Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 AC027335.2-201ENST00000624030 375 ntBASIC2.41□□□□□ -2.02
NBPF3Q9H094 MIRLET7G-201ENST00000362280 84 ntBASIC2.4□□□□□ -2.03
NBPF3Q9H094 SNORA2.1-201ENST00000363089 137 ntBASIC2.4□□□□□ -2.03
NBPF3Q9H094 Y_RNA.355-201ENST00000365462 98 ntBASIC2.4□□□□□ -2.03
NBPF3Q9H094 RNU6V-201ENST00000384105 107 ntBASIC2.4□□□□□ -2.03
NBPF3Q9H094 MIR617-201ENST00000385030 97 ntBASIC2.4□□□□□ -2.03
NBPF3Q9H094 MIR519E-201ENST00000385075 84 ntBASIC2.4□□□□□ -2.03
NBPF3Q9H094 RNU6-165P-201ENST00000517170 99 ntBASIC2.4□□□□□ -2.03
NBPF3Q9H094 AL773524.1-201ENST00000614065 229 ntBASIC2.4□□□□□ -2.03
NBPF3Q9H094 uc_338.20-201ENST00000621563 178 ntBASIC2.4□□□□□ -2.03
NBPF3Q9H094 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NBPF3Q9H094 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
NBPF3Q9H094 RNU6-302P-201ENST00000365249 107 ntBASIC2.39□□□□□ -2.03
NBPF3Q9H094 Y_RNA.379-201ENST00000365653 102 ntBASIC2.39□□□□□ -2.03
NBPF3Q9H094 MIR630-201ENST00000384957 97 ntBASIC2.39□□□□□ -2.03
NBPF3Q9H094 MIR938-201ENST00000401216 83 ntBASIC2.39□□□□□ -2.03
NBPF3Q9H094 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.39□□□□□ -2.03
NBPF3Q9H094 RNU7-104P-201ENST00000459398 79 ntBASIC2.39□□□□□ -2.03
NBPF3Q9H094 SNORA31.14-201ENST00000516728 116 ntBASIC2.39□□□□□ -2.03
NBPF3Q9H094 ZNF355P-201ENST00000427301 3216 ntBASIC2.39□□□□□ -2.03
NBPF3Q9H094 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.39□□□□□ -2.03
NBPF3Q9H094 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NBPF3Q9H094 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NBPF3Q9H094 MIR378A-201ENST00000362177 66 ntBASIC2.38□□□□□ -2.03
NBPF3Q9H094 SNORA75.2-201ENST00000391138 150 ntBASIC2.38□□□□□ -2.03
NBPF3Q9H094 SNORA75.3-201ENST00000391231 150 ntBASIC2.38□□□□□ -2.03
NBPF3Q9H094 AC067940.1-201ENST00000458411 300 ntBASIC2.38□□□□□ -2.03
NBPF3Q9H094 AC025033.1-201ENST00000463883 194 ntBASIC2.38□□□□□ -2.03
NBPF3Q9H094 RNA5SP182-201ENST00000516064 82 ntBASIC2.38□□□□□ -2.03
NBPF3Q9H094 AC023827.1-201ENST00000569247 97 ntBASIC2.38□□□□□ -2.03
NBPF3Q9H094 MIR548C-201ENST00000384815 97 ntBASIC2.37□□□□□ -2.03
NBPF3Q9H094 MIR4299-201ENST00000577899 72 ntBASIC2.37□□□□□ -2.03
NBPF3Q9H094 MIR548AD-201ENST00000584780 82 ntBASIC2.37□□□□□ -2.03
NBPF3Q9H094 MIR8074-201ENST00000615081 81 ntBASIC2.37□□□□□ -2.03
NBPF3Q9H094 AL157834.3-201ENST00000615543 103 ntBASIC2.37□□□□□ -2.03
NBPF3Q9H094 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
NBPF3Q9H094 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
NBPF3Q9H094 MIR499A-201ENST00000384903 122 ntBASIC2.36□□□□□ -2.03
NBPF3Q9H094 RNU6-717P-201ENST00000459076 104 ntBASIC2.36□□□□□ -2.03
NBPF3Q9H094 SNORA17.3-201ENST00000391159 129 ntBASIC2.35□□□□□ -2.03
NBPF3Q9H094 RNU6-321P-201ENST00000410912 106 ntBASIC2.35□□□□□ -2.03
NBPF3Q9H094 AL157398.1-201ENST00000452981 186 ntBASIC2.35□□□□□ -2.03
NBPF3Q9H094 AL096840.1-201ENST00000603287 93 ntBASIC2.35□□□□□ -2.03
NBPF3Q9H094 uc_338.16-201ENST00000621804 95 ntBASIC2.35□□□□□ -2.03
NBPF3Q9H094 MIR6739-201ENST00000622461 75 ntBASIC2.35□□□□□ -2.03
NBPF3Q9H094 MIR676-201ENST00000390702 67 ntBASIC2.34□□□□□ -2.03
NBPF3Q9H094 RNU1-123P-201ENST00000458950 160 ntBASIC2.34□□□□□ -2.03
NBPF3Q9H094 AC048334.1-201ENST00000477975 159 ntBASIC2.34□□□□□ -2.03
NBPF3Q9H094 MIR4804-201ENST00000581683 73 ntBASIC2.34□□□□□ -2.03
NBPF3Q9H094 AC106800.4-201ENST00000614905 153 ntBASIC2.34□□□□□ -2.03
