Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 Y_RNA.32-201ENST00000362589 110 ntBASIC1.32□□□□□ -2.2
PDLIM7Q9NR12 RNU6-315P-201ENST00000362666 107 ntBASIC1.32□□□□□ -2.2
PDLIM7Q9NR12 SNORD90-201ENST00000391145 111 ntBASIC1.32□□□□□ -2.2
PDLIM7Q9NR12 AC244505.6-201ENST00000452829 130 ntBASIC1.32□□□□□ -2.2
PDLIM7Q9NR12 SNORA31.14-201ENST00000516728 116 ntBASIC1.32□□□□□ -2.2
PDLIM7Q9NR12 MIR4696-201ENST00000581431 70 ntBASIC1.32□□□□□ -2.2
PDLIM7Q9NR12 RNU6-664P-201ENST00000362381 107 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 RNU6-161P-201ENST00000363051 106 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 Y_RNA.239-201ENST00000364444 113 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 SNORD101-201ENST00000384027 73 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 MIR520H-201ENST00000385126 88 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 SNORD89-201ENST00000390981 114 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 RNU6-1108P-201ENST00000516308 104 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 uc_338.16-201ENST00000621804 95 ntBASIC1.31□□□□□ -2.2
PDLIM7Q9NR12 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PDLIM7Q9NR12 Y_RNA.374-201ENST00000365606 101 ntBASIC1.3□□□□□ -2.2
PDLIM7Q9NR12 MIR19B1-201ENST00000384829 87 ntBASIC1.3□□□□□ -2.2
PDLIM7Q9NR12 RNU6-1265P-201ENST00000516342 103 ntBASIC1.3□□□□□ -2.2
PDLIM7Q9NR12 RNU6-557P-201ENST00000516842 110 ntBASIC1.3□□□□□ -2.2
PDLIM7Q9NR12 MIR4295-201ENST00000585286 85 ntBASIC1.3□□□□□ -2.2
PDLIM7Q9NR12 MIR200A-201ENST00000384875 90 ntBASIC1.29□□□□□ -2.2
PDLIM7Q9NR12 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.29□□□□□ -2.2
PDLIM7Q9NR12 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
PDLIM7Q9NR12 Y_RNA.174-201ENST00000363781 105 ntBASIC1.28□□□□□ -2.2
PDLIM7Q9NR12 RNU6-686P-201ENST00000364839 107 ntBASIC1.28□□□□□ -2.2
PDLIM7Q9NR12 Y_RNA.596-201ENST00000410462 109 ntBASIC1.28□□□□□ -2.2
PDLIM7Q9NR12 FGF7P7-201ENST00000514120 227 ntBASIC1.28□□□□□ -2.2
PDLIM7Q9NR12 MTRNR2L2-201ENST00000604882 87 ntBASIC1.28□□□□□ -2.2
PDLIM7Q9NR12 MIR4662A-201ENST00000637499 67 ntBASIC1.28□□□□□ -2.2
PDLIM7Q9NR12 MIRLET7A1-201ENST00000362295 80 ntBASIC1.27□□□□□ -2.21
PDLIM7Q9NR12 MIR889-201ENST00000401280 79 ntBASIC1.27□□□□□ -2.21
PDLIM7Q9NR12 RNU6-1110P-201ENST00000516462 101 ntBASIC1.27□□□□□ -2.21
PDLIM7Q9NR12 MIR5000-201ENST00000577717 103 ntBASIC1.27□□□□□ -2.21
PDLIM7Q9NR12 AL136317.1-201ENST00000612653 226 ntBASIC1.27□□□□□ -2.21
PDLIM7Q9NR12 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.27□□□□□ -2.21
PDLIM7Q9NR12 RNU6-1094P-201ENST00000362416 104 ntBASIC1.26□□□□□ -2.21
PDLIM7Q9NR12 SNORD115-24-201ENST00000363528 82 ntBASIC1.26□□□□□ -2.21
PDLIM7Q9NR12 RNU6-776P-201ENST00000364403 104 ntBASIC1.26□□□□□ -2.21
PDLIM7Q9NR12 RNU6-1022P-201ENST00000365049 104 ntBASIC1.26□□□□□ -2.21
PDLIM7Q9NR12 RNU6-1051P-201ENST00000365471 102 ntBASIC1.26□□□□□ -2.21
PDLIM7Q9NR12 SNORD77.2-201ENST00000391045 68 ntBASIC1.26□□□□□ -2.21
PDLIM7Q9NR12 FABP5P4-201ENST00000437203 171 ntBASIC1.26□□□□□ -2.21
PDLIM7Q9NR12 SNORD124-201ENST00000459577 104 ntBASIC1.26□□□□□ -2.21
PDLIM7Q9NR12 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PDLIM7Q9NR12 MIR373-201ENST00000362273 69 ntBASIC1.25□□□□□ -2.21
PDLIM7Q9NR12 SNORD105-201ENST00000386910 85 ntBASIC1.25□□□□□ -2.21
PDLIM7Q9NR12 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.25□□□□□ -2.21
PDLIM7Q9NR12 U7.7-201ENST00000459276 60 ntBASIC1.25□□□□□ -2.21
