Protein–RNA interactions for Protein: Q9C0C4

SEMA4C, Semaphorin-4C, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4CQ9C0C4 RNA5SP404-201ENST00000517118 132 ntBASIC1.01□□□□□ -2.25
SEMA4CQ9C0C4 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
SEMA4CQ9C0C4 U6.100-201ENST00000636230 99 ntBASIC1.01□□□□□ -2.25
SEMA4CQ9C0C4 SNORD115-37-201ENST00000363768 82 ntBASIC1□□□□□ -2.25
SEMA4CQ9C0C4 MIR644A-201ENST00000385262 94 ntBASIC1□□□□□ -2.25
SEMA4CQ9C0C4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1□□□□□ -2.25
SEMA4CQ9C0C4 MIR1236-201ENST00000408340 102 ntBASIC1□□□□□ -2.25
SEMA4CQ9C0C4 SNORA18.5-201ENST00000516616 101 ntBASIC1□□□□□ -2.25
SEMA4CQ9C0C4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1□□□□□ -2.25
SEMA4CQ9C0C4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
SEMA4CQ9C0C4 Y_RNA.316-201ENST00000365118 111 ntBASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 AL450471.1-201ENST00000447509 127 ntBASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 SNORA25.13-201ENST00000516395 103 ntBASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 MIR3064-201ENST00000581130 66 ntBASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 RNU7-10P-201ENST00000607194 63 ntBASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 AL136317.1-201ENST00000612653 226 ntBASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 MIR3202-2-201ENST00000635980 79 ntBASIC0.99□□□□□ -2.25
SEMA4CQ9C0C4 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
SEMA4CQ9C0C4 Y_RNA.258-201ENST00000364613 105 ntBASIC0.98□□□□□ -2.25
SEMA4CQ9C0C4 SNORD12-201ENST00000391002 90 ntBASIC0.98□□□□□ -2.25
SEMA4CQ9C0C4 RNA5SP330-201ENST00000517096 96 ntBASIC0.98□□□□□ -2.25
SEMA4CQ9C0C4 AC138907.6-201ENST00000568401 126 ntBASIC0.98□□□□□ -2.25
SEMA4CQ9C0C4 AC138869.1-201ENST00000568623 124 ntBASIC0.98□□□□□ -2.25
SEMA4CQ9C0C4 MIR4666B-201ENST00000578142 81 ntBASIC0.98□□□□□ -2.25
SEMA4CQ9C0C4 MIR4796-201ENST00000580742 81 ntBASIC0.98□□□□□ -2.25
SEMA4CQ9C0C4 AC104996.3-201ENST00000590718 94 ntBASIC0.98□□□□□ -2.25
SEMA4CQ9C0C4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.97□□□□□ -2.25
SEMA4CQ9C0C4 Y_RNA.607-201ENST00000410597 98 ntBASIC0.97□□□□□ -2.25
SEMA4CQ9C0C4 AC140658.3-201ENST00000567603 271 ntBASIC0.97□□□□□ -2.25
SEMA4CQ9C0C4 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
SEMA4CQ9C0C4 uc_338.16-201ENST00000621804 95 ntBASIC0.97□□□□□ -2.25
SEMA4CQ9C0C4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SEMA4CQ9C0C4 Y_RNA.491-201ENST00000384417 107 ntBASIC0.96□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-1052P-201ENST00000411398 104 ntBASIC0.96□□□□□ -2.26
SEMA4CQ9C0C4 AC097635.1-201ENST00000450678 155 ntBASIC0.96□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-1108P-201ENST00000516308 104 ntBASIC0.96□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-719P-201ENST00000516671 104 ntBASIC0.96□□□□□ -2.26
SEMA4CQ9C0C4 MIR4714-201ENST00000580728 77 ntBASIC0.96□□□□□ -2.26
SEMA4CQ9C0C4 SNORD115-24-201ENST00000363528 82 ntBASIC0.95□□□□□ -2.26
SEMA4CQ9C0C4 SNORD105-201ENST00000386910 85 ntBASIC0.95□□□□□ -2.26
SEMA4CQ9C0C4 AL109933.3-201ENST00000619095 188 ntBASIC0.95□□□□□ -2.26
SEMA4CQ9C0C4 RNA5SP257-201ENST00000363023 116 ntBASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-161P-201ENST00000363051 106 ntBASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 SNORD101-201ENST00000384027 73 ntBASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 MIR889-201ENST00000401280 79 ntBASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 RNU7-104P-201ENST00000459398 79 ntBASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 Y_RNA.685-201ENST00000516532 108 ntBASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 MIR4696-201ENST00000581431 70 ntBASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 MIR3140-201ENST00000583685 90 ntBASIC0.94□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-478P-201ENST00000363904 110 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 RNA5SP117-201ENST00000365294 118 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 MIR519A1-201ENST00000385257 85 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 MIR548U-201ENST00000390728 81 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 AC002350.1-201ENST00000490759 375 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 FGF7P7-201ENST00000514120 227 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-857P-201ENST00000515893 110 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 RNA5SP121-201ENST00000516537 101 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 RNA5SP395-201ENST00000516567 118 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-638P-201ENST00000516582 104 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 MIR4698-201ENST00000577795 80 ntBASIC0.93□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-664P-201ENST00000362381 107 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 Y_RNA.94-201ENST00000363068 106 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 RNA5SP62-201ENST00000363457 110 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 Y_RNA.244-201ENST00000364484 109 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 MIR19B1-201ENST00000384829 87 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 FABP5P4-201ENST00000437203 171 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 RNU7-161P-201ENST00000517289 62 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 MIR924-201ENST00000638017 53 ntBASIC0.92□□□□□ -2.26
SEMA4CQ9C0C4 Y_RNA.239-201ENST00000364444 113 ntBASIC0.91□□□□□ -2.26
SEMA4CQ9C0C4 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
SEMA4CQ9C0C4 SNORD99-201ENST00000408612 74 ntBASIC0.91□□□□□ -2.26
SEMA4CQ9C0C4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.91□□□□□ -2.26
SEMA4CQ9C0C4 AC244505.6-201ENST00000452829 130 ntBASIC0.91□□□□□ -2.26
SEMA4CQ9C0C4 snoU13.17-201ENST00000458802 104 ntBASIC0.91□□□□□ -2.26
SEMA4CQ9C0C4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
SEMA4CQ9C0C4 AC011195.1-201ENST00000578177 177 ntBASIC0.91□□□□□ -2.26
SEMA4CQ9C0C4 MIR4712-201ENST00000583750 82 ntBASIC0.91□□□□□ -2.26
SEMA4CQ9C0C4 RNU6-129P-201ENST00000391022 107 ntBASIC0.9□□□□□ -2.27
SEMA4CQ9C0C4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.9□□□□□ -2.27
SEMA4CQ9C0C4 U7.7-201ENST00000459276 60 ntBASIC0.9□□□□□ -2.27
SEMA4CQ9C0C4 HAR1A.1-201ENST00000459583 118 ntBASIC0.9□□□□□ -2.27
SEMA4CQ9C0C4 RNU6-1265P-201ENST00000516342 103 ntBASIC0.9□□□□□ -2.27
SEMA4CQ9C0C4 MIR3612-201ENST00000579753 87 ntBASIC0.9□□□□□ -2.27
SEMA4CQ9C0C4 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
SEMA4CQ9C0C4 MIR6513-201ENST00000621188 64 ntBASIC0.9□□□□□ -2.27
SEMA4CQ9C0C4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.89□□□□□ -2.27
SEMA4CQ9C0C4 MIR936-201ENST00000401264 98 ntBASIC0.89□□□□□ -2.27
SEMA4CQ9C0C4 RNU6-287P-201ENST00000516230 98 ntBASIC0.89□□□□□ -2.27
SEMA4CQ9C0C4 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
SEMA4CQ9C0C4 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.89□□□□□ -2.27
SEMA4CQ9C0C4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
SEMA4CQ9C0C4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms