Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNU1-29P-201ENST00000606574 126 ntBASIC0.31□□□□□ -2.36
NPAS1Q99742 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
NPAS1Q99742 AL162376.1-201ENST00000624117 175 ntBASIC0.31□□□□□ -2.36
NPAS1Q99742 AC073869.9-201ENST00000641610 120 ntBASIC0.31□□□□□ -2.36
NPAS1Q99742 SNORD114-23-201ENST00000363536 72 ntBASIC0.3□□□□□ -2.36
NPAS1Q99742 RNY4P18-201ENST00000391107 89 ntBASIC0.3□□□□□ -2.36
NPAS1Q99742 Y_RNA.648-201ENST00000459455 110 ntBASIC0.3□□□□□ -2.36
NPAS1Q99742 MIR4536-1-201ENST00000583537 88 ntBASIC0.3□□□□□ -2.36
NPAS1Q99742 U6.100-201ENST00000636230 99 ntBASIC0.3□□□□□ -2.36
NPAS1Q99742 SNORA9.1-201ENST00000362412 131 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 Y_RNA.283-201ENST00000364798 112 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 MIR193B-201ENST00000384907 83 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 RNU6-644P-201ENST00000391155 98 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 AC006210.1-201ENST00000424882 111 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 RNU6-287P-201ENST00000516230 98 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 RNU6-109P-201ENST00000516364 107 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 RNU6-184P-201ENST00000516514 107 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 MIR5706-201ENST00000579841 80 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 MIR7111-201ENST00000619751 72 ntBASIC0.29□□□□□ -2.36
NPAS1Q99742 RNU6-766P-201ENST00000362478 107 ntBASIC0.28□□□□□ -2.36
NPAS1Q99742 Y_RNA.107-201ENST00000363190 121 ntBASIC0.28□□□□□ -2.36
NPAS1Q99742 SNORD101-201ENST00000384027 73 ntBASIC0.28□□□□□ -2.36
NPAS1Q99742 RNU6-972P-201ENST00000391208 107 ntBASIC0.28□□□□□ -2.36
NPAS1Q99742 RNU6-919P-201ENST00000516731 104 ntBASIC0.28□□□□□ -2.36
NPAS1Q99742 NAMPTP3-201ENST00000569273 224 ntBASIC0.28□□□□□ -2.36
NPAS1Q99742 U7.6-201ENST00000610841 64 ntBASIC0.28□□□□□ -2.36
NPAS1Q99742 MIR6755-201ENST00000619993 66 ntBASIC0.28□□□□□ -2.36
NPAS1Q99742 AC010487.4-201ENST00000637027 61 ntBASIC0.28□□□□□ -2.36
NPAS1Q99742 MIR450A1-201ENST00000362262 91 ntBASIC0.27□□□□□ -2.37
NPAS1Q99742 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
NPAS1Q99742 SNORD110-201ENST00000408189 75 ntBASIC0.27□□□□□ -2.37
NPAS1Q99742 MIR2113-201ENST00000459007 91 ntBASIC0.27□□□□□ -2.37
NPAS1Q99742 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.27□□□□□ -2.37
NPAS1Q99742 RN7SL793P-201ENST00000583259 296 ntBASIC0.27□□□□□ -2.37
NPAS1Q99742 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.27□□□□□ -2.37
NPAS1Q99742 MIR924-201ENST00000638017 53 ntBASIC0.27□□□□□ -2.37
NPAS1Q99742 MIR617-201ENST00000385030 97 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 RNU6-887P-201ENST00000410660 100 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 RNA5SP484-201ENST00000458857 111 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 RNU6-848P-201ENST00000515948 107 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 RNU6-617P-201ENST00000516147 107 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 RNU6-473P-201ENST00000516164 107 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 RNU6-1049P-201ENST00000516414 107 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 SNORA70.25-201ENST00000612741 95 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 Y_RNA.818-201ENST00000618813 71 ntBASIC0.26□□□□□ -2.37
