Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU7-129P-201ENST00000516128 62 ntBASIC0.17□□□□□ -2.38
USP44Q9H0E7 MIR6129-201ENST00000616087 109 ntBASIC0.17□□□□□ -2.38
USP44Q9H0E7 U6.100-201ENST00000636230 99 ntBASIC0.17□□□□□ -2.38
USP44Q9H0E7 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
USP44Q9H0E7 RNU6-509P-201ENST00000363519 107 ntBASIC0.16□□□□□ -2.38
USP44Q9H0E7 SNORD45B-201ENST00000364617 72 ntBASIC0.16□□□□□ -2.38
USP44Q9H0E7 RNA5SP484-201ENST00000458857 111 ntBASIC0.16□□□□□ -2.38
USP44Q9H0E7 RNU7-74P-201ENST00000459104 62 ntBASIC0.16□□□□□ -2.38
USP44Q9H0E7 snoU13.11-201ENST00000459219 104 ntBASIC0.16□□□□□ -2.38
USP44Q9H0E7 RNU6-313P-201ENST00000516317 112 ntBASIC0.16□□□□□ -2.38
USP44Q9H0E7 MIR4439-201ENST00000583746 80 ntBASIC0.16□□□□□ -2.38
USP44Q9H0E7 MIR499B-201ENST00000636498 73 ntBASIC0.16□□□□□ -2.38
USP44Q9H0E7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.15□□□□□ -2.39
USP44Q9H0E7 Y_RNA.95-201ENST00000363079 95 ntBASIC0.15□□□□□ -2.39
USP44Q9H0E7 MIR519E-201ENST00000385075 84 ntBASIC0.15□□□□□ -2.39
USP44Q9H0E7 RNU6-127P-201ENST00000390897 107 ntBASIC0.15□□□□□ -2.39
USP44Q9H0E7 RNU6-287P-201ENST00000516230 98 ntBASIC0.15□□□□□ -2.39
USP44Q9H0E7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.15□□□□□ -2.39
USP44Q9H0E7 NAMPTP3-201ENST00000569273 224 ntBASIC0.15□□□□□ -2.39
USP44Q9H0E7 AC025521.1-201ENST00000621624 286 ntBASIC0.15□□□□□ -2.39
USP44Q9H0E7 RNU6-834P-201ENST00000362367 110 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 RNU4-36P-201ENST00000364294 144 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 MIR617-201ENST00000385030 97 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 MIR501-201ENST00000390204 84 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 Y_RNA.596-201ENST00000410462 109 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 Y_RNA.601-201ENST00000410500 113 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 SNORA19.1-201ENST00000410656 129 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.14□□□□□ -2.39
USP44Q9H0E7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 MIR4743-201ENST00000584576 69 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 MIR548Z-201ENST00000584743 97 ntBASIC0.14□□□□□ -2.39
USP44Q9H0E7 Y_RNA.10-201ENST00000362371 110 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 RNU6-1056P-201ENST00000383996 107 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 Y_RNA.467-201ENST00000384297 102 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 MIR892B-201ENST00000401279 77 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 SNORD110-201ENST00000408189 75 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 RNU2-51P-201ENST00000410708 197 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 AC006210.1-201ENST00000424882 111 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 AL606753.1-201ENST00000427435 87 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 MIR2113-201ENST00000459007 91 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 MIR4777-201ENST00000583710 86 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 MTRNR2L2-201ENST00000604882 87 ntBASIC0.13□□□□□ -2.39
USP44Q9H0E7 RNU1-141P-201ENST00000364623 158 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 Y_RNA.283-201ENST00000364798 112 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 SNORA51.5-201ENST00000384126 131 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 RNU6-466P-201ENST00000391224 103 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 Y_RNA.660-201ENST00000516002 120 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 RNU6-904P-201ENST00000516206 101 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 RNU6-795P-201ENST00000516323 103 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 RNU6-589P-201ENST00000516485 107 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 AL513043.2-201ENST00000573941 143 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 AC012531.4-201ENST00000616509 177 ntBASIC0.12□□□□□ -2.39
USP44Q9H0E7 Y_RNA.207-201ENST00000364142 106 ntBASIC0.11□□□□□ -2.39
USP44Q9H0E7 RNU6-813P-201ENST00000384691 107 ntBASIC0.11□□□□□ -2.39
USP44Q9H0E7 AC093423.1-201ENST00000440817 142 ntBASIC0.11□□□□□ -2.39
USP44Q9H0E7 Y_RNA.648-201ENST00000459455 110 ntBASIC0.11□□□□□ -2.39
USP44Q9H0E7 MIR548AD-201ENST00000584780 82 ntBASIC0.11□□□□□ -2.39
USP44Q9H0E7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.11□□□□□ -2.39
USP44Q9H0E7 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
USP44Q9H0E7 MIR610-201ENST00000385139 96 ntBASIC0.1□□□□□ -2.39
USP44Q9H0E7 MIR643-201ENST00000385267 97 ntBASIC0.1□□□□□ -2.39
USP44Q9H0E7 HMGN2P22-201ENST00000427588 175 ntBASIC0.1□□□□□ -2.39
USP44Q9H0E7 RNU6-789P-201ENST00000517105 102 ntBASIC0.1□□□□□ -2.39
USP44Q9H0E7 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
USP44Q9H0E7 AC103810.7-201ENST00000607821 91 ntBASIC0.1□□□□□ -2.39
USP44Q9H0E7 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
USP44Q9H0E7 RNU6-106P-201ENST00000384405 107 ntBASIC0.09□□□□□ -2.4
USP44Q9H0E7 MIR1302-5-201ENST00000408164 150 ntBASIC0.09□□□□□ -2.4
USP44Q9H0E7 SCARNA23-201ENST00000516060 130 ntBASIC0.09□□□□□ -2.4
USP44Q9H0E7 RNU6-406P-201ENST00000516470 107 ntBASIC0.09□□□□□ -2.4
USP44Q9H0E7 RNU6-782P-201ENST00000516852 104 ntBASIC0.09□□□□□ -2.4
USP44Q9H0E7 MIR4696-201ENST00000581431 70 ntBASIC0.09□□□□□ -2.4
USP44Q9H0E7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.09□□□□□ -2.4
USP44Q9H0E7 RNU6-664P-201ENST00000362381 107 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 RNU6-652P-201ENST00000365488 107 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 SNORD101-201ENST00000384027 73 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 SNORA19-201ENST00000384737 128 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 RNU6-554P-201ENST00000410466 106 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 RNU4-61P-201ENST00000411243 107 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 RNU6-75P-201ENST00000515944 104 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 RNU6-537P-201ENST00000517277 103 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 MIR5190-201ENST00000581537 80 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 MIR4677-201ENST00000584153 80 ntBASIC0.08□□□□□ -2.4
USP44Q9H0E7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.07□□□□□ -2.4
USP44Q9H0E7 Y_RNA.433-201ENST00000384089 102 ntBASIC0.07□□□□□ -2.4
USP44Q9H0E7 MIR590-201ENST00000385008 97 ntBASIC0.07□□□□□ -2.4
USP44Q9H0E7 MIR548H2-201ENST00000408874 88 ntBASIC0.07□□□□□ -2.4
USP44Q9H0E7 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
USP44Q9H0E7 Y_RNA.273-201ENST00000364703 102 ntBASIC0.06□□□□□ -2.4
USP44Q9H0E7 RNU6-644P-201ENST00000391155 98 ntBASIC0.06□□□□□ -2.4
USP44Q9H0E7 RNU7-85P-201ENST00000458851 63 ntBASIC0.06□□□□□ -2.4
USP44Q9H0E7 Y_RNA.709-201ENST00000516952 92 ntBASIC0.06□□□□□ -2.4
USP44Q9H0E7 RNA5SP285-201ENST00000516619 119 ntBASIC0.05□□□□□ -2.4
USP44Q9H0E7 MIR3925-201ENST00000584674 77 ntBASIC0.05□□□□□ -2.4
USP44Q9H0E7 AC069503.3-201ENST00000618674 145 ntBASIC0.05□□□□□ -2.4
USP44Q9H0E7 SNORA25.13-201ENST00000516395 103 ntBASIC0.04□□□□□ -2.4
USP44Q9H0E7 MIR4460-201ENST00000577862 86 ntBASIC0.04□□□□□ -2.4
USP44Q9H0E7 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
USP44Q9H0E7 MIR4536-1-201ENST00000583537 88 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 242 ms