Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RNU6-972P-201ENST00000391208 107 ntBASIC0.45□□□□□ -2.34
SLC52A3Q9NQ40 SNORA40.8-201ENST00000411034 126 ntBASIC0.45□□□□□ -2.34
SLC52A3Q9NQ40 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.45□□□□□ -2.34
SLC52A3Q9NQ40 MIR1273G-201ENST00000577677 100 ntBASIC0.45□□□□□ -2.34
SLC52A3Q9NQ40 Y_RNA.96-201ENST00000363092 109 ntBASIC0.44□□□□□ -2.34
SLC52A3Q9NQ40 RNU6-640P-201ENST00000363693 105 ntBASIC0.44□□□□□ -2.34
SLC52A3Q9NQ40 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
SLC52A3Q9NQ40 RNA5SP227-201ENST00000516184 113 ntBASIC0.44□□□□□ -2.34
SLC52A3Q9NQ40 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
SLC52A3Q9NQ40 MIR3920-201ENST00000581751 86 ntBASIC0.44□□□□□ -2.34
SLC52A3Q9NQ40 MTRNR2L2-201ENST00000604882 87 ntBASIC0.44□□□□□ -2.34
SLC52A3Q9NQ40 U6.100-201ENST00000636230 99 ntBASIC0.44□□□□□ -2.34
SLC52A3Q9NQ40 RNU6-716P-201ENST00000365621 103 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 SNORD58A-201ENST00000383875 65 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 RNU6-1126P-201ENST00000384002 107 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 RNU6-466P-201ENST00000391224 103 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 RNU7-85P-201ENST00000458851 63 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 RNU6-75P-201ENST00000515944 104 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 AL162376.1-201ENST00000624117 175 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 AC067863.3-201ENST00000624172 122 ntBASIC0.43□□□□□ -2.34
SLC52A3Q9NQ40 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
SLC52A3Q9NQ40 RNU6-905P-201ENST00000384434 107 ntBASIC0.42□□□□□ -2.34
SLC52A3Q9NQ40 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
SLC52A3Q9NQ40 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
SLC52A3Q9NQ40 RNU7-13P-201ENST00000516413 62 ntBASIC0.42□□□□□ -2.34
SLC52A3Q9NQ40 MIR548AG2-201ENST00000581228 64 ntBASIC0.42□□□□□ -2.34
SLC52A3Q9NQ40 U7.3-201ENST00000616123 62 ntBASIC0.42□□□□□ -2.34
SLC52A3Q9NQ40 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SLC52A3Q9NQ40 SNORD116-10-201ENST00000363791 102 ntBASIC0.41□□□□□ -2.34
SLC52A3Q9NQ40 Y_RNA.290-201ENST00000364879 114 ntBASIC0.41□□□□□ -2.34
SLC52A3Q9NQ40 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
SLC52A3Q9NQ40 SNORD71-201ENST00000411292 86 ntBASIC0.41□□□□□ -2.34
SLC52A3Q9NQ40 RNU6-168P-201ENST00000516189 101 ntBASIC0.41□□□□□ -2.34
SLC52A3Q9NQ40 SNORA40.13-201ENST00000516379 120 ntBASIC0.41□□□□□ -2.34
SLC52A3Q9NQ40 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
SLC52A3Q9NQ40 MIR2052-201ENST00000636055 55 ntBASIC0.41□□□□□ -2.34
SLC52A3Q9NQ40 MIR924-201ENST00000638017 53 ntBASIC0.41□□□□□ -2.34
SLC52A3Q9NQ40 SNORD115-44-201ENST00000365391 82 ntBASIC0.4□□□□□ -2.35
SLC52A3Q9NQ40 RNA5SP89-201ENST00000410300 108 ntBASIC0.4□□□□□ -2.35
SLC52A3Q9NQ40 RNU1-29P-201ENST00000606574 126 ntBASIC0.4□□□□□ -2.35
SLC52A3Q9NQ40 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
SLC52A3Q9NQ40 MIR548L-201ENST00000408303 86 ntBASIC0.39□□□□□ -2.35
SLC52A3Q9NQ40 Y_RNA.596-201ENST00000410462 109 ntBASIC0.39□□□□□ -2.35
SLC52A3Q9NQ40 AC069271.1-201ENST00000445577 156 ntBASIC0.39□□□□□ -2.35
SLC52A3Q9NQ40 RNU6-162P-201ENST00000516228 103 ntBASIC0.39□□□□□ -2.35
SLC52A3Q9NQ40 MIR488-201ENST00000365739 83 ntBASIC0.38□□□□□ -2.35
SLC52A3Q9NQ40 RNU6-269P-201ENST00000391077 97 ntBASIC0.38□□□□□ -2.35
SLC52A3Q9NQ40 SNORD4B-201ENST00000459083 72 ntBASIC0.38□□□□□ -2.35
SLC52A3Q9NQ40 Y_RNA.677-201ENST00000516401 85 ntBASIC0.38□□□□□ -2.35
SLC52A3Q9NQ40 MALAT1.1-201ENST00000618249 95 ntBASIC0.38□□□□□ -2.35
SLC52A3Q9NQ40 SNORD44.1-201ENST00000363202 61 ntBASIC0.37□□□□□ -2.35
SLC52A3Q9NQ40 RNA5SP325-201ENST00000363756 130 ntBASIC0.37□□□□□ -2.35
SLC52A3Q9NQ40 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
SLC52A3Q9NQ40 RNU2-59P-201ENST00000410482 191 ntBASIC0.37□□□□□ -2.35
SLC52A3Q9NQ40 MIR2113-201ENST00000459007 91 ntBASIC0.37□□□□□ -2.35
SLC52A3Q9NQ40 MIR4696-201ENST00000581431 70 ntBASIC0.37□□□□□ -2.35
SLC52A3Q9NQ40 MIR6755-201ENST00000619993 66 ntBASIC0.37□□□□□ -2.35
SLC52A3Q9NQ40 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
SLC52A3Q9NQ40 RNU6-664P-201ENST00000362381 107 ntBASIC0.36□□□□□ -2.35
SLC52A3Q9NQ40 Y_RNA.190-201ENST00000363964 101 ntBASIC0.36□□□□□ -2.35
SLC52A3Q9NQ40 Y_RNA.207-201ENST00000364142 106 ntBASIC0.36□□□□□ -2.35
SLC52A3Q9NQ40 SNORD101-201ENST00000384027 73 ntBASIC0.36□□□□□ -2.35
SLC52A3Q9NQ40 MIR617-201ENST00000385030 97 ntBASIC0.36□□□□□ -2.35
SLC52A3Q9NQ40 MIR519E-201ENST00000385075 84 ntBASIC0.36□□□□□ -2.35
SLC52A3Q9NQ40 RNU6-287P-201ENST00000516230 98 ntBASIC0.36□□□□□ -2.35
SLC52A3Q9NQ40 MIR4752-201ENST00000579672 72 ntBASIC0.36□□□□□ -2.35
SLC52A3Q9NQ40 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
SLC52A3Q9NQ40 RNU6-132P-201ENST00000383863 107 ntBASIC0.35□□□□□ -2.35
SLC52A3Q9NQ40 RNU6-519P-201ENST00000410590 108 ntBASIC0.35□□□□□ -2.35
SLC52A3Q9NQ40 AC093423.1-201ENST00000440817 142 ntBASIC0.35□□□□□ -2.35
SLC52A3Q9NQ40 RNU6-65P-201ENST00000516332 98 ntBASIC0.35□□□□□ -2.35
SLC52A3Q9NQ40 AC026421.1-201ENST00000519101 163 ntBASIC0.35□□□□□ -2.35
SLC52A3Q9NQ40 MIR4536-1-201ENST00000583537 88 ntBASIC0.35□□□□□ -2.35
SLC52A3Q9NQ40 RNU7-74P-201ENST00000459104 62 ntBASIC0.34□□□□□ -2.36
SLC52A3Q9NQ40 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
SLC52A3Q9NQ40 SNORA70.25-201ENST00000612741 95 ntBASIC0.34□□□□□ -2.36
SLC52A3Q9NQ40 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.34□□□□□ -2.36
SLC52A3Q9NQ40 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.34□□□□□ -2.36
SLC52A3Q9NQ40 MIR330-201ENST00000362196 94 ntBASIC0.33□□□□□ -2.36
SLC52A3Q9NQ40 MIRLET7F1-201ENST00000362202 87 ntBASIC0.33□□□□□ -2.36
SLC52A3Q9NQ40 Y_RNA.609-201ENST00000410669 89 ntBASIC0.33□□□□□ -2.36
SLC52A3Q9NQ40 RNA5SP484-201ENST00000458857 111 ntBASIC0.33□□□□□ -2.36
SLC52A3Q9NQ40 MIR3064-201ENST00000581130 66 ntBASIC0.33□□□□□ -2.36
SLC52A3Q9NQ40 MIR8087-201ENST00000612745 78 ntBASIC0.33□□□□□ -2.36
SLC52A3Q9NQ40 AC073869.9-201ENST00000641610 120 ntBASIC0.33□□□□□ -2.36
SLC52A3Q9NQ40 RNA5SP457-201ENST00000363657 124 ntBASIC0.32□□□□□ -2.36
SLC52A3Q9NQ40 RNU6-935P-201ENST00000410371 100 ntBASIC0.32□□□□□ -2.36
SLC52A3Q9NQ40 RNU6-509P-201ENST00000363519 107 ntBASIC0.31□□□□□ -2.36
SLC52A3Q9NQ40 RNU1-141P-201ENST00000364623 158 ntBASIC0.31□□□□□ -2.36
SLC52A3Q9NQ40 RNU6-848P-201ENST00000515948 107 ntBASIC0.31□□□□□ -2.36
SLC52A3Q9NQ40 RNU6-617P-201ENST00000516147 107 ntBASIC0.31□□□□□ -2.36
SLC52A3Q9NQ40 RNU6-473P-201ENST00000516164 107 ntBASIC0.31□□□□□ -2.36
SLC52A3Q9NQ40 RNU6-1049P-201ENST00000516414 107 ntBASIC0.31□□□□□ -2.36
SLC52A3Q9NQ40 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
SLC52A3Q9NQ40 AC104996.3-201ENST00000590718 94 ntBASIC0.31□□□□□ -2.36
SLC52A3Q9NQ40 Y_RNA.239-201ENST00000364444 113 ntBASIC0.3□□□□□ -2.36
SLC52A3Q9NQ40 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 286.7 ms