NPAS1Q99742 Y_RNA.93-201ENST00000363066 109 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 SNORD114-26-201ENST00000363543 72 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 Y_RNA.239-201ENST00000364444 113 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 RNY1P4-201ENST00000384595 115 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 Y_RNA.544-201ENST00000384650 113 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 RNU6-519P-201ENST00000410590 108 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.25□□□□□ -2.37
NPAS1Q99742 RNU7-61P-201ENST00000515897 61 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 AC069113.3-201ENST00000521019 150 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 MIR1273G-201ENST00000577677 100 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 MIR499B-201ENST00000636498 73 ntBASIC0.25□□□□□ -2.37
NPAS1Q99742 RNU6-664P-201ENST00000362381 107 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 SNORA63.4-201ENST00000362763 126 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 Y_RNA.207-201ENST00000364142 106 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 RNU6-215P-201ENST00000365169 102 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 RNA5SP128-201ENST00000365305 116 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 MIR519E-201ENST00000385075 84 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 RNU6-1232P-201ENST00000516299 86 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 RNA5SP480-201ENST00000516840 109 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 MIR4460-201ENST00000577862 86 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 MIR548AG2-201ENST00000581228 64 ntBASIC0.24□□□□□ -2.37
NPAS1Q99742 RNU1-141P-201ENST00000364623 158 ntBASIC0.23□□□□□ -2.37
NPAS1Q99742 AL035461.1-201ENST00000421490 332 ntBASIC0.23□□□□□ -2.37
NPAS1Q99742 RNU6-537P-201ENST00000517277 103 ntBASIC0.23□□□□□ -2.37
NPAS1Q99742 MIR4696-201ENST00000581431 70 ntBASIC0.23□□□□□ -2.37
NPAS1Q99742 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
NPAS1Q99742 RNU6-162P-201ENST00000516228 103 ntBASIC0.22□□□□□ -2.37
NPAS1Q99742 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
NPAS1Q99742 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
NPAS1Q99742 SNORD58A-201ENST00000383875 65 ntBASIC0.21□□□□□ -2.38
NPAS1Q99742 RNU6-652P-201ENST00000365488 107 ntBASIC0.2□□□□□ -2.38
NPAS1Q99742 Y_RNA.540-201ENST00000384638 111 ntBASIC0.2□□□□□ -2.38
NPAS1Q99742 MIR643-201ENST00000385267 97 ntBASIC0.2□□□□□ -2.38
NPAS1Q99742 MTRNR2L2-201ENST00000604882 87 ntBASIC0.2□□□□□ -2.38
NPAS1Q99742 MIR2052-201ENST00000636055 55 ntBASIC0.2□□□□□ -2.38
NPAS1Q99742 MIRLET7F1-201ENST00000362202 87 ntBASIC0.19□□□□□ -2.38
NPAS1Q99742 SNORD116-10-201ENST00000363791 102 ntBASIC0.19□□□□□ -2.38
NPAS1Q99742 RNU6-44P-201ENST00000384045 107 ntBASIC0.19□□□□□ -2.38
NPAS1Q99742 MIR7-2-201ENST00000384970 110 ntBASIC0.19□□□□□ -2.38
NPAS1Q99742 MIR548U-201ENST00000390728 81 ntBASIC0.19□□□□□ -2.38
NPAS1Q99742 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
NPAS1Q99742 RNU6-75P-201ENST00000515944 104 ntBASIC0.19□□□□□ -2.38
NPAS1Q99742 MIR371B-201ENST00000638082 66 ntBASIC0.19□□□□□ -2.38
NPAS1Q99742 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
NPAS1Q99742 RNU6-935P-201ENST00000410371 100 ntBASIC0.18□□□□□ -2.38
NPAS1Q99742 AC093423.1-201ENST00000440817 142 ntBASIC0.18□□□□□ -2.38
NPAS1Q99742 RNU7-85P-201ENST00000458851 63 ntBASIC0.18□□□□□ -2.38
NPAS1Q99742 YWHAEP2-201ENST00000580066 112 ntBASIC0.18□□□□□ -2.38
NPAS1Q99742 U7.3-201ENST00000616123 62 ntBASIC0.18□□□□□ -2.38
NPAS1Q99742 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.18□□□□□ -2.38
NPAS1Q99742 MIR216B-201ENST00000390186 82 ntBASIC0.17□□□□□ -2.38
NPAS1Q99742 RNU6-127P-201ENST00000390897 107 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms