Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 FGF7P7-201ENST00000514120 227 ntBASIC1.43□□□□□ -2.18
TMEM39AQ9NV64 RNU6-1108P-201ENST00000516308 104 ntBASIC1.43□□□□□ -2.18
TMEM39AQ9NV64 RNU6-557P-201ENST00000516842 110 ntBASIC1.43□□□□□ -2.18
TMEM39AQ9NV64 MTRNR2L2-201ENST00000604882 87 ntBASIC1.43□□□□□ -2.18
TMEM39AQ9NV64 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
TMEM39AQ9NV64 RNA5SP117-201ENST00000365294 118 ntBASIC1.42□□□□□ -2.18
TMEM39AQ9NV64 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.42□□□□□ -2.18
TMEM39AQ9NV64 AC002350.1-201ENST00000490759 375 ntBASIC1.42□□□□□ -2.18
TMEM39AQ9NV64 MIR151B-201ENST00000584249 96 ntBASIC1.42□□□□□ -2.18
TMEM39AQ9NV64 MIR6788-201ENST00000618842 66 ntBASIC1.42□□□□□ -2.18
TMEM39AQ9NV64 Y_RNA.36-201ENST00000362602 112 ntBASIC1.41□□□□□ -2.18
TMEM39AQ9NV64 SNORD115-24-201ENST00000363528 82 ntBASIC1.41□□□□□ -2.18
TMEM39AQ9NV64 RNU6-686P-201ENST00000364839 107 ntBASIC1.41□□□□□ -2.18
TMEM39AQ9NV64 MIR598-201ENST00000384868 97 ntBASIC1.41□□□□□ -2.18
TMEM39AQ9NV64 MIR200A-201ENST00000384875 90 ntBASIC1.41□□□□□ -2.18
TMEM39AQ9NV64 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
TMEM39AQ9NV64 SNORD77.2-201ENST00000391045 68 ntBASIC1.4□□□□□ -2.19
TMEM39AQ9NV64 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.4□□□□□ -2.19
TMEM39AQ9NV64 MIR548J-201ENST00000408833 112 ntBASIC1.4□□□□□ -2.19
TMEM39AQ9NV64 Y_RNA.660-201ENST00000516002 120 ntBASIC1.4□□□□□ -2.19
TMEM39AQ9NV64 RNU6-1094P-201ENST00000362416 104 ntBASIC1.39□□□□□ -2.19
TMEM39AQ9NV64 SNORA25.8-201ENST00000364831 128 ntBASIC1.39□□□□□ -2.19
TMEM39AQ9NV64 RNU6-1051P-201ENST00000365471 102 ntBASIC1.39□□□□□ -2.19
TMEM39AQ9NV64 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
TMEM39AQ9NV64 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.39□□□□□ -2.19
TMEM39AQ9NV64 MIR4662A-201ENST00000637499 67 ntBASIC1.39□□□□□ -2.19
TMEM39AQ9NV64 MIRLET7A1-201ENST00000362295 80 ntBASIC1.38□□□□□ -2.19
TMEM39AQ9NV64 Y_RNA.207-201ENST00000364142 106 ntBASIC1.38□□□□□ -2.19
TMEM39AQ9NV64 MIR644A-201ENST00000385262 94 ntBASIC1.38□□□□□ -2.19
TMEM39AQ9NV64 RNU6-935P-201ENST00000410371 100 ntBASIC1.38□□□□□ -2.19
TMEM39AQ9NV64 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
TMEM39AQ9NV64 RNU6-208P-201ENST00000362431 107 ntBASIC1.37□□□□□ -2.19
TMEM39AQ9NV64 RNA5SP403-201ENST00000363598 108 ntBASIC1.37□□□□□ -2.19
TMEM39AQ9NV64 RNY4P3-201ENST00000365254 95 ntBASIC1.37□□□□□ -2.19
TMEM39AQ9NV64 RNU6-380P-201ENST00000410207 107 ntBASIC1.37□□□□□ -2.19
TMEM39AQ9NV64 RNU7-13P-201ENST00000516413 62 ntBASIC1.37□□□□□ -2.19
TMEM39AQ9NV64 RNA5SP404-201ENST00000517118 132 ntBASIC1.37□□□□□ -2.19
TMEM39AQ9NV64 RNU5F-1-201ENST00000362507 117 ntBASIC1.36□□□□□ -2.19
TMEM39AQ9NV64 Y_RNA.264-201ENST00000364665 102 ntBASIC1.36□□□□□ -2.19
TMEM39AQ9NV64 SNORD115-44-201ENST00000365391 82 ntBASIC1.36□□□□□ -2.19
TMEM39AQ9NV64 RNU6-287P-201ENST00000516230 98 ntBASIC1.36□□□□□ -2.19
TMEM39AQ9NV64 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
TMEM39AQ9NV64 RNU7-161P-201ENST00000517289 62 ntBASIC1.36□□□□□ -2.19
TMEM39AQ9NV64 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.36□□□□□ -2.19
TMEM39AQ9NV64 MIR6767-201ENST00000637302 66 ntBASIC1.36□□□□□ -2.19
TMEM39AQ9NV64 RNU1-124P-201ENST00000363861 145 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 RNU6-776P-201ENST00000364403 104 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 SNORD114-24-201ENST00000365029 72 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 RNU6-1022P-201ENST00000365049 104 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 RNU6-1335P-201ENST00000365426 107 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 MIR451A-201ENST00000385059 72 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 snoU13.17-201ENST00000458802 104 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 RNU7-104P-201ENST00000459398 79 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 RNU6-469P-201ENST00000516253 101 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 RNU6-1057P-201ENST00000517162 102 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 MIR3140-201ENST00000583685 90 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 MIR4295-201ENST00000585286 85 ntBASIC1.35□□□□□ -2.19
TMEM39AQ9NV64 AC087343.1-201ENST00000477341 475 ntBASIC1.34□□□□□ -2.19
TMEM39AQ9NV64 AC025627.3-201ENST00000582078 182 ntBASIC1.34□□□□□ -2.19
TMEM39AQ9NV64 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.34□□□□□ -2.19
TMEM39AQ9NV64 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
TMEM39AQ9NV64 RNU6-1296P-201ENST00000383879 107 ntBASIC1.33□□□□□ -2.2
TMEM39AQ9NV64 MIR573-201ENST00000384964 99 ntBASIC1.33□□□□□ -2.2
TMEM39AQ9NV64 MIR889-201ENST00000401280 79 ntBASIC1.33□□□□□ -2.2
TMEM39AQ9NV64 RNU6-1052P-201ENST00000411398 104 ntBASIC1.33□□□□□ -2.2
TMEM39AQ9NV64 RNU6-719P-201ENST00000516671 104 ntBASIC1.33□□□□□ -2.2
TMEM39AQ9NV64 RNU6-135P-201ENST00000516769 101 ntBASIC1.33□□□□□ -2.2
TMEM39AQ9NV64 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TMEM39AQ9NV64 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
TMEM39AQ9NV64 MIR3612-201ENST00000579753 87 ntBASIC1.32□□□□□ -2.2
TMEM39AQ9NV64 AC145423.2-201ENST00000610631 239 ntBASIC1.32□□□□□ -2.2
TMEM39AQ9NV64 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
TMEM39AQ9NV64 Y_RNA.205-201ENST00000364128 113 ntBASIC1.31□□□□□ -2.2
TMEM39AQ9NV64 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
TMEM39AQ9NV64 RNA5SP255-201ENST00000516370 107 ntBASIC1.31□□□□□ -2.2
TMEM39AQ9NV64 MIR3920-201ENST00000581751 86 ntBASIC1.31□□□□□ -2.2
TMEM39AQ9NV64 U7.4-201ENST00000614961 63 ntBASIC1.31□□□□□ -2.2
TMEM39AQ9NV64 AC067863.3-201ENST00000624172 122 ntBASIC1.31□□□□□ -2.2
TMEM39AQ9NV64 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
TMEM39AQ9NV64 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
TMEM39AQ9NV64 Y_RNA.12-201ENST00000362393 112 ntBASIC1.3□□□□□ -2.2
TMEM39AQ9NV64 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
TMEM39AQ9NV64 MIR2113-201ENST00000459007 91 ntBASIC1.3□□□□□ -2.2
TMEM39AQ9NV64 MIR4639-201ENST00000584938 69 ntBASIC1.3□□□□□ -2.2
TMEM39AQ9NV64 AC244669.1-204ENST00000621564 178 ntBASIC1.3□□□□□ -2.2
TMEM39AQ9NV64 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.3□□□□□ -2.2
TMEM39AQ9NV64 RNU6-1126P-201ENST00000384002 107 ntBASIC1.29□□□□□ -2.2
TMEM39AQ9NV64 SNORD28-201ENST00000384706 75 ntBASIC1.29□□□□□ -2.2
TMEM39AQ9NV64 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
TMEM39AQ9NV64 RNA5SP436-201ENST00000516020 115 ntBASIC1.29□□□□□ -2.2
TMEM39AQ9NV64 RNU6-1229P-201ENST00000364295 107 ntBASIC1.28□□□□□ -2.2
TMEM39AQ9NV64 MIR3678-201ENST00000578455 94 ntBASIC1.28□□□□□ -2.2
TMEM39AQ9NV64 YWHAEP2-201ENST00000580066 112 ntBASIC1.28□□□□□ -2.2
TMEM39AQ9NV64 MIR548AG2-201ENST00000581228 64 ntBASIC1.28□□□□□ -2.2
TMEM39AQ9NV64 YWHAEP3-201ENST00000582767 121 ntBASIC1.28□□□□□ -2.2
TMEM39AQ9NV64 SNORD18A-201ENST00000363753 72 ntBASIC1.27□□□□□ -2.21
TMEM39AQ9NV64 U3.27-201ENST00000391237 200 ntBASIC1.27□□□□□ -2.21
TMEM39AQ9NV64 MIR4484-201ENST00000582855 83 ntBASIC1.27□□□□□ -2.21
TMEM39AQ9NV64 Y_RNA.371-201ENST00000365591 113 ntBASIC1.26□□□□□ -2.21
TMEM39AQ9NV64 Y_RNA.532-201ENST00000384590 113 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 206.6 ms