NBPF3Q9H094 MIR302D-201ENST00000362275 68 ntBASIC2.33□□□□□ -2.04
NBPF3Q9H094 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NBPF3Q9H094 RNU6-753P-201ENST00000363926 107 ntBASIC2.32□□□□□ -2.04
NBPF3Q9H094 SNORD111-201ENST00000408139 94 ntBASIC2.32□□□□□ -2.04
NBPF3Q9H094 AC003989.2-201ENST00000440224 169 ntBASIC2.32□□□□□ -2.04
NBPF3Q9H094 AC012493.3-201ENST00000604494 112 ntBASIC2.32□□□□□ -2.04
NBPF3Q9H094 MIR8070-201ENST00000616510 88 ntBASIC2.32□□□□□ -2.04
NBPF3Q9H094 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NBPF3Q9H094 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NBPF3Q9H094 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.31□□□□□ -2.04
NBPF3Q9H094 RNU1-119P-201ENST00000391122 165 ntBASIC2.3□□□□□ -2.04
NBPF3Q9H094 RNA5SP364-201ENST00000516938 78 ntBASIC2.3□□□□□ -2.04
NBPF3Q9H094 RNU6-902P-201ENST00000517212 91 ntBASIC2.3□□□□□ -2.04
NBPF3Q9H094 MIR4713-201ENST00000582691 75 ntBASIC2.3□□□□□ -2.04
NBPF3Q9H094 SNORD1A-201ENST00000364968 72 ntBASIC2.29□□□□□ -2.04
NBPF3Q9H094 RNU7-56P-201ENST00000458744 62 ntBASIC2.29□□□□□ -2.04
NBPF3Q9H094 MIR3937-201ENST00000580135 106 ntBASIC2.29□□□□□ -2.04
NBPF3Q9H094 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NBPF3Q9H094 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NBPF3Q9H094 Y_RNA.363-201ENST00000365529 113 ntBASIC2.28□□□□□ -2.04
NBPF3Q9H094 snoU13.13-201ENST00000458842 104 ntBASIC2.28□□□□□ -2.04
NBPF3Q9H094 AC079140.2-201ENST00000506193 142 ntBASIC2.28□□□□□ -2.04
NBPF3Q9H094 TRMT112P2-201ENST00000512910 132 ntBASIC2.28□□□□□ -2.04
NBPF3Q9H094 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NBPF3Q9H094 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.05
NBPF3Q9H094 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
NBPF3Q9H094 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
NBPF3Q9H094 RNU6-994P-201ENST00000410507 111 ntBASIC2.27□□□□□ -2.05
NBPF3Q9H094 HMGN2P19-201ENST00000425149 265 ntBASIC2.27□□□□□ -2.05
NBPF3Q9H094 snoU13.9-201ENST00000458927 103 ntBASIC2.27□□□□□ -2.05
NBPF3Q9H094 AL359821.1-201ENST00000605519 182 ntBASIC2.27□□□□□ -2.05
NBPF3Q9H094 AC067863.3-201ENST00000624172 122 ntBASIC2.27□□□□□ -2.05
NBPF3Q9H094 Y_RNA.174-201ENST00000363781 105 ntBASIC2.26□□□□□ -2.05
NBPF3Q9H094 MIR489-201ENST00000384923 84 ntBASIC2.26□□□□□ -2.05
NBPF3Q9H094 AC018659.1-201ENST00000551083 169 ntBASIC2.26□□□□□ -2.05
NBPF3Q9H094 AL136317.1-201ENST00000612653 226 ntBASIC2.26□□□□□ -2.05
NBPF3Q9H094 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NBPF3Q9H094 RNA5SP190-201ENST00000365222 118 ntBASIC2.25□□□□□ -2.05
NBPF3Q9H094 RNU6-1065P-201ENST00000384513 106 ntBASIC2.25□□□□□ -2.05
NBPF3Q9H094 MIR9-3-201ENST00000385084 90 ntBASIC2.25□□□□□ -2.05
NBPF3Q9H094 MIR100-201ENST00000385259 80 ntBASIC2.25□□□□□ -2.05
NBPF3Q9H094 SNORA31.2-201ENST00000516019 134 ntBASIC2.25□□□□□ -2.05
NBPF3Q9H094 AL512310.8-201ENST00000550183 120 ntBASIC2.25□□□□□ -2.05
NBPF3Q9H094 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NBPF3Q9H094 RNU6-1162P-201ENST00000384443 104 ntBASIC2.24□□□□□ -2.05
NBPF3Q9H094 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NBPF3Q9H094 SNORD113-2-201ENST00000391082 72 ntBASIC2.24□□□□□ -2.05
NBPF3Q9H094 MIR934-201ENST00000401241 83 ntBASIC2.24□□□□□ -2.05
NBPF3Q9H094 U4.4-201ENST00000620626 117 ntBASIC2.24□□□□□ -2.05
NBPF3Q9H094 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms