Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC108081.1-201ENST00000604358 221 ntBASIC-0.78□□□□□ -2.53
SHANK3Q9BYB0 MIR1285-2-201ENST00000408311 88 ntBASIC-0.79□□□□□ -2.54
SHANK3Q9BYB0 AL117187.1-201ENST00000555482 181 ntBASIC-0.79□□□□□ -2.54
SHANK3Q9BYB0 MIR6854-201ENST00000614935 69 ntBASIC-0.79□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 MIR548F4-201ENST00000408515 105 ntBASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 MIR4696-201ENST00000581431 70 ntBASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 AC008737.2-201ENST00000599446 118 ntBASIC-0.8□□□□□ -2.54
SHANK3Q9BYB0 RNU6-502P-201ENST00000362419 108 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 MIR548G-201ENST00000408442 89 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 MTND2P23-201ENST00000422990 651 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 MIR3165-201ENST00000579874 75 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 AL442128.1-201ENST00000615151 90 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU4-36P-201ENST00000364294 144 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-738P-201ENST00000384531 106 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 MT-TI-201ENST00000387365 69 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 SNORD37.2-201ENST00000391075 66 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 AP001094.1-201ENST00000579805 193 ntBASIC-0.81□□□□□ -2.54
SHANK3Q9BYB0 RNU6-647P-201ENST00000364243 107 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 RNA5SP192-201ENST00000364404 120 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 RNU6-409P-201ENST00000384114 104 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 MIR606-201ENST00000384851 96 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 MIR1255B1-201ENST00000636325 63 ntBASIC-0.82□□□□□ -2.54
SHANK3Q9BYB0 MTND5P18-201ENST00000445624 1801 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 SNORD115-25-201ENST00000362619 82 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 RNY4P27-201ENST00000363341 96 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 SNORD38.3-201ENST00000516599 73 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR3179-1-201ENST00000578940 84 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR3179-2-201ENST00000579107 84 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR3179-3-201ENST00000579566 84 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR4324-201ENST00000584846 72 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 AC062037.2-201ENST00000610137 73 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 MIR3179-4-201ENST00000617599 84 ntBASIC-0.83□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 RNU6-973P-201ENST00000364690 107 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 RNU6-466P-201ENST00000391224 103 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 MIR1302-3-201ENST00000408128 138 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 AP002392.1-201ENST00000537692 208 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 MIR4536-1-201ENST00000583537 88 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 snoR1.1-201ENST00000628177 80 ntBASIC-0.84□□□□□ -2.54
SHANK3Q9BYB0 SNORA20.1-201ENST00000364790 130 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 AL445193.1-201ENST00000441183 141 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 MIR3128-201ENST00000581957 66 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 AC072026.1-201ENST00000605023 201 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.85□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 SNORA49-201ENST00000386157 136 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 MTATP8P1-201ENST00000467115 207 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 RNA5SP169-201ENST00000517268 117 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 MIR513C-201ENST00000401352 84 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 RNU6-935P-201ENST00000410371 100 ntBASIC-0.86□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 RNY4P7-201ENST00000364600 96 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 SNORD22.1-201ENST00000516331 125 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 AC145423.2-201ENST00000610631 239 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.87□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 RNU6-24P-201ENST00000384440 107 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 MIR548D2-201ENST00000384955 97 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 SNORA7.5-201ENST00000410672 110 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 AL161932.1-201ENST00000437408 146 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 AL117351.2-201ENST00000513571 157 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.88□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 MIR196A1-201ENST00000388006 70 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 MIR548E-201ENST00000408287 88 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 RNU6-86P-201ENST00000606534 107 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 RNU6-721P-201ENST00000410155 105 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 MTCYBP9-201ENST00000431021 303 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 RNU6-75P-201ENST00000515944 104 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms