037.2-201ENST00000610137 73 ntBASIC-1.17□□□□□ -2.6
CCDC59Q9P031 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 RNU4-11P-201ENST00000365287 132 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 RNU6-409P-201ENST00000384114 104 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 RNU6-476P-201ENST00000384726 107 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 RNU6-460P-201ENST00000391158 108 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 MIR1302-3-201ENST00000408128 138 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 RNU6-721P-201ENST00000410155 105 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 MTCYBP9-201ENST00000431021 303 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.18□□□□□ -2.6
CCDC59Q9P031 MIR5704-201ENST00000584029 77 ntBASIC-1.18□□□□□ -2.6
CCDC59Q9P031 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.19□□□□□ -2.6
CCDC59Q9P031 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.19□□□□□ -2.6
CCDC59Q9P031 RNU7-197P-201ENST00000458836 62 ntBASIC-1.19□□□□□ -2.6
CCDC59Q9P031 AC072026.1-201ENST00000605023 201 ntBASIC-1.19□□□□□ -2.6
CCDC59Q9P031 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.2□□□□□ -2.6
CCDC59Q9P031 RNU4-36P-201ENST00000364294 144 ntBASIC-1.2□□□□□ -2.6
CCDC59Q9P031 RNU6-35P-201ENST00000384530 107 ntBASIC-1.2□□□□□ -2.6
CCDC59Q9P031 U3.27-201ENST00000391237 200 ntBASIC-1.2□□□□□ -2.6
CCDC59Q9P031 SNORD22.1-201ENST00000516331 125 ntBASIC-1.2□□□□□ -2.6
CCDC59Q9P031 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.2□□□□□ -2.6
CCDC59Q9P031 AL442128.1-201ENST00000615151 90 ntBASIC-1.2□□□□□ -2.6
CCDC59Q9P031 RNU6-647P-201ENST00000364243 107 ntBASIC-1.21□□□□□ -2.6
CCDC59Q9P031 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.21□□□□□ -2.6
CCDC59Q9P031 RNU6-738P-201ENST00000384531 106 ntBASIC-1.21□□□□□ -2.6
CCDC59Q9P031 MIR568-201ENST00000385036 95 ntBASIC-1.21□□□□□ -2.6
CCDC59Q9P031 MIR6854-201ENST00000614935 69 ntBASIC-1.21□□□□□ -2.6
CCDC59Q9P031 AC141273.2-201ENST00000618989 130 ntBASIC-1.21□□□□□ -2.6
CCDC59Q9P031 SNORD42B-201ENST00000458893 67 ntBASIC-1.22□□□□□ -2.6
CCDC59Q9P031 MIR6738-201ENST00000619620 64 ntBASIC-1.22□□□□□ -2.6
CCDC59Q9P031 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.23□□□□□ -2.61
CCDC59Q9P031 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.23□□□□□ -2.61
CCDC59Q9P031 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.23□□□□□ -2.61
CCDC59Q9P031 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.23□□□□□ -2.61
CCDC59Q9P031 RNU6-75P-201ENST00000515944 104 ntBASIC-1.23□□□□□ -2.61
CCDC59Q9P031 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 MIR4324-201ENST00000584846 72 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.24□□□□□ -2.61
CCDC59Q9P031 AC022137.1-201ENST00000483735 151 ntBASIC-1.25□□□□□ -2.61
CCDC59Q9P031 MIR8068-201ENST00000618032 68 ntBASIC-1.25□□□□□ -2.61
CCDC59Q9P031 snoR1.1-201ENST00000628177 80 ntBASIC-1.25□□□□□ -2.61
CCDC59Q9P031 SNORA63-201ENST00000363450 132 ntBASIC-1.26□□□□□ -2.61
CCDC59Q9P031 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.26□□□□□ -2.61
CCDC59Q9P031 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.26□□□□□ -2.61
CCDC59Q9P031 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.26□□□□□ -2.61
CCDC59Q9P031 MIR517B-201ENST00000385102 67 ntBASIC-1.26□□□□□ -2.61
CCDC59Q9P031 AP000533.3-201ENST00000447704 118 ntBASIC-1.26□□□□□ -2.61
CCDC59Q9P031 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.27□□□□□ -2.61
CCDC59Q9P031 RNU6-151P-201ENST00000364158 107 ntBASIC-1.27□□□□□ -2.61
CCDC59Q9P031 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.27□□□□□ -2.61
CCDC59Q9P031 RNU6-816P-201ENST00000390914 107 ntBASIC-1.27□□□□□ -2.61
CCDC59Q9P031 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.27□□□□□ -2.61
CCDC59Q9P031 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.27□□□□□ -2.61
CCDC59Q9P031 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.27□□□□□ -2.61
CCDC59Q9P031 RNU6-65P-201ENST00000516332 98 ntBASIC-1.27□□□□□ -2.61
CCDC59Q9P031 RNU6-719P-201ENST00000516671 104 ntBASIC-1.27□□□□□ -2.61
CCDC59Q9P031 RNY4P6-201ENST00000363667 96 ntBASIC-1.28□□□□□ -2.61
CCDC59Q9P031 SNORD74.6-201ENST00000364796 70 ntBASIC-1.28□□□□□ -2.61
CCDC59Q9P031 RNY4P3-201ENST00000365254 95 ntBASIC-1.28□□□□□ -2.61
CCDC59Q9P031 RNU6-10P-201ENST00000384036 107 ntBASIC-1.28□□□□□ -2.61
CCDC59Q9P031 FGF7P7-201ENST00000514120 227 ntBASIC-1.28□□□□□ -2.61
CCDC59Q9P031 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.28□□□□□ -2.61
CCDC59Q9P031 MIR6773-201ENST00000612812 74 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 1751.7 ms