Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SNORA19-201ENST00000384737 128 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 MIR519E-201ENST00000385075 84 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 MIR760-201ENST00000390220 80 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 RNA5SP484-201ENST00000458857 111 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 Y_RNA.659-201ENST00000515994 113 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 RNU6-287P-201ENST00000516230 98 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 RNU6-795P-201ENST00000516323 103 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 RNU6-479P-201ENST00000516348 105 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 RNU7-13P-201ENST00000516413 62 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 RNU6-62P-201ENST00000516526 102 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 RNU6-537P-201ENST00000517277 103 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 AC012531.4-201ENST00000616509 177 ntBASIC0.12□□□□□ -2.39
RSPO3Q9BXY4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 Y_RNA.78-201ENST00000362970 110 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-106P-201ENST00000384405 107 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 MIR501-201ENST00000390204 84 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-127P-201ENST00000390897 107 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 MIR548H2-201ENST00000408874 88 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 AC093423.1-201ENST00000440817 142 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-75P-201ENST00000515944 104 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-848P-201ENST00000515948 107 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-617P-201ENST00000516147 107 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-473P-201ENST00000516164 107 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-904P-201ENST00000516206 101 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-406P-201ENST00000516470 107 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 RNU6-589P-201ENST00000516485 107 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 NAMPTP3-201ENST00000569273 224 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 AC096720.1-201ENST00000604441 183 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.11□□□□□ -2.39
RSPO3Q9BXY4 SNORA9.1-201ENST00000362412 131 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 Y_RNA.95-201ENST00000363079 95 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 Y_RNA.207-201ENST00000364142 106 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 RNA5SP128-201ENST00000365305 116 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 Y_RNA.601-201ENST00000410500 113 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 HMGN2P22-201ENST00000427588 175 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 RNU6-313P-201ENST00000516317 112 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 AL513043.2-201ENST00000573941 143 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
RSPO3Q9BXY4 RNU1-141P-201ENST00000364623 158 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 Y_RNA.283-201ENST00000364798 112 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 SNORA51.5-201ENST00000384126 131 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 MIR590-201ENST00000385008 97 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 RNU6-554P-201ENST00000410466 106 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 RNU2-51P-201ENST00000410708 197 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 RNU7-85P-201ENST00000458851 63 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 MIR2113-201ENST00000459007 91 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 RNU6-412P-201ENST00000516434 106 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 MIR3925-201ENST00000584674 77 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 AC103810.7-201ENST00000607821 91 ntBASIC0.09□□□□□ -2.4
RSPO3Q9BXY4 RNU6-1125P-201ENST00000363601 107 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 SNORD114-9-201ENST00000364370 72 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 SNORD45B-201ENST00000364617 72 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 RNU6-1056P-201ENST00000383996 107 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 RNU6-480P-201ENST00000384332 107 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 RNU6-813P-201ENST00000384691 107 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 MIR617-201ENST00000385030 97 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 MIR643-201ENST00000385267 97 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 MIR1265-201ENST00000408444 86 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 Y_RNA.596-201ENST00000410462 109 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 RNU7-129P-201ENST00000516128 62 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 RNU6-109P-201ENST00000516364 107 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 RNU6-184P-201ENST00000516514 107 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 MIR5706-201ENST00000579841 80 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 MIR4696-201ENST00000581431 70 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
RSPO3Q9BXY4 RNU6-834P-201ENST00000362367 110 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 RNU6-1290P-201ENST00000362957 109 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 SNORD115-44-201ENST00000365391 82 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 SNORD110-201ENST00000408189 75 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 RNU4-61P-201ENST00000411243 107 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 Y_RNA.648-201ENST00000459455 110 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 SCARNA23-201ENST00000516060 130 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 Y_RNA.709-201ENST00000516952 92 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 MIR4439-201ENST00000583746 80 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 MIR4677-201ENST00000584153 80 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 MIR548AD-201ENST00000584780 82 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 AC104408.1-201ENST00000605241 170 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 AC073869.9-201ENST00000641610 120 ntBASIC0.07□□□□□ -2.4
RSPO3Q9BXY4 RNU6-664P-201ENST00000362381 107 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 RNU6-161P-201ENST00000363051 106 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 RNU6-509P-201ENST00000363519 107 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 RNU4-36P-201ENST00000364294 144 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 RNY4P18-201ENST00000391107 89 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 AC006210.1-201ENST00000424882 111 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 RNU6-789P-201ENST00000517105 102 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
RSPO3Q9BXY4 RNU6-1325P-201ENST00000364905 105 ntBASIC0.05□□□□□ -2.4
RSPO3Q9BXY4 SNORD101-201ENST00000384027 73 ntBASIC0.05□□□□□ -2.4
RSPO3Q9BXY4 RNU6-644P-201ENST00000391155 98 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 230.4 ms