Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 RNU6-647P-201ENST00000364243 107 ntBASIC-1.34□□□□□ -2.62
VAT1Q99536 SNORD114-17-201ENST00000364699 75 ntBASIC-1.34□□□□□ -2.62
VAT1Q99536 RNU6-985P-201ENST00000410182 104 ntBASIC-1.34□□□□□ -2.62
VAT1Q99536 MIR6844-201ENST00000637122 62 ntBASIC-1.34□□□□□ -2.62
VAT1Q99536 AL512310.12-203ENST00000640543 90 ntBASIC-1.34□□□□□ -2.62
VAT1Q99536 SNORD18B-201ENST00000365659 72 ntBASIC-1.35□□□□□ -2.63
VAT1Q99536 RNU6-24P-201ENST00000384440 107 ntBASIC-1.35□□□□□ -2.63
VAT1Q99536 RNA5SP470-201ENST00000516463 106 ntBASIC-1.35□□□□□ -2.63
VAT1Q99536 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.35□□□□□ -2.63
VAT1Q99536 MIR1302-6-201ENST00000408466 90 ntBASIC-1.36□□□□□ -2.63
VAT1Q99536 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.36□□□□□ -2.63
VAT1Q99536 AC107027.2-201ENST00000512197 115 ntBASIC-1.36□□□□□ -2.63
VAT1Q99536 RNU6-719P-201ENST00000516671 104 ntBASIC-1.36□□□□□ -2.63
VAT1Q99536 MIR3646-201ENST00000578301 84 ntBASIC-1.36□□□□□ -2.63
VAT1Q99536 AL160413.1-201ENST00000622780 310 ntBASIC-1.36□□□□□ -2.63
VAT1Q99536 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.37□□□□□ -2.63
VAT1Q99536 MIR548P-201ENST00000408336 84 ntBASIC-1.37□□□□□ -2.63
VAT1Q99536 snoU83B.1-201ENST00000517136 88 ntBASIC-1.37□□□□□ -2.63
VAT1Q99536 U6.104-201ENST00000637979 90 ntBASIC-1.37□□□□□ -2.63
VAT1Q99536 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.38□□□□□ -2.63
VAT1Q99536 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.38□□□□□ -2.63
VAT1Q99536 AC022028.1-201ENST00000412054 408 ntBASIC-1.38□□□□□ -2.63
VAT1Q99536 SNORD127-201ENST00000458892 86 ntBASIC-1.38□□□□□ -2.63
VAT1Q99536 MIR4464-201ENST00000580818 92 ntBASIC-1.38□□□□□ -2.63
VAT1Q99536 MIR548S-201ENST00000581352 82 ntBASIC-1.38□□□□□ -2.63
VAT1Q99536 YWHAEP3-201ENST00000582767 121 ntBASIC-1.38□□□□□ -2.63
VAT1Q99536 RNU6-363P-201ENST00000362895 105 ntBASIC-1.39□□□□□ -2.63
VAT1Q99536 SNORA62.4-201ENST00000365504 151 ntBASIC-1.39□□□□□ -2.63
VAT1Q99536 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.39□□□□□ -2.63
VAT1Q99536 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.39□□□□□ -2.63
VAT1Q99536 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.39□□□□□ -2.63
VAT1Q99536 RN7SKP19-201ENST00000516016 252 ntBASIC-1.39□□□□□ -2.63
VAT1Q99536 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.39□□□□□ -2.63
VAT1Q99536 MIR3171-201ENST00000584270 74 ntBASIC-1.39□□□□□ -2.63
VAT1Q99536 MIR8062-201ENST00000621515 85 ntBASIC-1.39□□□□□ -2.63
VAT1Q99536 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.4□□□□□ -2.63
VAT1Q99536 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.4□□□□□ -2.63
VAT1Q99536 MIR759-201ENST00000390224 91 ntBASIC-1.4□□□□□ -2.63
VAT1Q99536 FGF7P7-201ENST00000514120 227 ntBASIC-1.4□□□□□ -2.63
VAT1Q99536 MIR4306-201ENST00000583390 91 ntBASIC-1.4□□□□□ -2.63
VAT1Q99536 AC090617.8-201ENST00000623339 167 ntBASIC-1.4□□□□□ -2.63
VAT1Q99536 MIR3658-201ENST00000636291 56 ntBASIC-1.4□□□□□ -2.63
VAT1Q99536 RNU6-208P-201ENST00000362431 107 ntBASIC-1.41□□□□□ -2.64
VAT1Q99536 RNU6-495P-201ENST00000362995 107 ntBASIC-1.41□□□□□ -2.64
VAT1Q99536 RNU4-32P-201ENST00000363404 141 ntBASIC-1.41□□□□□ -2.64
VAT1Q99536 RNU6-990P-201ENST00000364385 104 ntBASIC-1.41□□□□□ -2.64
VAT1Q99536 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.41□□□□□ -2.64
VAT1Q99536 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.41□□□□□ -2.64
VAT1Q99536 RNA5SP266-201ENST00000410273 108 ntBASIC-1.41□□□□□ -2.64
VAT1Q99536 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.42□□□□□ -2.64
VAT1Q99536 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.42□□□□□ -2.64
VAT1Q99536 RNU6-918P-201ENST00000391219 106 ntBASIC-1.42□□□□□ -2.64
VAT1Q99536 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.42□□□□□ -2.64
VAT1Q99536 MIR3165-201ENST00000579874 75 ntBASIC-1.42□□□□□ -2.64
VAT1Q99536 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.43□□□□□ -2.64
VAT1Q99536 MIR548D2-201ENST00000384955 97 ntBASIC-1.43□□□□□ -2.64
VAT1Q99536 MTND2P23-201ENST00000422990 651 ntBASIC-1.43□□□□□ -2.64
VAT1Q99536 RNU6-238P-201ENST00000363313 106 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 RNA5SP192-201ENST00000364404 120 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 RNY3P14-201ENST00000384309 102 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 AC021146.9-201ENST00000512503 156 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 RNU6-635P-201ENST00000516651 102 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 AC020661.2-201ENST00000560114 134 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 AL353803.5-201ENST00000599815 141 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 AL442128.1-201ENST00000615151 90 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 AL445584.3-201ENST00000617173 78 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 AC025521.1-201ENST00000621624 286 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 MIR6888-201ENST00000621977 67 ntBASIC-1.44□□□□□ -2.64
VAT1Q99536 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.45□□□□□ -2.64
VAT1Q99536 RNU6-312P-201ENST00000364629 107 ntBASIC-1.45□□□□□ -2.64
VAT1Q99536 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.45□□□□□ -2.64
VAT1Q99536 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.45□□□□□ -2.64
VAT1Q99536 AC068339.1-201ENST00000526965 141 ntBASIC-1.45□□□□□ -2.64
VAT1Q99536 U6.96-201ENST00000636425 70 ntBASIC-1.45□□□□□ -2.64
VAT1Q99536 MIR4320-201ENST00000636981 65 ntBASIC-1.45□□□□□ -2.64
VAT1Q99536 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.46□□□□□ -2.64
VAT1Q99536 RNU6-409P-201ENST00000384114 104 ntBASIC-1.46□□□□□ -2.64
VAT1Q99536 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.46□□□□□ -2.64
VAT1Q99536 RNU2-38P-201ENST00000410856 79 ntBASIC-1.46□□□□□ -2.64
VAT1Q99536 RNU7-85P-201ENST00000458851 63 ntBASIC-1.46□□□□□ -2.64
VAT1Q99536 RNU6-65P-201ENST00000516332 98 ntBASIC-1.46□□□□□ -2.64
VAT1Q99536 MIR3121-201ENST00000579680 77 ntBASIC-1.46□□□□□ -2.64
VAT1Q99536 MIR4536-1-201ENST00000583537 88 ntBASIC-1.46□□□□□ -2.64
VAT1Q99536 MIR3140-201ENST00000583685 90 ntBASIC-1.46□□□□□ -2.64
VAT1Q99536 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.46□□□□□ -2.64
VAT1Q99536 SNORA63.2-201ENST00000362603 126 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 SNORD50.2-201ENST00000365465 70 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 RNU6-132P-201ENST00000383863 107 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 SNORA24B-201ENST00000384176 131 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 SNORD58.1-201ENST00000391313 66 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 RNU7-121P-201ENST00000516604 62 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 MIR3115-201ENST00000577915 68 ntBASIC-1.47□□□□□ -2.64
VAT1Q99536 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.48□□□□□ -2.65
VAT1Q99536 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms