Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RNU6-901P-201ENST00000384593 106 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR627-201ENST00000384979 97 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR548H1-201ENST00000408610 102 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 Y_RNA.603-201ENST00000410571 108 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 SNX3P1X-201ENST00000414887 175 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 PRSS3P4-201ENST00000453323 162 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 RNU7-56P-201ENST00000458744 62 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 RNU7-40P-201ENST00000516397 64 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 DEFB122-202ENST00000569013 197 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 AC025627.2-201ENST00000576220 160 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR5685-201ENST00000579080 79 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 AC110741.2-201ENST00000605278 268 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR432-201ENST00000606207 94 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR8059-201ENST00000620427 81 ntBASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-4Q9BYR3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 SNORA5B-201ENST00000363786 132 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 RNA5SP399-201ENST00000364003 117 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 Y_RNA.338-201ENST00000365320 114 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 SNORA25B-201ENST00000365507 128 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 RNU6-1044P-201ENST00000384755 107 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR490-201ENST00000384865 128 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR200C-201ENST00000384980 68 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR34B-201ENST00000385076 84 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR644A-201ENST00000385262 94 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 SNORA48.8-201ENST00000391324 134 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 RNA5SP310-201ENST00000459084 116 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 Y_RNA.663-201ENST00000516043 101 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 RNA5SP208-201ENST00000516156 78 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 RNU6-469P-201ENST00000516253 101 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 SNORA70.18-201ENST00000516696 98 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 RNA5SP468-201ENST00000516782 93 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 RNU6-175P-201ENST00000516896 107 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 SCARNA11.3-201ENST00000517276 130 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 AC006064.5-201ENST00000541782 248 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR3200-201ENST00000580767 85 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR4472-2-201ENST00000582069 67 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR4769-201ENST00000584126 77 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR8069-1-201ENST00000616627 86 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 AL591424.2-201ENST00000617023 128 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 AC012314.7-201ENST00000619693 93 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 AL353770.2-201ENST00000620024 78 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR8069-2-201ENST00000621412 86 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR6132-201ENST00000622083 109 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 MIR492-201ENST00000638676 116 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 SCN1A-220ENST00000641603 12506 ntBASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
KRTAP4-4Q9BYR3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU1-15P-201ENST00000353977 144 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR409-201ENST00000362237 79 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-50P-201ENST00000362356 103 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-112P-201ENST00000363599 104 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORD18A-201ENST00000363753 72 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORD46.1-201ENST00000364139 104 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR483-201ENST00000385070 76 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR767-201ENST00000390228 109 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA26.4-201ENST00000391188 123 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP274-201ENST00000410484 108 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 HMGN2P22-201ENST00000427588 175 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 AC069285.2-201ENST00000440210 275 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 ABCF2P2-201ENST00000450549 296 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 U7.7-201ENST00000459276 60 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP103-201ENST00000459503 118 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 AC003982.1-202ENST00000469928 248 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RN7SL594P-201ENST00000470590 287 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 AC025518.1-201ENST00000479856 347 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 AC008834.1-201ENST00000511612 175 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 AC008413.1-201ENST00000511864 177 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 SCARNA17.1-201ENST00000516211 143 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 SCARNA17.2-201ENST00000516334 143 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU4-54P-201ENST00000516428 129 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-118P-201ENST00000516552 102 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-922P-201ENST00000516753 99 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU7-143P-201ENST00000516781 65 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 snoU83B.1-201ENST00000517136 88 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA31.21-201ENST00000517180 77 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR5684-201ENST00000585074 65 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 SCARNA17.4-201ENST00000614296 143 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms