Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MIR942-201ENST00000401111 86 ntBASIC1.15□□□□□ -2.23
SEC61A2Q9H9S3 AC002350.1-201ENST00000490759 375 ntBASIC1.15□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-807P-201ENST00000516805 107 ntBASIC1.15□□□□□ -2.23
SEC61A2Q9H9S3 AC068338.1-201ENST00000565567 176 ntBASIC1.15□□□□□ -2.23
SEC61A2Q9H9S3 YWHAEP2-201ENST00000580066 112 ntBASIC1.15□□□□□ -2.23
SEC61A2Q9H9S3 YWHAEP3-201ENST00000582767 121 ntBASIC1.15□□□□□ -2.23
SEC61A2Q9H9S3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.15□□□□□ -2.23
SEC61A2Q9H9S3 SNORD105-201ENST00000386910 85 ntBASIC1.14□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-303P-201ENST00000517091 106 ntBASIC1.14□□□□□ -2.23
SEC61A2Q9H9S3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.14□□□□□ -2.23
SEC61A2Q9H9S3 MIR26B-201ENST00000362251 77 ntBASIC1.13□□□□□ -2.23
SEC61A2Q9H9S3 RNA5SP403-201ENST00000363598 108 ntBASIC1.13□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.13□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-70P-201ENST00000516438 60 ntBASIC1.13□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.13□□□□□ -2.23
SEC61A2Q9H9S3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.13□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-330P-201ENST00000363015 107 ntBASIC1.12□□□□□ -2.23
SEC61A2Q9H9S3 SNORA40.6-201ENST00000391153 128 ntBASIC1.12□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-321P-201ENST00000410912 106 ntBASIC1.12□□□□□ -2.23
SEC61A2Q9H9S3 MIR2113-201ENST00000459007 91 ntBASIC1.12□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-523P-201ENST00000516304 54 ntBASIC1.12□□□□□ -2.23
SEC61A2Q9H9S3 MIR548AG2-201ENST00000581228 64 ntBASIC1.12□□□□□ -2.23
SEC61A2Q9H9S3 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
SEC61A2Q9H9S3 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-340P-201ENST00000364005 107 ntBASIC1.11□□□□□ -2.23
SEC61A2Q9H9S3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SEC61A2Q9H9S3 FABP5P4-201ENST00000437203 171 ntBASIC1.11□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.11□□□□□ -2.23
SEC61A2Q9H9S3 MIR3920-201ENST00000581751 86 ntBASIC1.11□□□□□ -2.23
SEC61A2Q9H9S3 MIR1297-201ENST00000637311 77 ntBASIC1.11□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-824P-201ENST00000363724 104 ntBASIC1.1□□□□□ -2.23
SEC61A2Q9H9S3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.1□□□□□ -2.23
SEC61A2Q9H9S3 SNORD115-44-201ENST00000365391 82 ntBASIC1.1□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.1□□□□□ -2.23
SEC61A2Q9H9S3 SNORA24B-201ENST00000384176 131 ntBASIC1.1□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-411P-201ENST00000384451 107 ntBASIC1.1□□□□□ -2.23
SEC61A2Q9H9S3 AC074348.1-201ENST00000426503 132 ntBASIC1.1□□□□□ -2.23
SEC61A2Q9H9S3 U7.7-201ENST00000459276 60 ntBASIC1.1□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-469P-201ENST00000516253 101 ntBASIC1.1□□□□□ -2.23
SEC61A2Q9H9S3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 SNORA8.1-201ENST00000384250 140 ntBASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 RNU6-154P-201ENST00000384306 106 ntBASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 AC097510.1-201ENST00000510945 133 ntBASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 Y_RNA.681-201ENST00000516445 113 ntBASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 AC244669.1-204ENST00000621564 178 ntBASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 AC067863.3-201ENST00000624172 122 ntBASIC1.09□□□□□ -2.23
SEC61A2Q9H9S3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SEC61A2Q9H9S3 AC139453.2-201ENST00000487255 133 ntBASIC1.08□□□□□ -2.24
SEC61A2Q9H9S3 TRMT112P2-201ENST00000512910 132 ntBASIC1.08□□□□□ -2.24
SEC61A2Q9H9S3 RNU6-1015P-201ENST00000517121 99 ntBASIC1.08□□□□□ -2.24
SEC61A2Q9H9S3 MIR4773-1-201ENST00000637203 78 ntBASIC1.08□□□□□ -2.24
SEC61A2Q9H9S3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
SEC61A2Q9H9S3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.07□□□□□ -2.24
SEC61A2Q9H9S3 RNU6-1177P-201ENST00000391058 104 ntBASIC1.07□□□□□ -2.24
SEC61A2Q9H9S3 MIR548L-201ENST00000408303 86 ntBASIC1.07□□□□□ -2.24
SEC61A2Q9H9S3 MIR3612-201ENST00000579753 87 ntBASIC1.07□□□□□ -2.24
SEC61A2Q9H9S3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
SEC61A2Q9H9S3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SEC61A2Q9H9S3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.06□□□□□ -2.24
SEC61A2Q9H9S3 Y_RNA.258-201ENST00000364613 105 ntBASIC1.06□□□□□ -2.24
SEC61A2Q9H9S3 SNORA25.8-201ENST00000364831 128 ntBASIC1.06□□□□□ -2.24
SEC61A2Q9H9S3 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
SEC61A2Q9H9S3 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
SEC61A2Q9H9S3 AL078603.1-201ENST00000603824 313 ntBASIC1.06□□□□□ -2.24
SEC61A2Q9H9S3 SNORD18A-201ENST00000363753 72 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 RNU6-681P-201ENST00000364012 104 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 RNU6-716P-201ENST00000365621 103 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 SNORD28-201ENST00000384706 75 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 MIR573-201ENST00000384964 99 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 MIR519E-201ENST00000385075 84 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 RNU2-59P-201ENST00000410482 191 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 RNU6-687P-201ENST00000516443 89 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 MIR3678-201ENST00000578455 94 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 U6.81-201ENST00000612550 106 ntBASIC1.05□□□□□ -2.24
SEC61A2Q9H9S3 RNU6-382P-201ENST00000365181 106 ntBASIC1.04□□□□□ -2.24
SEC61A2Q9H9S3 MIR617-201ENST00000385030 97 ntBASIC1.04□□□□□ -2.24
SEC61A2Q9H9S3 U3.27-201ENST00000391237 200 ntBASIC1.04□□□□□ -2.24
SEC61A2Q9H9S3 Y_RNA.606-201ENST00000410579 103 ntBASIC1.04□□□□□ -2.24
SEC61A2Q9H9S3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
SEC61A2Q9H9S3 AC011195.1-201ENST00000578177 177 ntBASIC1.04□□□□□ -2.24
SEC61A2Q9H9S3 MIR4639-201ENST00000584938 69 ntBASIC1.04□□□□□ -2.24
SEC61A2Q9H9S3 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
SEC61A2Q9H9S3 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.04□□□□□ -2.24
SEC61A2Q9H9S3 MIR337-201ENST00000362281 93 ntBASIC1.03□□□□□ -2.24
SEC61A2Q9H9S3 RNU6-392P-201ENST00000364926 101 ntBASIC1.03□□□□□ -2.24
SEC61A2Q9H9S3 RNU6-587P-201ENST00000391282 106 ntBASIC1.03□□□□□ -2.24
SEC61A2Q9H9S3 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
SEC61A2Q9H9S3 SNORD99-201ENST00000408612 74 ntBASIC1.03□□□□□ -2.24
SEC61A2Q9H9S3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.25
SEC61A2Q9H9S3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
SEC61A2Q9H9S3 SNORD114-24-201ENST00000365029 72 ntBASIC1.02□□□□□ -2.25
SEC61A2Q9H9S3 RNU6-1241P-201ENST00000384536 107 ntBASIC1.02□□□□□ -2.25
SEC61A2Q9H9S3 MIR154-201ENST00000385243 84 ntBASIC1.02□□□□□ -2.25
SEC61A2Q9H9S3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.02□□□□□ -2.25
SEC61A2Q9H9S3 AC114801.3-201ENST00000510231 177 ntBASIC1.02□□□□□ -2.25
SEC61A2Q9H9S3 RNU6-135P-201ENST00000516769 101 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms