Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.107-201ENST00000363190 121 ntBASIC0.3□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.283-201ENST00000364798 112 ntBASIC0.3□□□□□ -2.36
SIX2Q9NPC8 RNU6-644P-201ENST00000391155 98 ntBASIC0.3□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.596-201ENST00000410462 109 ntBASIC0.3□□□□□ -2.36
SIX2Q9NPC8 RNU6-109P-201ENST00000516364 107 ntBASIC0.3□□□□□ -2.36
SIX2Q9NPC8 RNU6-184P-201ENST00000516514 107 ntBASIC0.3□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.705-201ENST00000516862 110 ntBASIC0.3□□□□□ -2.36
SIX2Q9NPC8 RNU1-29P-201ENST00000606574 126 ntBASIC0.3□□□□□ -2.36
SIX2Q9NPC8 MIR450A1-201ENST00000362262 91 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 SNORA63.4-201ENST00000362763 126 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.93-201ENST00000363066 109 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.96-201ENST00000363092 109 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 AL035461.1-201ENST00000421490 332 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 MIR548AG2-201ENST00000581228 64 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 AC010487.4-201ENST00000637027 61 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 AC073869.9-201ENST00000641610 120 ntBASIC0.29□□□□□ -2.36
SIX2Q9NPC8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNY1P4-201ENST00000384595 115 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 Y_RNA.544-201ENST00000384650 113 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNU6-972P-201ENST00000391208 107 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNU6-887P-201ENST00000410660 100 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNU7-74P-201ENST00000459104 62 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNU6-848P-201ENST00000515948 107 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNU6-617P-201ENST00000516147 107 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNU6-473P-201ENST00000516164 107 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.28□□□□□ -2.36
SIX2Q9NPC8 RNU6-509P-201ENST00000363519 107 ntBASIC0.27□□□□□ -2.37
SIX2Q9NPC8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
SIX2Q9NPC8 MIR617-201ENST00000385030 97 ntBASIC0.27□□□□□ -2.37
SIX2Q9NPC8 MIR519E-201ENST00000385075 84 ntBASIC0.27□□□□□ -2.37
SIX2Q9NPC8 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
SIX2Q9NPC8 RNU7-61P-201ENST00000515897 61 ntBASIC0.27□□□□□ -2.37
SIX2Q9NPC8 RNU6-75P-201ENST00000515944 104 ntBASIC0.27□□□□□ -2.37
SIX2Q9NPC8 RNU6-287P-201ENST00000516230 98 ntBASIC0.27□□□□□ -2.37
SIX2Q9NPC8 RNA5SP62-201ENST00000363457 110 ntBASIC0.26□□□□□ -2.37
SIX2Q9NPC8 SNORD58A-201ENST00000383875 65 ntBASIC0.26□□□□□ -2.37
SIX2Q9NPC8 RNU6-44P-201ENST00000384045 107 ntBASIC0.26□□□□□ -2.37
SIX2Q9NPC8 RNU7-85P-201ENST00000458851 63 ntBASIC0.26□□□□□ -2.37
SIX2Q9NPC8 MIR2113-201ENST00000459007 91 ntBASIC0.26□□□□□ -2.37
SIX2Q9NPC8 RNU6-158P-201ENST00000517104 100 ntBASIC0.26□□□□□ -2.37
SIX2Q9NPC8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.26□□□□□ -2.37
SIX2Q9NPC8 SNORA70.25-201ENST00000612741 95 ntBASIC0.26□□□□□ -2.37
SIX2Q9NPC8 Y_RNA.207-201ENST00000364142 106 ntBASIC0.25□□□□□ -2.37
SIX2Q9NPC8 SNORA2A-201ENST00000383885 135 ntBASIC0.25□□□□□ -2.37
SIX2Q9NPC8 SNORD101-201ENST00000384027 73 ntBASIC0.25□□□□□ -2.37
SIX2Q9NPC8 MIR193B-201ENST00000384907 83 ntBASIC0.25□□□□□ -2.37
SIX2Q9NPC8 AC073261.1-201ENST00000429409 121 ntBASIC0.25□□□□□ -2.37
SIX2Q9NPC8 RNA5SP484-201ENST00000458857 111 ntBASIC0.25□□□□□ -2.37
SIX2Q9NPC8 MIR5706-201ENST00000579841 80 ntBASIC0.25□□□□□ -2.37
SIX2Q9NPC8 MIR4696-201ENST00000581431 70 ntBASIC0.25□□□□□ -2.37
SIX2Q9NPC8 RNU6-664P-201ENST00000362381 107 ntBASIC0.24□□□□□ -2.37
SIX2Q9NPC8 RNU6-815P-201ENST00000384080 113 ntBASIC0.24□□□□□ -2.37
SIX2Q9NPC8 MIR7-2-201ENST00000384970 110 ntBASIC0.24□□□□□ -2.37
SIX2Q9NPC8 MIR760-201ENST00000390220 80 ntBASIC0.24□□□□□ -2.37
SIX2Q9NPC8 RNU6-65P-201ENST00000516332 98 ntBASIC0.24□□□□□ -2.37
SIX2Q9NPC8 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
SIX2Q9NPC8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.24□□□□□ -2.37
SIX2Q9NPC8 SNORD116-10-201ENST00000363791 102 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 RNU1-141P-201ENST00000364623 158 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 RNU6-147P-201ENST00000383983 107 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 MTATP8P2-201ENST00000435212 202 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 AC093423.1-201ENST00000440817 142 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 RNU6-1232P-201ENST00000516299 86 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 NAMPTP3-201ENST00000569273 224 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 MIR4536-1-201ENST00000583537 88 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 MIR6779-201ENST00000617283 64 ntBASIC0.23□□□□□ -2.37
SIX2Q9NPC8 SNORA9.1-201ENST00000362412 131 ntBASIC0.22□□□□□ -2.37
SIX2Q9NPC8 RNU6-519P-201ENST00000410590 108 ntBASIC0.22□□□□□ -2.37
SIX2Q9NPC8 AC006210.1-201ENST00000424882 111 ntBASIC0.22□□□□□ -2.37
SIX2Q9NPC8 SNORD4B-201ENST00000459083 72 ntBASIC0.22□□□□□ -2.37
SIX2Q9NPC8 MIR1273G-201ENST00000577677 100 ntBASIC0.22□□□□□ -2.37
SIX2Q9NPC8 U7.3-201ENST00000616123 62 ntBASIC0.22□□□□□ -2.37
SIX2Q9NPC8 RNA5SP128-201ENST00000365305 116 ntBASIC0.21□□□□□ -2.38
SIX2Q9NPC8 RNU6-32P-201ENST00000383948 107 ntBASIC0.21□□□□□ -2.38
SIX2Q9NPC8 RNU6-13P-201ENST00000384248 107 ntBASIC0.21□□□□□ -2.38
SIX2Q9NPC8 RNU6-12P-201ENST00000384604 107 ntBASIC0.21□□□□□ -2.38
SIX2Q9NPC8 RNU6-41P-201ENST00000384741 107 ntBASIC0.21□□□□□ -2.38
SIX2Q9NPC8 SNORD110-201ENST00000408189 75 ntBASIC0.21□□□□□ -2.38
SIX2Q9NPC8 RNU6-935P-201ENST00000410371 100 ntBASIC0.21□□□□□ -2.38
SIX2Q9NPC8 AP001318.4-201ENST00000616637 121 ntBASIC0.21□□□□□ -2.38
SIX2Q9NPC8 MIR2052-201ENST00000636055 55 ntBASIC0.21□□□□□ -2.38
SIX2Q9NPC8 MIR501-201ENST00000390204 84 ntBASIC0.2□□□□□ -2.38
SIX2Q9NPC8 RNU7-129P-201ENST00000516128 62 ntBASIC0.2□□□□□ -2.38
SIX2Q9NPC8 U7.6-201ENST00000610841 64 ntBASIC0.2□□□□□ -2.38
SIX2Q9NPC8 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
SIX2Q9NPC8 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
SIX2Q9NPC8 MIR330-201ENST00000362196 94 ntBASIC0.19□□□□□ -2.38
SIX2Q9NPC8 MIRLET7F1-201ENST00000362202 87 ntBASIC0.19□□□□□ -2.38
SIX2Q9NPC8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.19□□□□□ -2.38
SIX2Q9NPC8 Y_RNA.239-201ENST00000364444 113 ntBASIC0.19□□□□□ -2.38
SIX2Q9NPC8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
SIX2Q9NPC8 RNU6-162P-201ENST00000516228 103 ntBASIC0.19□□□□□ -2.38
SIX2Q9NPC8 SNORA40.13-201ENST00000516379 120 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms