Protein–RNA interactions for Protein: Q9NZ43

USE1, Vesicle transport protein USE1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USE1Q9NZ43 SNORD115-17-201ENST00000364612 82 ntBASIC-2.29□□□□□ -2.78
USE1Q9NZ43 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.29□□□□□ -2.78
USE1Q9NZ43 AL445584.3-201ENST00000617173 78 ntBASIC-2.29□□□□□ -2.78
USE1Q9NZ43 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.3□□□□□ -2.78
USE1Q9NZ43 SNORA26.4-201ENST00000391188 123 ntBASIC-2.3□□□□□ -2.78
USE1Q9NZ43 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.3□□□□□ -2.78
USE1Q9NZ43 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.3□□□□□ -2.78
USE1Q9NZ43 MIR6888-201ENST00000621977 67 ntBASIC-2.3□□□□□ -2.78
USE1Q9NZ43 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.31□□□□□ -2.78
USE1Q9NZ43 RNU6-647P-201ENST00000364243 107 ntBASIC-2.31□□□□□ -2.78
USE1Q9NZ43 RNU6-768P-201ENST00000384683 107 ntBASIC-2.31□□□□□ -2.78
USE1Q9NZ43 MIR1207-201ENST00000408249 87 ntBASIC-2.31□□□□□ -2.78
USE1Q9NZ43 RNU2-51P-201ENST00000410708 197 ntBASIC-2.31□□□□□ -2.78
USE1Q9NZ43 AC091912.2-201ENST00000624798 167 ntBASIC-2.31□□□□□ -2.78
USE1Q9NZ43 AL512310.12-203ENST00000640543 90 ntBASIC-2.31□□□□□ -2.78
USE1Q9NZ43 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.32□□□□□ -2.78
USE1Q9NZ43 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.32□□□□□ -2.78
USE1Q9NZ43 RNU6-719P-201ENST00000516671 104 ntBASIC-2.32□□□□□ -2.78
USE1Q9NZ43 AL137067.1-201ENST00000615933 120 ntBASIC-2.32□□□□□ -2.78
USE1Q9NZ43 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.32□□□□□ -2.78
USE1Q9NZ43 MIR1255B1-201ENST00000636325 63 ntBASIC-2.32□□□□□ -2.78
USE1Q9NZ43 RNU6-508P-201ENST00000363231 103 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 SNORD38.1-201ENST00000363863 68 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 SNORA7.5-201ENST00000410672 110 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.33□□□□□ -2.78
USE1Q9NZ43 AC107027.2-201ENST00000512197 115 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 RNY3P16-201ENST00000516338 101 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 U6.96-201ENST00000636425 70 ntBASIC-2.33□□□□□ -2.78
USE1Q9NZ43 FGF7P7-201ENST00000514120 227 ntBASIC-2.34□□□□□ -2.78
USE1Q9NZ43 RNA5SP26-201ENST00000362406 119 ntBASIC-2.35□□□□□ -2.79
USE1Q9NZ43 RNU6-924P-201ENST00000362926 108 ntBASIC-2.35□□□□□ -2.79
USE1Q9NZ43 RNU6-164P-201ENST00000364604 103 ntBASIC-2.35□□□□□ -2.79
USE1Q9NZ43 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.35□□□□□ -2.79
USE1Q9NZ43 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.36□□□□□ -2.79
USE1Q9NZ43 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.36□□□□□ -2.79
USE1Q9NZ43 SNORD18B-201ENST00000365659 72 ntBASIC-2.36□□□□□ -2.79
USE1Q9NZ43 RNU6-493P-201ENST00000391321 108 ntBASIC-2.36□□□□□ -2.79
USE1Q9NZ43 Z83846.1-201ENST00000446798 265 ntBASIC-2.36□□□□□ -2.79
USE1Q9NZ43 MIR6874-201ENST00000635894 71 ntBASIC-2.36□□□□□ -2.79
USE1Q9NZ43 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.37□□□□□ -2.79
USE1Q9NZ43 MIR548H3-201ENST00000408771 118 ntBASIC-2.37□□□□□ -2.79
USE1Q9NZ43 MIR3163-201ENST00000581592 73 ntBASIC-2.37□□□□□ -2.79
USE1Q9NZ43 AC021753.1-201ENST00000635724 168 ntBASIC-2.37□□□□□ -2.79
USE1Q9NZ43 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.38□□□□□ -2.79
USE1Q9NZ43 RNU6-309P-201ENST00000364573 106 ntBASIC-2.38□□□□□ -2.79
USE1Q9NZ43 RNU6-275P-201ENST00000364910 107 ntBASIC-2.38□□□□□ -2.79
USE1Q9NZ43 RNY3P1-201ENST00000365085 102 ntBASIC-2.38□□□□□ -2.79
USE1Q9NZ43 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.38□□□□□ -2.79
USE1Q9NZ43 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.39□□□□□ -2.79
USE1Q9NZ43 MT-TI-201ENST00000387365 69 ntBASIC-2.39□□□□□ -2.79
USE1Q9NZ43 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.4□□□□□ -2.79
USE1Q9NZ43 RNU6-990P-201ENST00000364385 104 ntBASIC-2.4□□□□□ -2.79
USE1Q9NZ43 SNORD116-4-201ENST00000384733 96 ntBASIC-2.4□□□□□ -2.79
USE1Q9NZ43 SNORA75.5-201ENST00000391291 81 ntBASIC-2.4□□□□□ -2.79
USE1Q9NZ43 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.4□□□□□ -2.79
USE1Q9NZ43 RNU6-75P-201ENST00000515944 104 ntBASIC-2.4□□□□□ -2.79
USE1Q9NZ43 AC108081.1-201ENST00000604358 221 ntBASIC-2.4□□□□□ -2.79
USE1Q9NZ43 RNY4P27-201ENST00000363341 96 ntBASIC-2.41□□□□□ -2.8
USE1Q9NZ43 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.41□□□□□ -2.8
USE1Q9NZ43 AC090617.8-201ENST00000623339 167 ntBASIC-2.41□□□□□ -2.8
USE1Q9NZ43 RNU6-495P-201ENST00000362995 107 ntBASIC-2.42□□□□□ -2.8
USE1Q9NZ43 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.42□□□□□ -2.8
USE1Q9NZ43 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.42□□□□□ -2.8
USE1Q9NZ43 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.42□□□□□ -2.8
USE1Q9NZ43 AL078595.1-201ENST00000404458 226 ntBASIC-2.42□□□□□ -2.8
USE1Q9NZ43 RNU6-412P-201ENST00000516434 106 ntBASIC-2.42□□□□□ -2.8
USE1Q9NZ43 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.42□□□□□ -2.8
USE1Q9NZ43 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.42□□□□□ -2.8
USE1Q9NZ43 MIR3149-201ENST00000584629 83 ntBASIC-2.42□□□□□ -2.8
USE1Q9NZ43 MIR369-201ENST00000362155 70 ntBASIC-2.43□□□□□ -2.8
USE1Q9NZ43 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.43□□□□□ -2.8
USE1Q9NZ43 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.43□□□□□ -2.8
USE1Q9NZ43 SNORA2.1-201ENST00000363089 137 ntBASIC-2.43□□□□□ -2.8
USE1Q9NZ43 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.43□□□□□ -2.8
USE1Q9NZ43 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.43□□□□□ -2.8
USE1Q9NZ43 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.43□□□□□ -2.8
USE1Q9NZ43 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.43□□□□□ -2.8
USE1Q9NZ43 SNORD115-22-201ENST00000364456 82 ntBASIC-2.44□□□□□ -2.8
USE1Q9NZ43 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.44□□□□□ -2.8
USE1Q9NZ43 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.44□□□□□ -2.8
USE1Q9NZ43 AC113195.1-201ENST00000579952 141 ntBASIC-2.44□□□□□ -2.8
USE1Q9NZ43 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.45□□□□□ -2.8
USE1Q9NZ43 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.45□□□□□ -2.8
USE1Q9NZ43 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.45□□□□□ -2.8
USE1Q9NZ43 MIR548H1-201ENST00000408610 102 ntBASIC-2.45□□□□□ -2.8
USE1Q9NZ43 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.45□□□□□ -2.8
USE1Q9NZ43 RNU6-65P-201ENST00000516332 98 ntBASIC-2.45□□□□□ -2.8
USE1Q9NZ43 MIR4643-201ENST00000577473 78 ntBASIC-2.45□□□□□ -2.8
USE1Q9NZ43 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.46□□□□□ -2.8
USE1Q9NZ43 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.46□□□□□ -2.8
USE1Q9NZ43 MIR507-201ENST00000385234 94 ntBASIC-2.46□□□□□ -2.8
USE1Q9NZ43 RNA5SP86-201ENST00000390869 98 ntBASIC-2.46□□□□□ -2.8
USE1Q9NZ43 AL353691.2-201ENST00000443795 59 ntBASIC-2.46□□□□□ -2.8
USE1Q9NZ43 MTND1P19-201ENST00000511780 315 ntBASIC-2.46□□□□□ -2.8
USE1Q9NZ43 U6.106-201ENST00000636360 105 ntBASIC-2.46□□□□□ -2.8
USE1Q9NZ43 MIR6844-201ENST00000637122 62 ntBASIC-2.46□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 1618.7 ms