PDLIM7Q9NR12 AC002350.1-201ENST00000490759 375 ntBASIC1.25□□□□□ -2.21
PDLIM7Q9NR12 Y_RNA.660-201ENST00000516002 120 ntBASIC1.25□□□□□ -2.21
PDLIM7Q9NR12 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.25□□□□□ -2.21
PDLIM7Q9NR12 RNU6-208P-201ENST00000362431 107 ntBASIC1.24□□□□□ -2.21
PDLIM7Q9NR12 Y_RNA.207-201ENST00000364142 106 ntBASIC1.24□□□□□ -2.21
PDLIM7Q9NR12 SNORD114-24-201ENST00000365029 72 ntBASIC1.24□□□□□ -2.21
PDLIM7Q9NR12 RNA5SP117-201ENST00000365294 118 ntBASIC1.24□□□□□ -2.21
PDLIM7Q9NR12 RNU6-1296P-201ENST00000383879 107 ntBASIC1.24□□□□□ -2.21
PDLIM7Q9NR12 MIR942-201ENST00000401111 86 ntBASIC1.24□□□□□ -2.21
PDLIM7Q9NR12 snoU13.17-201ENST00000458802 104 ntBASIC1.24□□□□□ -2.21
PDLIM7Q9NR12 RN7SL793P-201ENST00000583259 296 ntBASIC1.24□□□□□ -2.21
PDLIM7Q9NR12 MIR3140-201ENST00000583685 90 ntBASIC1.24□□□□□ -2.21
PDLIM7Q9NR12 MIR644A-201ENST00000385262 94 ntBASIC1.23□□□□□ -2.21
PDLIM7Q9NR12 RNU6-935P-201ENST00000410371 100 ntBASIC1.23□□□□□ -2.21
PDLIM7Q9NR12 AC211469.2-201ENST00000605461 205 ntBASIC1.23□□□□□ -2.21
PDLIM7Q9NR12 RNA5SP403-201ENST00000363598 108 ntBASIC1.22□□□□□ -2.21
PDLIM7Q9NR12 Y_RNA.264-201ENST00000364665 102 ntBASIC1.22□□□□□ -2.21
PDLIM7Q9NR12 RNU6-380P-201ENST00000410207 107 ntBASIC1.22□□□□□ -2.21
PDLIM7Q9NR12 RNU6-287P-201ENST00000516230 98 ntBASIC1.22□□□□□ -2.21
PDLIM7Q9NR12 RNU7-13P-201ENST00000516413 62 ntBASIC1.22□□□□□ -2.21
PDLIM7Q9NR12 RNU7-161P-201ENST00000517289 62 ntBASIC1.22□□□□□ -2.21
PDLIM7Q9NR12 AC145423.2-201ENST00000610631 239 ntBASIC1.22□□□□□ -2.21
PDLIM7Q9NR12 RNU5F-1-201ENST00000362507 117 ntBASIC1.21□□□□□ -2.22
PDLIM7Q9NR12 RNU6-1229P-201ENST00000364295 107 ntBASIC1.21□□□□□ -2.22
PDLIM7Q9NR12 RNY4P3-201ENST00000365254 95 ntBASIC1.21□□□□□ -2.22
PDLIM7Q9NR12 RNU6-1335P-201ENST00000365426 107 ntBASIC1.21□□□□□ -2.22
PDLIM7Q9NR12 MIR451A-201ENST00000385059 72 ntBASIC1.21□□□□□ -2.22
PDLIM7Q9NR12 RNU6-1052P-201ENST00000411398 104 ntBASIC1.21□□□□□ -2.22
PDLIM7Q9NR12 RNU6-719P-201ENST00000516671 104 ntBASIC1.21□□□□□ -2.22
PDLIM7Q9NR12 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
PDLIM7Q9NR12 SNORD115-44-201ENST00000365391 82 ntBASIC1.2□□□□□ -2.22
PDLIM7Q9NR12 RNU7-104P-201ENST00000459398 79 ntBASIC1.2□□□□□ -2.22
PDLIM7Q9NR12 RNU6-1057P-201ENST00000517162 102 ntBASIC1.2□□□□□ -2.22
PDLIM7Q9NR12 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.2□□□□□ -2.22
PDLIM7Q9NR12 U7.4-201ENST00000614961 63 ntBASIC1.2□□□□□ -2.22
PDLIM7Q9NR12 Y_RNA.532-201ENST00000384590 113 ntBASIC1.19□□□□□ -2.22
PDLIM7Q9NR12 MIR4484-201ENST00000582855 83 ntBASIC1.19□□□□□ -2.22
PDLIM7Q9NR12 Y_RNA.788-201ENST00000622394 112 ntBASIC1.19□□□□□ -2.22
PDLIM7Q9NR12 Y_RNA.12-201ENST00000362393 112 ntBASIC1.18□□□□□ -2.22
PDLIM7Q9NR12 MIR216A-201ENST00000385063 110 ntBASIC1.18□□□□□ -2.22
PDLIM7Q9NR12 SCARNA18B-201ENST00000458806 135 ntBASIC1.18□□□□□ -2.22
PDLIM7Q9NR12 CYP3A137P-201ENST00000562436 69 ntBASIC1.18□□□□□ -2.22
PDLIM7Q9NR12 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
PDLIM7Q9NR12 MIR2113-201ENST00000459007 91 ntBASIC1.17□□□□□ -2.22
PDLIM7Q9NR12 RNU6-469P-201ENST00000516253 101 ntBASIC1.17□□□□□ -2.22
PDLIM7Q9NR12 MIR548AG2-201ENST00000581228 64 ntBASIC1.17□□□□□ -2.22
PDLIM7Q9NR12 MIR3920-201ENST00000581751 86 ntBASIC1.17□□□□□ -2.22
PDLIM7Q9NR12 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
PDLIM7Q9NR12 RNU6-1126P-201ENST00000384002 107 ntBASIC1.16□□□□□ -2.22
PDLIM7Q9NR12 MIR573-201ENST00000384964 99 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms